BLASTX nr result
ID: Rehmannia25_contig00032387
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00032387
(339 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ... 44 6e-08
gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indi... 42 4e-07
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S... 44 7e-07
ref|XP_003622120.1| Pentatricopeptide repeat-containing protein ... 41 1e-06
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 46 2e-06
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo... 46 2e-06
gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ... 42 3e-06
ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [S... 40 4e-06
ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [S... 46 5e-06
gb|EMS51173.1| hypothetical protein TRIUR3_15210 [Triticum urartu] 43 1e-05
>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 355
Score = 43.5 bits (101), Expect(2) = 6e-08
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -2
Query: 116 IWSLKIKNKLKHFLWKCIHNILPSAVQLNKRGMDIE 9
IW+L I ++++ FLW+ HN LP+ V LN RG+ E
Sbjct: 118 IWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQCE 153
Score = 38.9 bits (89), Expect(2) = 6e-08
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -3
Query: 337 EIVNKFFGPQEAEAIMSTKIFKQVNKDHMVWSFTKDLKFSVKSAYQM 197
+IV F PQ+A AI+S + ++ D +W T ++VKSAY++
Sbjct: 52 QIVTSIFNPQDAAAILSIPLHNRLLSDTRIWKTTTTGNYTVKSAYRI 98
>gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indica Group]
gi|218196859|gb|EEC79286.1| hypothetical protein
OsI_20088 [Oryza sativa Indica Group]
Length = 216
Score = 42.0 bits (97), Expect(2) = 4e-07
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = -2
Query: 116 IWSLKIKNKLKHFLWKCIHNILPSAVQLNKRGMDIEVL 3
IW++++ NK+K F+W+ HN LP + +RGM+ + L
Sbjct: 111 IWNMEVPNKIKMFVWRLAHNSLPVRCNIRRRGMESDNL 148
Score = 37.7 bits (86), Expect(2) = 4e-07
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = -3
Query: 337 EIVNKFFGPQEAEAIMSTKIFKQVNKDHMVWSFTKDLKFSVKSAYQM---LREKK 182
++VN F P++A I++T++ + + +D W F FSVKSAY++ +REK+
Sbjct: 35 QLVNDLFWPEDAATILATQVDENL-EDWPTWHFDSKGLFSVKSAYKLAVQIREKE 88
>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
gi|241920472|gb|EER93616.1| hypothetical protein
SORBIDRAFT_01g011130 [Sorghum bicolor]
Length = 463
Score = 43.5 bits (101), Expect(2) = 7e-07
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2
Query: 122 RTIWSLKIKNKLKHFLWKCIHNILPSAVQLNKRGMDI 12
+ +W L NK+KHFLW+ +HN P L +RGM+I
Sbjct: 143 KRVWKLSCPNKIKHFLWRFLHNSHPLRDNLIRRGMEI 179
Score = 35.0 bits (79), Expect(2) = 7e-07
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = -3
Query: 334 IVNKFFGPQEAEAIMSTKIFKQVNKDHMVWSFTKDLKFSVKSAYQMLREKKVR 176
+V F ++AE I++ ++ Q + + W + K FSVKSAY++ R+ +R
Sbjct: 72 LVRDIFWEEDAEVILALPVY-QGRSNMVAWHYDKHGVFSVKSAYKVARDTYIR 123
>ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497135|gb|AES78338.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 894
Score = 40.8 bits (94), Expect(2) = 1e-06
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -2
Query: 116 IWSLKIKNKLKHFLWKCIHNILPSAVQLNKRGM 18
IWSLK+ K+K+FLW+ N LP+ ++L +G+
Sbjct: 259 IWSLKLPPKVKNFLWRACRNCLPTRIRLQSKGV 291
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -3
Query: 322 FFGPQEAEAIMSTKIFKQVNKDHMVWSFTKDLKFSVKSAYQMLREKKVRII 170
FF A I +T +F V D VW F +D +SVKSAY+ + V ++
Sbjct: 198 FFDNATARNIFNTPLFPSVAHDVPVWMFERDGAYSVKSAYKDILNHDVTVV 248
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 46.2 bits (108), Expect(2) = 2e-06
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = -2
Query: 122 RTIWSLKIKNKLKHFLWKCIHNILPSAVQLNKRGMDIE 9
+ +W +++ K+KHF+W+ HNIL V L +RGMD++
Sbjct: 1178 KKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLD 1215
Score = 30.8 bits (68), Expect(2) = 2e-06
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = -3
Query: 337 EIVNKFFGPQEAEAIMSTKIFKQVNKDHMVWSFTKDLKFSVKSAYQMLREKKVR 176
E++ + F P++ I + + +++ D + W + + FSVKSAY++ R+ +++
Sbjct: 1105 ELLTQTFWPEDVNMIRTIPVHIEMD-DMLAWHYDEKGLFSVKSAYKVQRDGELQ 1157
>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
Length = 560
Score = 46.2 bits (108), Expect(2) = 2e-06
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = -2
Query: 122 RTIWSLKIKNKLKHFLWKCIHNILPSAVQLNKRGMDIE 9
+ +W +++ K+KHF+W+ HNIL V L +RGMD++
Sbjct: 285 KKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLD 322
Score = 30.8 bits (68), Expect(2) = 2e-06
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = -3
Query: 337 EIVNKFFGPQEAEAIMSTKIFKQVNKDHMVWSFTKDLKFSVKSAYQMLREKKVR 176
E++ + F P++ I + + +++ D + W + + FSVKSAY++ R+ +++
Sbjct: 212 ELLTQTFWPEDVNMIRTIPVHIEMD-DMLAWHYDEKGLFSVKSAYKVQRDGELQ 264
>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 424
Score = 41.6 bits (96), Expect(2) = 3e-06
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = -2
Query: 155 SLDRMRKRKQ*RTIWSLKIKNKLKHFLWKCIHNILPSAVQLNKRGM 18
+L++ R +IW+LK+ K+K+F+W+ N LP+ V+L RG+
Sbjct: 203 ALNQHRVNGSWNSIWNLKLPPKVKNFMWRACRNCLPTRVKLQSRGV 248
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 331 VNKFFGPQEAEAIMSTKIFKQVNKDHMVWSFTKDLKFSVKSAY 203
+N F AE I T + V +D W F KD +S++SAY
Sbjct: 152 INYVFDTGTAEQIYKTPLLPSVQQDIATWRFEKDGNYSIRSAY 194
>ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [Sorghum bicolor]
gi|241937862|gb|EES11007.1| hypothetical protein
SORBIDRAFT_06g020406 [Sorghum bicolor]
Length = 395
Score = 39.7 bits (91), Expect(2) = 4e-06
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = -3
Query: 337 EIVNKFFGPQEAEAIMSTKIFKQVNKDHMVWSFTKDLKFSVKSAYQMLREKK 182
E+V + F P ++EAI+ + + KD W K+ F+V+SAY+ML E K
Sbjct: 2 ELVKRVFYPIDSEAILQMPLSMRKQKDCWAWHHEKNGLFTVRSAYRMLIELK 53
Score = 36.6 bits (83), Expect(2) = 4e-06
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -2
Query: 179 EDHCEAEGSL-DRMRKRKQ*RTIWSLKIKNKLKHFLWKCIHNILPSAVQLNKRGM 18
ED+ E + D +K+ + +WS+K+ +K+K F W+ N +P+A L R +
Sbjct: 57 EDYFEGRANCSDFATSQKEWKKLWSMKLPSKIKVFCWRLALNSIPTASVLKSRNL 111
>ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [Sorghum bicolor]
gi|241931893|gb|EES05038.1| hypothetical protein
SORBIDRAFT_04g017846 [Sorghum bicolor]
Length = 397
Score = 45.8 bits (107), Expect(2) = 5e-06
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -2
Query: 122 RTIWSLKIKNKLKHFLWKCIHNILPSAVQLNKRGMDI 12
++IW LK NKLKHFLW+ HN P + L +RGM I
Sbjct: 356 KSIWRLKCPNKLKHFLWRFGHNSHPLRINLVRRGMTI 392
Score = 30.0 bits (66), Expect(2) = 5e-06
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = -3
Query: 337 EIVNKFFGPQEAEAIMSTKIFKQVNKDHMVWSFTKDLKFSVKSAYQMLRE 188
++V+ F ++A I++ I Q ++ + W F K FSVKSAY++ R+
Sbjct: 284 QLVSDLFWEEDAAVILALPIH-QGRENFISWHFEKLGIFSVKSAYRVARK 332
>gb|EMS51173.1| hypothetical protein TRIUR3_15210 [Triticum urartu]
Length = 1042
Score = 43.1 bits (100), Expect(2) = 1e-05
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = -3
Query: 337 EIVNKFFGPQEAEAIMSTKIFKQVNKDHMVWSFTKDLKFSVKSAYQMLREKK 182
E++ F P +AEAI+S I + +D WS ++ +FSV+SAY+M+ KK
Sbjct: 117 ELIRTTFVPFDAEAILSIPICIRAVEDFWAWSAERNGRFSVRSAYRMIMSKK 168
Score = 31.6 bits (70), Expect(2) = 1e-05
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = -2
Query: 116 IWSLKIKNKLKHFLWKCIHNILPSAVQLNKRGM 18
+W++++ +KL+ FLW+ + +P+A L+ R M
Sbjct: 194 LWNIRVPSKLRVFLWRLARHSMPTADLLHHRHM 226