BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00032395
         (451 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily p...    69   8e-10
emb|CBI22375.3| unnamed protein product [Vitis vinifera]               64   3e-08
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]    64   3e-08
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu...    61   1e-07
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,...    60   3e-07
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06

>gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 586

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = -3

Query: 263 FFTQHNK-LSTRKSHKNSVFRCSNQIEXXXXXXXXXXXXXXVSTDTKPTHLPTYNGFKEA 87
           F TQ  K  S   SH  S+  C N                 VS +T+PTHL +++ FKE 
Sbjct: 15  FTTQQLKPTSNSHSHHTSLVSCLNHESQDSSSKSRNNQKVRVSAETRPTHLLSFD-FKET 73

Query: 86  HFVKLLHRSCKAGNYDEGLYFLECMV 9
           H +KLL+RSCKAG Y+E  YFLECMV
Sbjct: 74  HLMKLLNRSCKAGKYNEAFYFLECMV 99


>emb|CBI22375.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = -3

Query: 236 TRKSHKNSVFRCSNQIEXXXXXXXXXXXXXXVSTDTKPTHLPTYNGFKEAHFVKLLHRSC 57
           T  SH  S+  C N                 VS + +P HL +Y+ F+E H +KLL+RSC
Sbjct: 22  TSHSHHTSIVTCRNP-NPNDGFNSRNAPKVGVSAEARPAHLQSYD-FRETHLMKLLNRSC 79

Query: 56  KAGNYDEGLYFLECMVN 6
           KAG ++E LYFLEC+VN
Sbjct: 80  KAGKFNESLYFLECLVN 96


>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = -3

Query: 236 TRKSHKNSVFRCSNQIEXXXXXXXXXXXXXXVSTDTKPTHLPTYNGFKEAHFVKLLHRSC 57
           T  SH  S+  C N                 VS + +P HL +Y+ F+E H +KLL+RSC
Sbjct: 22  TSHSHHTSIVTCRNP-NPNDGFNSRNAPKVGVSAEARPAHLQSYD-FRETHLMKLLNRSC 79

Query: 56  KAGNYDEGLYFLECMVN 6
           KAG ++E LYFLEC+VN
Sbjct: 80  KAGKFNESLYFLECLVN 96


>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = -3

Query: 236 TRKSHKNSVFRCSNQIEXXXXXXXXXXXXXXVSTDTKPTHLPTYNGFKEAHFVKLLHRSC 57
           T  SH  S+  C N                 VS + +P HL +Y+ F+E H +KLL+RSC
Sbjct: 32  TSHSHHTSIVTCRNP-NPNDGYNSRNSPKVGVSAEARPAHLQSYD-FRETHLMKLLNRSC 89

Query: 56  KAGNYDEGLYFLECMVN 6
           KAG ++E LYFLEC+VN
Sbjct: 90  KAGKFNESLYFLECLVN 106


>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
           gi|550316702|gb|ERP48891.1| hypothetical protein
           POPTR_0019s03630g [Populus trichocarpa]
          Length = 586

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/42 (66%), Positives = 35/42 (83%)
 Frame = -3

Query: 134 DTKPTHLPTYNGFKEAHFVKLLHRSCKAGNYDEGLYFLECMV 9
           +TKPTH+ +Y+ FKE H +KLL+RSCKAG  +E LYFLECMV
Sbjct: 60  ETKPTHVLSYD-FKETHLMKLLNRSCKAGKCNESLYFLECMV 100


>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/88 (39%), Positives = 52/88 (59%)
 Frame = -3

Query: 269 VSFFTQHNKLSTRKSHKNSVFRCSNQIEXXXXXXXXXXXXXXVSTDTKPTHLPTYNGFKE 90
           +SF TQ  K ++   H +++  C    E              VS +T+ TH+ +++ FKE
Sbjct: 13  ISFTTQPLKPTSNSLH-STIVSCIRP-ELNDANKVRNPQKVRVSAETRQTHVLSFD-FKE 69

Query: 89  AHFVKLLHRSCKAGNYDEGLYFLECMVN 6
            H +KLL+RSC+AG Y+E LYFLECMV+
Sbjct: 70  VHLMKLLNRSCRAGKYNESLYFLECMVD 97


>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 586

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = -3

Query: 299 HLFMLSSFLKVSFFTQH-NKLSTRKSHKNSVFRCSNQIEXXXXXXXXXXXXXXVSTDTKP 123
           H F  +S LK +  + H   LS R S  +S+    N                  S + K 
Sbjct: 11  HSFHTTSQLKPTSHSHHPTALSCRASSASSISNGRNSSRNPTRVSV--------SAEPKS 62

Query: 122 THLPTYNGFKEAHFVKLLHRSCKAGNYDEGLYFLECMVN 6
           T L  Y+ FK+ H +K+L+RSCKAG Y+E +YFLE MVN
Sbjct: 63  TQLQNYD-FKDTHLMKVLNRSCKAGQYNEAIYFLELMVN 100