BLASTX nr result

ID: Rehmannia25_contig00032303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00032303
         (469 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|38...    73   3e-11
gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1]          72   1e-10
gb|ADP24756.1| viral protein 1 [Beet cryptic virus 2] gi|5235805...    66   4e-09
gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2]          60   4e-07
gb|EXC05962.1| hypothetical protein L484_014231 [Morus notabilis]      59   9e-07
gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1]         57   3e-06

>ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|388877113|emb|CCH50610.1|
           coat protein [Persimmon cryptic virus]
          Length = 415

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 7/158 (4%)
 Frame = +3

Query: 9   AYIIGEACSPNMSPRDGDDWTFFEEGMSHTNFDANTLPRSDDRRFYESYEVRTVEVRVSE 188
           A+I+G  CSP + PRD DDW FF   +   + +     R+  RRF+ + E RT+  R+ E
Sbjct: 268 AHILGIPCSPRLGPRDVDDWQFFPGNVMPQHINIAAYERAIPRRFFGAAEYRTISTRMWE 327

Query: 189 YPEITYPNTASTSKKKRESPYESVVIGAPEQADQSSTSGTGEPSLALATVNQLKVTIKSS 368
            P +              S     + GA   A +SS +G+G      A   Q    I   
Sbjct: 328 LPFL--------------SAVAGQMSGAKRPAPESSATGSGYMESPPAVEGQQTAAIMDP 373

Query: 369 H-------QYRISDWTYYARVVLQIDPDTRSHALWTIV 461
                   QY+I DW Y+ RV+L ++   ++ AL +I+
Sbjct: 374 GIMQTRYCQYQIIDWCYHGRVILNLNAQKQNQALRSIL 411


>gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1]
          Length = 412

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
 Frame = +3

Query: 3   TIAYIIGEACSPNMSPRDGDDWTFFEEGMSHTNFDANTLPRSDDRRFYESYEVRTVEVRV 182
           T AYIIG AC+P + P D D W ++    S   F   T PR  +RR Y +YEVRT E   
Sbjct: 255 TAAYIIGVACTPKLGPSDDDAWKYYASLNSVPTF-TPTEPRLTNRRSYGAYEVRTRETEN 313

Query: 183 SEYPEITYPN-------TASTSKKKRESPYESVVIGAPEQADQSSTSGTGEPSLALATVN 341
           + +   +  N       T +T ++K   P  +    A   A        G  S A  +  
Sbjct: 314 NYFLPDSLLNIIEDFTATGTTQRRKIRRPSAT---SASTGAAIIIRDTPGTASTATTSTT 370

Query: 342 QLKVTIKSSHQYRISDWTYYARVVLQIDPDTRSHAL 449
           + +VT     + +I DW Y++RV+L+++ ++R+ AL
Sbjct: 371 ETEVTFPPVIRTKIRDWYYHSRVILELEDNSRTAAL 406


>gb|ADP24756.1| viral protein 1 [Beet cryptic virus 2] gi|523580593|gb|AGQ49466.1|
           coat protein [Beet cryptic virus 2]
          Length = 426

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
 Frame = +3

Query: 12  YIIGEACSPNMSPRDGDDWTFFEEGMSHTNFDANTL------PRSDDRRFYESYEVRTVE 173
           YI+G  C+P + PRD D +  +       + D N +       RS +R+F+ + E RT+E
Sbjct: 255 YILGIPCTPRLGPRDEDHYQHWTHNDPPLSTDGNIILNPLAYVRSSERKFFGNAEYRTME 314

Query: 174 VRV------SEYPEITYPNTASTSKKKRESPYESVVIGAPEQADQSSTSGTGEPSL--AL 329
                    +  P +T  +T + +K+K+++  E +  G   Q D SS+S   E S   + 
Sbjct: 315 YNSYTQNFEAYMPRVT-TSTQAKNKRKKDAAPEQLSTG---QGDGSSSSKDAEMSTEESE 370

Query: 330 ATVNQLKVTIKSSHQYRISDWTYYARVVLQIDPDTRSHALWTIV 461
           A         +  HQ+R+ DW Y++RV+L  D   +  ALW  +
Sbjct: 371 APPPPKIPRPRQIHQFRLIDWVYHSRVILGADKAMQRRALWDFI 414


>gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2]
          Length = 430

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
 Frame = +3

Query: 12  YIIGEACSPNMSPRDGDDWTFFEEGMSHTNFDANTLPRSDDRRFYESYEVRTVEVRVSEY 191
           +IIGEA +P M P D DDW +F   +   N     + R   RRF  S EVRT      E 
Sbjct: 272 HIIGEALTPLMGPCDIDDWQYFPNFIRPANVPWQNMERVSARRFRGSAEVRTY---AEEK 328

Query: 192 PEIT-YPNTASTSKKKRESPYESVVIGAPEQADQSSTSGTGEPSLALATVNQLK------ 350
             +T + +T   + KKR  P  +    +   +    T       +   T++Q+       
Sbjct: 329 VNLTRFTSTGHETSKKRSKPSSTTTTSSQGGSRDMETEDEPREVVTDITLSQVTSTQQLQ 388

Query: 351 --VTIKSSHQYRISDWTYYARVVLQIDPDTRSHAL 449
             +T   + ++RI D+TYY  V+L+     R  A+
Sbjct: 389 TLMTTGEADRFRIIDYTYYCCVILRNTAQKRDGAI 423


>gb|EXC05962.1| hypothetical protein L484_014231 [Morus notabilis]
          Length = 730

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
 Frame = +3

Query: 3   TIAYIIGEACSPNMSPRDGDDWTFFEEGMSHTNFDANTLPRSDDRRFYESYEVRTVEVRV 182
           T+ YI+G AC+P + PRD DDW  F +G+       +   R  +R FY ++EVRT+++  
Sbjct: 273 TLGYILGVACTPRLGPRDVDDWQIFPDGIVPAQIRIDGYQRVTERCFYGAFEVRTIQLN- 331

Query: 183 SEYPEITYPNTASTSKKKRESPYESVVIGAPEQADQSSTSGTGE----PSLALATVN--- 341
               +IT     S  + +         +G  ++    +    GE    P+L  A      
Sbjct: 332 ----DITTAALRSIQRTREPIVRRRTALGRTKRTRPEALPALGEGTHTPALTPAPQQPAQ 387

Query: 342 -QLKVTIKSSHQYRISDWTY 398
            +      ++ + RI DWT+
Sbjct: 388 PEQPAEEPNAPKLRIIDWTF 407


>gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1]
          Length = 324

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/107 (31%), Positives = 47/107 (43%)
 Frame = +3

Query: 12  YIIGEACSPNMSPRDGDDWTFFEEGMSHTNFDANTLPRSDDRRFYESYEVRTVEVRVSEY 191
           +I+G  C+P + PRD DDW FF  G      + N   R  +RRFY S E RT+E  + E 
Sbjct: 222 HILGIPCTPRLGPRDVDDWQFFPGGALPPRVNINNYRRVTERRFYGSAEYRTLETDLHEI 281

Query: 192 PEITYPNTASTSKKKRESPYESVVIGAPEQADQSSTSGTGEPSLALA 332
                   A    K+ +        G P      + +GT +P  A A
Sbjct: 282 DTDFMAQPAPAGAKRHQPEPSGAARGRP-----LTITGTAQPPQAPA 323


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