BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00032574
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...   217   1e-54
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...   217   1e-54
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   217   1e-54
gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis c...   216   2e-54
gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halle...   216   2e-54
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle...   216   3e-54
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle...   216   3e-54
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         215   4e-54
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   215   4e-54
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle...   215   6e-54
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   215   6e-54
gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle...   214   1e-53
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         214   1e-53
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   214   1e-53
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...   214   1e-53
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle...   214   1e-53
gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis c...   213   2e-53
gb|AFK88552.1| reverse transcriptase, partial [Arabidopsis halle...   213   2e-53
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle...   213   2e-53
gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wal...   212   4e-53

>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  217 bits (553), Expect = 1e-54
 Identities = 105/136 (77%), Positives = 116/136 (85%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYKARLVAKGYSQRAGIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 48  AKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  217 bits (553), Expect = 1e-54
 Identities = 105/136 (77%), Positives = 116/136 (85%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYKARLVAKGYSQRAGIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 48  AKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  217 bits (553), Expect = 1e-54
 Identities = 105/136 (77%), Positives = 116/136 (85%)
 Frame = +1

Query: 1    AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
            AKKN+KGE+ERYKARLVAKGYSQRAGIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 855  AKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 914

Query: 181  VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
            VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 915  VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 974

Query: 361  ITKCPHEHALYVKVRK 408
              KCP+EHALY+K++K
Sbjct: 975  FIKCPYEHALYIKIQK 990


>gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 286

 Score =  216 bits (551), Expect = 2e-54
 Identities = 105/136 (77%), Positives = 115/136 (84%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYKARLVAKGYSQRAGIDYDEVFAPVARLET+RLIISLAAQN WKIHQMD
Sbjct: 48  AKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNEWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIIKGEEDKVLKLKKALYGLKQAPRAWNTRIDKYFKEKD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  216 bits (551), Expect = 2e-54
 Identities = 105/136 (77%), Positives = 116/136 (85%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYKARLVAKGYSQRAGIDYDEVFAPVA LET+RLIISLAAQN+WKIHQMD
Sbjct: 48  AKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVACLETVRLIISLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEENKVLRLNKALYGLKQAPRAWNTRIDKYFKEKD 167

Query: 361 ITKCPHEHALYVKVRK 408
            TKCP+EHALY+K++K
Sbjct: 168 FTKCPYEHALYIKIQK 183


>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  216 bits (550), Expect = 3e-54
 Identities = 104/136 (76%), Positives = 116/136 (85%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYKARLVAKGYSQRAGIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 48  AKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPR+WN+RIDKY +E  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRSWNTRIDKYFKEKD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  216 bits (549), Expect = 3e-54
 Identities = 104/136 (76%), Positives = 115/136 (84%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYKARLVAKGYSQRAGIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 48  AKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKS FLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSTFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  215 bits (548), Expect = 4e-54
 Identities = 103/136 (75%), Positives = 115/136 (84%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYKARLVAKGYSQRAGIDYDE+FAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 384 AKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMD 443

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY               LYGLKQAPRAWN+RIDKY +E  
Sbjct: 444 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKD 503

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 504 FIKCPYEHALYIKIQK 519


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  215 bits (548), Expect = 4e-54
 Identities = 103/136 (75%), Positives = 115/136 (84%)
 Frame = +1

Query: 1    AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
            AKKN+KGE+ERYKARLVAKGYSQRAGIDYDE+FAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 887  AKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMD 946

Query: 181  VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
            VKSAFLNG LEEEVYIEQP+GY               LYGLKQAPRAWN+RIDKY +E  
Sbjct: 947  VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKD 1006

Query: 361  ITKCPHEHALYVKVRK 408
              KCP+EHALY+K++K
Sbjct: 1007 FIKCPYEHALYIKIQK 1022


>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  215 bits (547), Expect = 6e-54
 Identities = 104/136 (76%), Positives = 115/136 (84%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYKARLVAKGYSQRAGIDYDEVFAPVARLET+RLII LAAQN+WKIHQMD
Sbjct: 48  AKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIILLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  215 bits (547), Expect = 6e-54
 Identities = 104/136 (76%), Positives = 115/136 (84%)
 Frame = +1

Query: 1    AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
            AKKN+KGE+ERYKARLVAKGY QRAGIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 887  AKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 946

Query: 181  VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
            VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 947  VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 1006

Query: 361  ITKCPHEHALYVKVRK 408
              KCP+EHALY+K++K
Sbjct: 1007 FIKCPYEHALYIKIQK 1022


>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  214 bits (545), Expect = 1e-53
 Identities = 103/136 (75%), Positives = 114/136 (83%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYKARLVAKGYSQR GIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 48  AKKNSKGEVERYKARLVAKGYSQRTGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG  EEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSAFLNGDFEEEVYIEQPQGYIVKGEENKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  214 bits (545), Expect = 1e-53
 Identities = 103/136 (75%), Positives = 114/136 (83%)
 Frame = +1

Query: 1    AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
            AKKN+KGE+ERYKARLVAKGYSQR GIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 887  AKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 946

Query: 181  VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
            VKSAFLNG LEEEVYIEQP+GY               LYGLKQAPRAWN+RIDKY +E  
Sbjct: 947  VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKD 1006

Query: 361  ITKCPHEHALYVKVRK 408
              KCP+EHALY+K++K
Sbjct: 1007 FIKCPYEHALYIKIQK 1022


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  214 bits (545), Expect = 1e-53
 Identities = 103/136 (75%), Positives = 114/136 (83%)
 Frame = +1

Query: 1    AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
            AKKN+KGE+ERYKARLVAKGYSQR GIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 887  AKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 946

Query: 181  VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
            VKSAFLNG LEEEVYIEQP+GY               LYGLKQAPRAWN+RIDKY +E  
Sbjct: 947  VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKD 1006

Query: 361  ITKCPHEHALYVKVRK 408
              KCP+EHALY+K++K
Sbjct: 1007 FIKCPYEHALYIKIQK 1022


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  214 bits (544), Expect = 1e-53
 Identities = 103/136 (75%), Positives = 116/136 (85%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYKARLVAKGYSQRAGIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 48  AKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RI+KY ++  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRINKYFKKKD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  214 bits (544), Expect = 1e-53
 Identities = 103/136 (75%), Positives = 114/136 (83%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYK RLVAKGY QRAGIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 48  AKKNSKGEVERYKGRLVAKGYCQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 315

 Score =  213 bits (543), Expect = 2e-53
 Identities = 104/136 (76%), Positives = 115/136 (84%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ER+KARLVAKGYSQRAGIDYDEVFAPVARLET+RLIISLAAQN WKIHQMD
Sbjct: 48  AKKNSKGEVERHKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNVWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEAKVLKLKKALYGLKQAPRAWNTRIDKYFKEQD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>gb|AFK88552.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  213 bits (543), Expect = 2e-53
 Identities = 104/136 (76%), Positives = 114/136 (83%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN KGE+ERYKARLVAKGYSQRAGIDYDEVFAPVA LET+RLIISLAAQN+WKIHQMD
Sbjct: 48  AKKNPKGEVERYKARLVAKGYSQRAGIDYDEVFAPVACLETVRLIISLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEENKVLRLNKALYGLKQAPRAWNTRIDKYFKEKD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  213 bits (543), Expect = 2e-53
 Identities = 102/136 (75%), Positives = 114/136 (83%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYK RLVAKGY QRAGIDYDEVFAP+ARLET+RLIISLAAQN+WKIHQMD
Sbjct: 48  AKKNSKGEVERYKGRLVAKGYCQRAGIDYDEVFAPIARLETVRLIISLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY              ALYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 167

Query: 361 ITKCPHEHALYVKVRK 408
             KCP+EHALY+K++K
Sbjct: 168 FIKCPYEHALYIKIQK 183


>gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wallichii]
          Length = 315

 Score =  212 bits (540), Expect = 4e-53
 Identities = 102/135 (75%), Positives = 114/135 (84%)
 Frame = +1

Query: 1   AKKNAKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMD 180
           AKKN+KGE+ERYKARLVAKGYSQ+AGIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD
Sbjct: 48  AKKNSKGEVERYKARLVAKGYSQKAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMD 107

Query: 181 VKSAFLNGVLEEEVYIEQPKGYXXXXXXXXXXXXXXALYGLKQAPRAWNSRIDKYLQENG 360
           VKSAFLNG LEEEVYIEQP+GY               LYGLKQAPRAWN+RIDKY +E  
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKTLYGLKQAPRAWNTRIDKYFKEKK 167

Query: 361 ITKCPHEHALYVKVR 405
             KCP+EHALY+K++
Sbjct: 168 FIKCPYEHALYIKIQ 182