BLASTX nr result

ID: Rehmannia25_contig00032388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00032388
         (443 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC16426.1| Zinc finger protein [Morus notabilis]                   92   9e-17
gb|EOY01085.1| Ran BP2/NZF zinc finger-like superfamily protein,...    84   3e-14
ref|XP_002314789.2| hypothetical protein POPTR_0010s11770g [Popu...    79   8e-13
gb|EMJ24085.1| hypothetical protein PRUPE_ppa003582mg [Prunus pe...    74   3e-11
ref|XP_006469241.1| PREDICTED: zinc finger protein VAR3, chlorop...    72   1e-10
ref|XP_006469240.1| PREDICTED: zinc finger protein VAR3, chlorop...    72   1e-10
ref|XP_006448176.1| hypothetical protein CICLE_v10017484mg, part...    72   1e-10
ref|XP_002525990.1| protein with unknown function [Ricinus commu...    72   1e-10
ref|XP_004298511.1| PREDICTED: uncharacterized protein LOC101306...    71   2e-10
ref|XP_006351065.1| PREDICTED: zinc finger protein VAR3, chlorop...    60   4e-07
ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264...    60   4e-07
ref|XP_004244772.1| PREDICTED: zinc finger protein VAR3, chlorop...    59   5e-07

>gb|EXC16426.1| Zinc finger protein [Morus notabilis]
          Length = 338

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 50/101 (49%), Positives = 64/101 (63%)
 Frame = +3

Query: 141 LKSLFQNPNLFLPISHIHNPTSKNPSLNNPAIQFILDEVQEFQSSKTQFNSPVQKEDQEI 320
           L++ F N  +  PIS  H   SKNP  +NP + F+L EV+E QSSK +  + V + + E 
Sbjct: 16  LRNYFNNSKILSPISRFHG-RSKNPG-SNPKLDFVLGEVEELQSSKPE--TGVAQSEPEP 71

Query: 321 LPQKQHRDFSSVQITHPWGEWVDLMERLLKDGYFDEVGNPF 443
             + +  D  SVQI+HPW EWVDLME LLK GYFD  GNPF
Sbjct: 72  ESESESDDERSVQISHPWPEWVDLMECLLKRGYFDGDGNPF 112


>gb|EOY01085.1| Ran BP2/NZF zinc finger-like superfamily protein, putative
           [Theobroma cacao]
          Length = 542

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
 Frame = +3

Query: 126 FCLKALKSLFQNP---NLFLPISHIHNPTSKNPSLNNPAIQFILDEVQEFQSSKT----- 281
           F   ALK+ F+NP   N+ +PIS+IHN T       N  +  + DE+ E QSSK+     
Sbjct: 11  FLYPALKTHFENPEFPNILIPISYIHNSTKTLRP--NSKLDVVFDELDELQSSKSIPHSA 68

Query: 282 QFNSPVQKEDQEILPQKQHRDFSSVQITHPWGEWVDLMERLLKDGYFDEVGNPF 443
           Q  S +     +  P K  R+ S+V I+HPW EWVDLME LLK GYFD  GNPF
Sbjct: 69  QSPSGIDVPFDQRRPTK--RNESTVLISHPWQEWVDLMEFLLKRGYFDGDGNPF 120


>ref|XP_002314789.2| hypothetical protein POPTR_0010s11770g [Populus trichocarpa]
           gi|550329598|gb|EEF00960.2| hypothetical protein
           POPTR_0010s11770g [Populus trichocarpa]
          Length = 510

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
 Frame = +3

Query: 138 ALKSLFQNPNLFLPISHIHNPTSKNPSLNNPAIQFILDEVQEFQSSK-----TQFNSPVQ 302
           ++KS ++NP   LPISH+H+  SK   L+     FI +EV+   SSK      Q  S   
Sbjct: 15  SIKSCYKNPKFLLPISHLHS-FSKTQDLD-----FIFEEVEVLDSSKPTNQKNQLPSKTN 68

Query: 303 KEDQEILPQKQHRDFSSVQITHPWGEWVDLMERLLKDGYFDEVGNP 440
           +   +  P ++    S+VQI+HPW EWVDLME LLK GYF+  GNP
Sbjct: 69  EPSDDSHPSERME--STVQISHPWPEWVDLMELLLKRGYFEAGGNP 112


>gb|EMJ24085.1| hypothetical protein PRUPE_ppa003582mg [Prunus persica]
          Length = 564

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 46/109 (42%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
 Frame = +3

Query: 141 LKSLFQNPNLFLPISHIHNPTSKNPSLNNPAIQFILDEVQEFQSSKTQFNSPVQKEDQEI 320
           L+  FQNP   +PIS  H+ +       NP + FI++EV+E QSSK   + P  K  Q  
Sbjct: 16  LRIHFQNPEFLIPISQFHSLSETLAP--NPKLDFIVNEVKELQSSKD--SKPTYKITQLA 71

Query: 321 LPQKQHRDFSS--------VQITHPWGEWVDLMERLLKDGYFDEVGNPF 443
                  D  S        VQI+HPW EWV+LME LLK GYF+   NPF
Sbjct: 72  SDTDDPSDRGSLTNVEDCTVQISHPWREWVELMECLLKRGYFEGDENPF 120


>ref|XP_006469241.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like isoform X2
           [Citrus sinensis]
          Length = 382

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
 Frame = +3

Query: 147 SLFQNPNLFLPISHIHNPTSKNPSLNNPAIQFILDEVQEFQSSKT-----QFNSPVQKED 311
           +L +NP    PIS++HN T      + P   F+ +E++E +SSK+     Q +S  ++  
Sbjct: 15  ALKRNPKCLTPISYLHNSTKTLDPDSRPG--FVFNELEELESSKSTNQDAQRSSETKETS 72

Query: 312 QEILPQKQHRDFSSVQITHPWGEWVDLMERLLKDGYFDEVGNPF 443
             I P K     S VQI+H W EWV+LME L+K GYF+  GNPF
Sbjct: 73  NLIGPSKGFE--SKVQISHLWPEWVELMECLIKRGYFNADGNPF 114


>ref|XP_006469240.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like isoform X1
           [Citrus sinensis]
          Length = 456

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
 Frame = +3

Query: 147 SLFQNPNLFLPISHIHNPTSKNPSLNNPAIQFILDEVQEFQSSKT-----QFNSPVQKED 311
           +L +NP    PIS++HN T      + P   F+ +E++E +SSK+     Q +S  ++  
Sbjct: 15  ALKRNPKCLTPISYLHNSTKTLDPDSRPG--FVFNELEELESSKSTNQDAQRSSETKETS 72

Query: 312 QEILPQKQHRDFSSVQITHPWGEWVDLMERLLKDGYFDEVGNPF 443
             I P K     S VQI+H W EWV+LME L+K GYF+  GNPF
Sbjct: 73  NLIGPSKGFE--SKVQISHLWPEWVELMECLIKRGYFNADGNPF 114


>ref|XP_006448176.1| hypothetical protein CICLE_v10017484mg, partial [Citrus clementina]
           gi|557550787|gb|ESR61416.1| hypothetical protein
           CICLE_v10017484mg, partial [Citrus clementina]
          Length = 422

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
 Frame = +3

Query: 147 SLFQNPNLFLPISHIHNPTSKNPSLNNPAIQFILDEVQEFQSSKT-----QFNSPVQKED 311
           +L +NP    PIS++HN T      + P   F+ +E++E +SSK+     Q +S  ++  
Sbjct: 15  ALKRNPKCLTPISYLHNSTKTLDPDSRPG--FVFNELEELESSKSTNQDAQRSSETKETS 72

Query: 312 QEILPQKQHRDFSSVQITHPWGEWVDLMERLLKDGYFDEVGNPF 443
             I P K     S VQI+H W EWV+LME L+K GYF+  GNPF
Sbjct: 73  NLIGPSKGFE--SKVQISHLWPEWVELMECLIKRGYFNADGNPF 114


>ref|XP_002525990.1| protein with unknown function [Ricinus communis]
           gi|223534722|gb|EEF36414.1| protein with unknown
           function [Ricinus communis]
          Length = 557

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 49/107 (45%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
 Frame = +3

Query: 141 LKSLFQNPNLFLPISHIHNPTSK--NPSLNNPAIQFILDEVQEFQSSK--TQFNSPVQKE 308
           L++  + PN  LPIS   +  SK  NPS N   + F+ +EV+   SSK  +Q   P  K 
Sbjct: 16  LRTYSKIPNFLLPISQQLHSISKTLNPSSN---LDFVFNEVKALNSSKPTSQLAHPSSKA 72

Query: 309 DQEILPQKQH--RDFSSVQITHPWGEWVDLMERLLKDGYFDEVGNPF 443
           + EI     H  R+ S VQI+HPW EWVDLME LLK GYF+   NPF
Sbjct: 73  N-EISGYGNHTKRNDSVVQISHPWPEWVDLMEFLLKRGYFEANENPF 118


>ref|XP_004298511.1| PREDICTED: uncharacterized protein LOC101306134 [Fragaria vesca
           subsp. vesca]
          Length = 971

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
 Frame = +3

Query: 159 NPNLFLPISHIHNPTSKNPSLNNPAIQFILDEVQEFQSSK--TQFNSPVQKEDQEILPQK 332
           NP   +PIS  H   S      NP +QF++++VQE +S+    +F S     D+      
Sbjct: 14  NPTFLIPISQFH--ISSRTLAPNPKLQFVVNQVQELRSTNPTNEFVSASSDSDEP----- 66

Query: 333 QHRDFSSVQITHPWGEWVDLMERLLKDGYFDEVGNPF 443
               + +VQI+HPW EWVDLME LLK GYF+   NPF
Sbjct: 67  -SGLYCAVQISHPWREWVDLMELLLKRGYFEGDENPF 102


>ref|XP_006351065.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Solanum
           tuberosum]
          Length = 480

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/85 (41%), Positives = 46/85 (54%)
 Frame = +3

Query: 189 IHNPTSKNPSLNNPAIQFILDEVQEFQSSKTQFNSPVQKEDQEILPQKQHRDFSSVQITH 368
           I N +  N    N AIQFIL+E +  QS +T      Q E+ E       +  S +Q   
Sbjct: 18  IQNCSISNFHTKNSAIQFILEEGKTLQSQQTT----KQNEEAEF----SRKPNSGIQTPQ 69

Query: 369 PWGEWVDLMERLLKDGYFDEVGNPF 443
            W EWV+LM++LLK GYF+  GNPF
Sbjct: 70  LWPEWVNLMDKLLKTGYFEGFGNPF 94


>ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264495 [Vitis vinifera]
          Length = 528

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 44/98 (44%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
 Frame = +3

Query: 153 FQNPNLFLPISHIHNPTSKNPSLNNPAIQFILDEVQEFQSSKTQFNSPVQKEDQEILPQK 332
           F  P  F PISH H+P S+ P L +  ++F LDE+ E   S T   +P       I P K
Sbjct: 20  FSAPRFFSPISHFHSP-SETP-LPDSKLEF-LDELDESPPS-TVHGAP----SDWISPTK 71

Query: 333 QHRDFSSVQITHPWGEWVDLMERLLKDGYFDE-VGNPF 443
                S+V+  HPW EWVDLME L K GY +E  GNPF
Sbjct: 72  -----STVRHLHPWPEWVDLMEILTKKGYLEEGDGNPF 104


>ref|XP_004244772.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Solanum
           lycopersicum]
          Length = 480

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
 Frame = +3

Query: 141 LKSLFQNPNLFLPISHIHNPTS-KNPSLNNPAIQFILDEVQEFQSSKTQFNSPVQKEDQE 317
           LK +F + N  +  S I    S  N    N AIQF+L+E +  QS +T       K+++E
Sbjct: 2   LKMIFASSNKIIQNSSISISISISNFHTKNSAIQFVLEEGKTLQSQQTT------KQNEE 55

Query: 318 ILPQKQHRDFSSVQITHPWGEWVDLMERLLKDGYFDEVGNPF 443
           +  +   +  S +Q    W EWV+LM++LLK G FD  GNPF
Sbjct: 56  V--EFSRKPNSGIQTPQLWPEWVNLMDKLLKMGCFDGFGNPF 95


Top