BLASTX nr result
ID: Rehmannia25_contig00032654
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00032654
(344 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 61 1e-11
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 61 1e-11
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea] 60 8e-11
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 69 1e-10
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 54 5e-10
gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo... 67 3e-09
gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indi... 67 3e-09
gb|EAY75286.1| hypothetical protein OsI_03173 [Oryza sativa Indi... 67 3e-09
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar... 60 5e-09
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 60 9e-09
emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera] 65 9e-09
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304... 65 1e-08
gb|EMJ25991.1| hypothetical protein PRUPE_ppa023799mg, partial [... 64 2e-08
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 61 2e-08
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 61 2e-08
emb|CAN72053.1| hypothetical protein VITISV_031314 [Vitis vinifera] 64 3e-08
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 63 4e-08
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 63 4e-08
gb|EMJ10140.1| hypothetical protein PRUPE_ppb014848mg, partial [... 63 4e-08
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 63 4e-08
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 61.2 bits (147), Expect(2) = 1e-11
Identities = 27/62 (43%), Positives = 43/62 (69%)
Frame = +2
Query: 146 LKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTVCT 325
LKK+LA Y++EE+YW Q+SR KWL+ G++N+K+FHA Q R+ I ++ +G + T
Sbjct: 284 LKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQT 343
Query: 326 DK 331
+
Sbjct: 344 SE 345
Score = 33.9 bits (76), Expect(2) = 1e-11
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 3 KIRNCRMSLLSWNKGLGTNSAKNITQIKQAMDNQETL 113
++R CR SL SW K NS I Q++ A++ +++L
Sbjct: 237 RLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSL 273
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 61.2 bits (147), Expect(2) = 1e-11
Identities = 27/62 (43%), Positives = 43/62 (69%)
Frame = +2
Query: 146 LKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTVCT 325
LKK+LA Y++EE+YW Q+SR KWL+ G++N+K+FHA Q R+ I ++ +G + T
Sbjct: 287 LKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQT 346
Query: 326 DK 331
+
Sbjct: 347 SE 348
Score = 33.9 bits (76), Expect(2) = 1e-11
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 3 KIRNCRMSLLSWNKGLGTNSAKNITQIKQAMDNQETL 113
++R CR SL SW K NS I Q++ A++ +++L
Sbjct: 240 RLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSL 276
>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
Length = 381
Score = 60.5 bits (145), Expect(2) = 8e-11
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +2
Query: 146 LKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTVCT 325
L+K L YK EE++W +SRI+WL GD+N +FFHA + RR N IL + G
Sbjct: 123 LRKELLQAYKDEEAFWRNKSRIQWLTYGDRNIRFFHASTKNRRAKNKILSIQNNLGEEVF 182
Query: 326 DKREI 340
+EI
Sbjct: 183 GNKEI 187
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 3 KIRNCRMSLLSWNKGLGTNSAKNITQIKQAMD 98
+IR CR ++ W K TNSAK I + +D
Sbjct: 76 RIRKCRHAISQWKKAKNTNSAKRIKALTALID 107
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 68.9 bits (167), Expect(2) = 1e-10
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +2
Query: 140 AELKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTV 319
A LKK L+ EY EE +W ++SRI W++ GD+NTK+FHA + RR N I +++ +G
Sbjct: 319 ARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGRE 378
Query: 320 CTDKREI 340
T ++
Sbjct: 379 WTSDEDL 385
Score = 22.3 bits (46), Expect(2) = 1e-10
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +3
Query: 3 KIRNCRMSLLSWNKGLGTNSAKNITQIKQAMD 98
KI +CR + W + +SA I +++ +D
Sbjct: 274 KIASCRREISKWKRVSKPSSAVRIQELQFKLD 305
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 53.5 bits (127), Expect(2) = 5e-10
Identities = 24/64 (37%), Positives = 40/64 (62%)
Frame = +2
Query: 125 DWTLWAELKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVL 304
D +L + + L + Y++EE +W Q SR++WL GD+N +FHA + RR N++ V+
Sbjct: 255 DPSLIGSITQELEAAYRQEELFWKQWSRVQWLNSGDRNKGYFHATTRTRRMLNNL--SVI 312
Query: 305 RDGT 316
DG+
Sbjct: 313 EDGS 316
Score = 35.8 bits (81), Expect(2) = 5e-10
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 3 KIRNCRMSLLSWNKGLGTNSAKNITQIKQAMDNQETLGVIEIGLCG 140
KI CR S++ W K +NSAK I + +QA+++ + + + L G
Sbjct: 215 KISRCRQSIIKWTKEQNSNSAKAIKKAQQALESALSADIPDPSLIG 260
>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
Length = 1049
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +2
Query: 146 LKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTVCT 325
L++ L +++EE Q SRI+WLKEGD+NT FFHA ++ RRRTN I +V DG+ C+
Sbjct: 61 LEQQLCDLFEREEIMAKQRSRIEWLKEGDRNTSFFHARASARRRTNKIKLLVRDDGSSCS 120
Query: 326 DKREIE 343
+ + I+
Sbjct: 121 ESQGIK 126
>gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indica Group]
Length = 995
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +2
Query: 146 LKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTVCT 325
L++ L +++EE Q SRI+WLKEGD+NT FFHA ++ RRRTN I +V DG+ C+
Sbjct: 61 LEQRLCDLFEREEIMAKQRSRIEWLKEGDRNTSFFHARASARRRTNKIKLLVRDDGSSCS 120
Query: 326 DKREIE 343
+ + I+
Sbjct: 121 ESQGIK 126
>gb|EAY75286.1| hypothetical protein OsI_03173 [Oryza sativa Indica Group]
Length = 157
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +2
Query: 146 LKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTVCT 325
L++ L +++EE Q SRI+WLKEGD+NT FFHA ++ RRRTN I +V DG+ C+
Sbjct: 46 LEQQLCDLFEREEIMAKQRSRIEWLKEGDRNTSFFHARASARRRTNKIKLLVRDDGSSCS 105
Query: 326 DKREIE 343
+ + I+
Sbjct: 106 ESQGIK 111
>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis
thaliana] gi|7267156|emb|CAB77868.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 1077
Score = 59.7 bits (143), Expect(2) = 5e-09
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +2
Query: 146 LKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTVCT 325
L +NL Y+KEE++W Q SR WL GDKN+ FFHA +N RR N+I + GT
Sbjct: 297 LNQNLLLAYRKEETFWKQRSRNLWLALGDKNSCFFHAATNSRRAINTISVIENSAGTSVY 356
Query: 326 DKREI 340
+ EI
Sbjct: 357 EDSEI 361
Score = 26.2 bits (56), Expect(2) = 5e-09
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 3 KIRNCRMSLLSWNKGLGTNSAKNITQIKQAMDNQET 110
++ CR +LL+W+K NS K I ++ ++ T
Sbjct: 250 RLHLCRAALLNWSKEHHLNSQKEILSLRVQLEEALT 285
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 59.7 bits (143), Expect(2) = 9e-09
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +2
Query: 143 ELKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSI 289
EL L Y+ EE YW+Q+SR W+K GD N+KFFHA + QRR N I
Sbjct: 104 ELTLRLKEAYRDEEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRI 152
Score = 25.4 bits (54), Expect(2) = 9e-09
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 3 KIRNCRMSLLSWNKGLGTNSAKNITQIKQAMD 98
K+ NCR ++ W K L + I +K +D
Sbjct: 58 KLTNCRRAISKWRKSLIPFGRQTIEDLKAELD 89
>emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera]
Length = 1851
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Frame = +2
Query: 143 ELKKNLASEYKK----EESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRD 310
ELKK YKK EES+W Q SR WLKEGDKNT FFH +N R NS+ R+ + D
Sbjct: 1067 ELKKEAKESYKKWVLLEESHWRQLSREVWLKEGDKNTGFFHRMANAHRNNNSLDRIKI-D 1125
Query: 311 GTVCTDKREI 340
G +++E+
Sbjct: 1126 GVWLVEEQEV 1135
>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
subsp. vesca]
Length = 1687
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +2
Query: 119 NRDWTLWAELKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRV 298
NR + AEL K+L + EES W Q SRI WL+EGD+NTKFFH F+ R R N +L +
Sbjct: 320 NRRNAIVAELNKSL----EIEESIWRQRSRINWLQEGDRNTKFFHGFAKGRGRKNRVLGI 375
Query: 299 VLRDGTVCTDKREIE 343
+ G + EI+
Sbjct: 376 MSSTGEWIEQETEIQ 390
>gb|EMJ25991.1| hypothetical protein PRUPE_ppa023799mg, partial [Prunus persica]
Length = 374
Score = 64.3 bits (155), Expect = 2e-08
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = +2
Query: 146 LKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSI 289
L+K+L +E +KEE YW +SR++WL+EGDKNTKFFH+ + RRR N +
Sbjct: 68 LEKDLKTELQKEEQYWKLKSRVEWLQEGDKNTKFFHSKTVSRRRINRL 115
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 61.2 bits (147), Expect(2) = 2e-08
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +2
Query: 140 AELKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTV 319
+ +++ L Y+ EE YW Q+SR +W+KEGD+NT+FFHA + R N ++ + +G +
Sbjct: 701 SHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMI 760
Query: 320 CTDKREI 340
+EI
Sbjct: 761 YRGDKEI 767
Score = 22.3 bits (46), Expect(2) = 2e-08
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 3 KIRNCRMSLLSWNKGLGTNSAKNITQIKQAMD 98
++R CR ++ NS I Q++ A+D
Sbjct: 655 QVRTCRQAMAKLKHKSNLNSRIRINQLQAALD 686
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 61.2 bits (147), Expect(2) = 2e-08
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +2
Query: 140 AELKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTV 319
+ +++ L Y+ EE YW Q+SR +W+KEGD+NT+FFHA + R N ++ + +G +
Sbjct: 681 SHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMI 740
Query: 320 CTDKREI 340
+EI
Sbjct: 741 YRGDKEI 747
Score = 22.3 bits (46), Expect(2) = 2e-08
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 3 KIRNCRMSLLSWNKGLGTNSAKNITQIKQAMD 98
++R CR ++ NS I Q++ A+D
Sbjct: 635 QVRTCRQAMAKLKHKSNLNSRIRINQLQAALD 666
>emb|CAN72053.1| hypothetical protein VITISV_031314 [Vitis vinifera]
Length = 780
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Frame = +2
Query: 146 LKKNLASEYKK----EESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDG 313
L+K EYKK EE+ W Q+SR WL+EGD+NT FFH +N +R NS++++ + +G
Sbjct: 231 LRKQALEEYKKLVIMEETSWRQKSRELWLREGDRNTGFFHKMANAHKRVNSLVKIKI-NG 289
Query: 314 TVCTDKREIE 343
+ T++R+I+
Sbjct: 290 SWVTEERDIK 299
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +2
Query: 179 EESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTVCTDKREIE 343
EE YW Q SR +WLKEGD+NTK+FH+ ++ RRR N I + G D+RE+E
Sbjct: 308 EEIYWRQRSRAEWLKEGDRNTKYFHSKASARRRKNKIWGIENSHGQWTEDQREVE 362
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = +2
Query: 146 LKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTVCT 325
L+K L K++++W Q SR+ WL EGD NTKFFH ++ R++ N++ + DG C
Sbjct: 105 LEKELQDLLHKKQTFWQQRSRVLWLAEGDLNTKFFHQRASNRKKKNTLKGLFNEDGVWCN 164
Query: 326 DKREIE 343
D+ E+E
Sbjct: 165 DECEME 170
>gb|EMJ10140.1| hypothetical protein PRUPE_ppb014848mg, partial [Prunus persica]
Length = 474
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 143 ELKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRV 298
E+K L +KK E +W Q SR++WLKEGD NT+FFH + QRR+ N +LR+
Sbjct: 156 EIKGELHQLWKKNELFWKQRSRVQWLKEGDANTRFFHLTTIQRRQRNRVLRL 207
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/66 (43%), Positives = 43/66 (65%)
Frame = +2
Query: 146 LKKNLASEYKKEESYWHQESRIKWLKEGDKNTKFFHAFSNQRRRTNSILRVVLRDGTVCT 325
+++ L ++KEE Q SR+ WL+EGD+NT FFHA ++ RRRTN I +V DG+ C
Sbjct: 337 IEQQLCELFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCI 396
Query: 326 DKREIE 343
+ I+
Sbjct: 397 SQEGIK 402