BLASTX nr result
ID: Rehmannia25_contig00032046
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00032046
(486 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containi... 179 3e-43
ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containi... 177 1e-42
gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus pe... 152 3e-35
ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citr... 139 3e-31
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,... 139 5e-31
ref|XP_002305605.1| pentatricopeptide repeat-containing family p... 133 2e-29
gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein... 132 6e-29
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-23
ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutr... 100 2e-19
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar... 97 3e-18
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c... 97 3e-18
ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Caps... 94 1e-17
gb|EXB92320.1| hypothetical protein L484_004640 [Morus notabilis] 77 2e-12
ref|XP_004491249.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_003617310.1| Pentatricopeptide repeat-containing protein ... 77 3e-12
ref|XP_006297214.1| hypothetical protein CARUB_v10013223mg [Caps... 76 5e-12
ref|NP_195731.1| pentatricopeptide repeat-containing protein [Ar... 76 5e-12
ref|XP_006409538.1| hypothetical protein EUTSA_v10022592mg [Eutr... 75 7e-12
ref|XP_006346504.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
>ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like isoform X1 [Solanum tuberosum]
gi|565362693|ref|XP_006348080.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X2 [Solanum tuberosum]
gi|565362695|ref|XP_006348081.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X3 [Solanum tuberosum]
Length = 584
Score = 179 bits (455), Expect = 3e-43
Identities = 86/161 (53%), Positives = 118/161 (73%)
Frame = -1
Query: 486 YPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDT 307
YPPA+IV LIQ K S VL+SV+ CYC+K + L+VYQ+ ++YG+ +SV+
Sbjct: 135 YPPAQIVGFLIQSLKVGEIHIQSSVLSSVLECYCNKGLFLEALQVYQIVREYGYFVSVNC 194
Query: 306 CNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGI 127
CN LLNLL KNELRL WC + S IRNGV + TWS+IA++L KDGKFE+I IL+ G+
Sbjct: 195 CNTLLNLLLSKNELRLGWCYFGSIIRNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGV 254
Query: 126 YNPEMFDLMTDGYSKRGDFEAAFGYLNELCSKGIEPSFTTY 4
+P M++++ D YS+RG+FEAAFGYLN++ SK I+P+F T+
Sbjct: 255 CSPVMYNILIDCYSERGNFEAAFGYLNDMYSKCIDPTFNTF 295
>ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Solanum lycopersicum]
Length = 584
Score = 177 bits (449), Expect = 1e-42
Identities = 83/161 (51%), Positives = 118/161 (73%)
Frame = -1
Query: 486 YPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDT 307
YPPA+IV LIQ K S VL+SV+ CYC+K + L+VYQ+ ++YG+ +SV+
Sbjct: 135 YPPAQIVGFLIQSLKAGEIHIQSSVLSSVLECYCNKGLFLEALQVYQIVREYGYFVSVNC 194
Query: 306 CNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGI 127
CN LLNLL KN+LRL WC Y S IRNGV + TWS+IA++L KDGKFE+I IL+ G+
Sbjct: 195 CNTLLNLLLSKNDLRLGWCYYGSIIRNGVQENVVTWSLIAQMLCKDGKFEKIVAILDKGV 254
Query: 126 YNPEMFDLMTDGYSKRGDFEAAFGYLNELCSKGIEPSFTTY 4
+P +++++ D YS+RG F+AAFGYLN++ S+ I+P+F+T+
Sbjct: 255 CSPLIYNILIDCYSERGKFDAAFGYLNDMYSERIDPTFSTF 295
>gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus persica]
Length = 584
Score = 152 bits (385), Expect = 3e-35
Identities = 76/161 (47%), Positives = 107/161 (66%)
Frame = -1
Query: 486 YPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDT 307
+P +++V + KG Q S L+ V+ CY K + GLEV++ G SV
Sbjct: 121 HPVSELVQCITLACKGTDSQ--STTLSFVLGCYSRKGLFREGLEVFRKMNVLGCVPSVVA 178
Query: 306 CNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGI 127
CNALLN + +NE+RLAWC Y IRNGV D FTWS++A++L KDGKFERI R+L++ I
Sbjct: 179 CNALLNAIQRENEIRLAWCFYGLMIRNGVLPDRFTWSLVAQILCKDGKFERILRLLDLNI 238
Query: 126 YNPEMFDLMTDGYSKRGDFEAAFGYLNELCSKGIEPSFTTY 4
YN M++L+ DG SK G+F+AAF +LNE+C + ++P F+TY
Sbjct: 239 YNSMMYNLLVDGCSKSGNFDAAFSHLNEMCDRKVDPDFSTY 279
>ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citrus clementina]
gi|557551699|gb|ESR62328.1| hypothetical protein
CICLE_v10018367mg [Citrus clementina]
Length = 578
Score = 139 bits (351), Expect = 3e-31
Identities = 72/153 (47%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Frame = -1
Query: 459 LIQPRKGAAFQNISPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLC 280
+IQ +G Q S L+ V+ CY K + GLEVY+M + YGF +V CNALL+ L
Sbjct: 139 MIQSCEGRDSQ--SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 196
Query: 279 DKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGIYNPEMFDLM 100
+NE+RLA C Y + IR+GVS ++FTWS++A++L + GKFE + +L+ GIY+ M++L+
Sbjct: 197 RQNEIRLASCLYGAMIRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV 256
Query: 99 TDGYSKRGDFEAAFGYLNELCS-KGIEPSFTTY 4
D YSK+GDF AAF LNE+C+ + + P F+TY
Sbjct: 257 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 289
>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 599
Score = 139 bits (349), Expect = 5e-31
Identities = 71/161 (44%), Positives = 102/161 (63%)
Frame = -1
Query: 486 YPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDT 307
YP + ++Q +G + ++ LN V+ Y K + GLEVY+ + G SV
Sbjct: 145 YPSNLFLETMVQACRGKS--SLLCTLNFVLEFYSHKGSFLEGLEVYKKMRVIGCTPSVHA 202
Query: 306 CNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGI 127
CN LL+ L ++E+RLAWC Y + IR GV D+FTWS++A +L KDG FERI ++L+MGI
Sbjct: 203 CNVLLDALQRESEIRLAWCFYCAMIRVGVLPDKFTWSLVAHILCKDGNFERIVKLLDMGI 262
Query: 126 YNPEMFDLMTDGYSKRGDFEAAFGYLNELCSKGIEPSFTTY 4
N M++ + D YSK GDF+AAF LNE+ + +EP F+TY
Sbjct: 263 CNSVMYNAVVDYYSKNGDFKAAFCRLNEMYDRKVEPGFSTY 303
>ref|XP_002305605.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848569|gb|EEE86116.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 564
Score = 133 bits (335), Expect = 2e-29
Identities = 61/139 (43%), Positives = 95/139 (68%)
Frame = -1
Query: 420 SPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCCYA 241
S + V+ CY K + LE+++ + GF S CN++L++L +NE++LAWC Y
Sbjct: 136 SDAFSFVLECYSHKGLFMESLEMFRKMRGNGFIASGTACNSVLDVLQRENEIKLAWCFYC 195
Query: 240 SFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGIYNPEMFDLMTDGYSKRGDFEAA 61
+ I++GV D+ TWS+IA++L KDG FERI + L+MG+YN +++ + D SKRGDFEAA
Sbjct: 196 AMIKDGVLPDKLTWSLIAQILCKDGNFERIVKFLDMGVYNSVLYNGVIDCCSKRGDFEAA 255
Query: 60 FGYLNELCSKGIEPSFTTY 4
F LN++C + ++P F+TY
Sbjct: 256 FERLNQMCERKLDPGFSTY 274
>gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 578
Score = 132 bits (331), Expect = 6e-29
Identities = 68/161 (42%), Positives = 101/161 (62%)
Frame = -1
Query: 486 YPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDT 307
+P + +IQ KG FQ S L+SVI CY + GLEV++ + +GF SV
Sbjct: 131 HPAPIVADSMIQACKGKNFQ--SSALSSVIKCYSKHGLFMEGLEVFRKMRIHGFTPSVCA 188
Query: 306 CNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGI 127
CN LL+ L NE++LAW + +R G+ D+F+WS++A++L K+GK ++ +L GI
Sbjct: 189 CNELLDALQRGNEVKLAWGFLGAMLRVGIEPDQFSWSLVAQILCKNGKLGKVVGLLEKGI 248
Query: 126 YNPEMFDLMTDGYSKRGDFEAAFGYLNELCSKGIEPSFTTY 4
YN E++DL+ D YSK GDF AAF LNE+ ++ ++ SF TY
Sbjct: 249 YNSEIYDLVIDFYSKSGDFGAAFNRLNEMYNRKVDTSFCTY 289
>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Vitis vinifera]
Length = 569
Score = 117 bits (293), Expect = 2e-24
Identities = 67/157 (42%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = -1
Query: 471 IVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALL 292
+V +IQ +G + SPVL V+ CY SK + LEV++ +G+ SV +CNALL
Sbjct: 129 LVDSVIQACRGKDSE--SPVLGFVLECYSSKGLFIEALEVFRRITIHGYVPSVRSCNALL 186
Query: 291 NLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGIY-NPE 115
+ L +NE++LAWC + IRNGV D + IA +L K+GK ER+ R+L+M I N
Sbjct: 187 DSLQRENEIKLAWCVCGALIRNGVLPD---YVRIALILCKNGKLERVVRLLDMSIVCNAL 243
Query: 114 MFDLMTDGYSKRGDFEAAFGYLNELCSKGIEPSFTTY 4
++ L+ D Y +RG+F AAF YLNE+C++ +P F Y
Sbjct: 244 IYKLVIDCYCERGNFSAAFHYLNEMCNRKFDPGFCAY 280
>ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Citrus sinensis]
Length = 538
Score = 112 bits (280), Expect = 5e-23
Identities = 52/105 (49%), Positives = 78/105 (74%), Gaps = 1/105 (0%)
Frame = -1
Query: 315 VDTCNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILN 136
V CNALL+ L +NE+RLA C Y + +R+GVS ++FTWS++A++L + GKFE + +L+
Sbjct: 145 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD 204
Query: 135 MGIYNPEMFDLMTDGYSKRGDFEAAFGYLNELCS-KGIEPSFTTY 4
GIY+ M++L+ D YSK+GDF AAF LNE+C+ + + P F+TY
Sbjct: 205 SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 249
>ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutrema salsugineum]
gi|557114982|gb|ESQ55265.1| hypothetical protein
EUTSA_v10024760mg [Eutrema salsugineum]
Length = 584
Score = 100 bits (249), Expect = 2e-19
Identities = 47/142 (33%), Positives = 87/142 (61%)
Frame = -1
Query: 426 NISPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCC 247
++S L+ V+ CY K Y +GLEV+ ++ S+ N+LL+ L + + RLA C
Sbjct: 151 SLSTSLSLVLECYALKGSYQNGLEVFGSMRRLRLSPSLRAYNSLLDSLVKEKQFRLALCL 210
Query: 246 YASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGIYNPEMFDLMTDGYSKRGDFE 67
Y++ +RN V D TW ++A+VL + GKF+ + +++ G+ + +++ + + YS+ G+F+
Sbjct: 211 YSAMVRNRVVSDGLTWDLVAQVLCEQGKFKSVVKLMETGVESCKIYTNLVECYSRNGEFD 270
Query: 66 AAFGYLNELCSKGIEPSFTTYG 1
A F + E+ +K +E SF +YG
Sbjct: 271 AVFSVIQEMDAKKLELSFCSYG 292
>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659015|gb|AEE84415.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/142 (30%), Positives = 86/142 (60%)
Frame = -1
Query: 426 NISPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCC 247
++S L+ V+ Y K + +GLEV+ ++ S N+LL L +N+ R+A C
Sbjct: 151 SLSVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCL 210
Query: 246 YASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGIYNPEMFDLMTDGYSKRGDFE 67
Y++ +RNG+ DE TW +IA++L + G+ + + +++ G+ + +++ + + YS+ G+F+
Sbjct: 211 YSAMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYTNLVECYSRNGEFD 270
Query: 66 AAFGYLNELCSKGIEPSFTTYG 1
A F ++E+ K +E SF +YG
Sbjct: 271 AVFSLIHEMDDKKLELSFCSYG 292
>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
Length = 585
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/142 (30%), Positives = 86/142 (60%)
Frame = -1
Query: 426 NISPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCC 247
++S L+ V+ Y K + +GLEV+ ++ S N+LL L +N+ R+A C
Sbjct: 151 SLSVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCL 210
Query: 246 YASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGIYNPEMFDLMTDGYSKRGDFE 67
Y++ +RNG+ DE TW +IA++L + G+ + + +++ G+ + +++ + + YS+ G+F+
Sbjct: 211 YSAMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYTNLVECYSRNGEFD 270
Query: 66 AAFGYLNELCSKGIEPSFTTYG 1
A F ++E+ K +E SF +YG
Sbjct: 271 AVFSLIHEMDDKKLELSFCSYG 292
>ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Capsella rubella]
gi|482553811|gb|EOA18004.1| hypothetical protein
CARUB_v10006439mg [Capsella rubella]
Length = 585
Score = 94.4 bits (233), Expect = 1e-17
Identities = 43/141 (30%), Positives = 88/141 (62%)
Frame = -1
Query: 426 NISPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCC 247
++S L+ V+ CY K Y +GLEV+ ++ S+ N+LL+ L + + R+A C
Sbjct: 151 SLSISLSLVLECYALKGCYQNGLEVFGFMRRLRLSPSLRAYNSLLDSLIKEGQFRVALCL 210
Query: 246 YASFIRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGIYNPEMFDLMTDGYSKRGDFE 67
Y++ +RN V D FTW ++A++L + G+ + + +++ G+ + +++ + + YS+ G+F+
Sbjct: 211 YSAMVRNQVVSDGFTWDLVAQILCEQGRSKSVVKLMETGVESCKIYTNLVECYSRNGEFD 270
Query: 66 AAFGYLNELCSKGIEPSFTTY 4
A F ++E+ +K +E SF++Y
Sbjct: 271 AVFNVIHEMDNKKLELSFSSY 291
>gb|EXB92320.1| hypothetical protein L484_004640 [Morus notabilis]
Length = 539
Score = 77.4 bits (189), Expect = 2e-12
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Frame = -1
Query: 414 VLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCCYASF 235
V + ++ Y +K G EV+QM + GF +S++ CN+LL L + LAW Y
Sbjct: 248 VFDLLVRTYVQAKKLREGSEVFQMLRSKGFSVSINACNSLLGGLVKVGWVDLAWEVYWEV 307
Query: 234 IRNGVSGDEFTWSVIARVLYKDGKFERISRILN----MGIYNPEM--FDLMTDGYSKRGD 73
+R+G+ + +T +++ L KDGK +R+ L+ GI+ P++ ++ + + Y ++G
Sbjct: 308 VRSGIDLNVYTLNIMVNALCKDGKVDRVKLFLSDMEEKGIF-PDIVTYNTLINAYCRQGL 366
Query: 72 FEAAFGYLNELCSKGIEPSFTTY 4
E AF +N + KG+ P TY
Sbjct: 367 LEEAFRLVNLMSCKGLRPGLFTY 389
>ref|XP_004491249.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like isoform X1 [Cicer arietinum]
gi|502098503|ref|XP_004491250.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g01110-like isoform X2 [Cicer arietinum]
gi|502098506|ref|XP_004491251.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g01110-like isoform X3 [Cicer arietinum]
gi|502098509|ref|XP_004491252.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g01110-like isoform X4 [Cicer arietinum]
gi|502098512|ref|XP_004491253.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g01110-like isoform X5 [Cicer arietinum]
gi|502098516|ref|XP_004491254.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g01110-like isoform X6 [Cicer arietinum]
Length = 707
Score = 76.6 bits (187), Expect = 3e-12
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Frame = -1
Query: 414 VLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCCYASF 235
V + +I Y +K G E +++ ++ GF S++ CNALL + + LAW Y F
Sbjct: 147 VFDLLIRTYVQARKLREGSEAFRILRERGFCASINACNALLGGIVKVGWVDLAWKIYEDF 206
Query: 234 IRNGVSGDEFTWSVIARVLYKDGKFERI----SRILNMGIYNPEM--FDLMTDGYSKRGD 73
+R+G S + +T +++ L KDGK +R+ S + GIY P++ ++ + + Y +RG
Sbjct: 207 VRSGNSVNVYTLNIMVNALCKDGKLDRVGVFMSGMEEKGIY-PDIVTYNTLINAYCRRGL 265
Query: 72 FEAAFGYLNELCSKGIEPSFTTY 4
AF ++ + KG++P TY
Sbjct: 266 VSEAFQLMDSMAGKGLKPGIFTY 288
>ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 716
Score = 76.6 bits (187), Expect = 3e-12
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Frame = -1
Query: 414 VLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCCYASF 235
V + +I Y +K G E +Q+ ++ GF +S++ CNALL + + LAW Y F
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 234 IRNGVSGDEFTWSVIARVLYKDGKFERISRILNMGIYNPEM-----------FDLMTDGY 88
+++G + +T +++ L KDGK + N+G+Y EM ++ + + Y
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLD------NVGVYLSEMEEKGVYADLVTYNTLVNAY 269
Query: 87 SKRGDFEAAFGYLNELCSKGIEPSFTTY 4
+RG AFG ++ + KG++P TY
Sbjct: 270 CRRGLVSEAFGLVDCMAGKGLKPGLFTY 297
>ref|XP_006297214.1| hypothetical protein CARUB_v10013223mg [Capsella rubella]
gi|482565923|gb|EOA30112.1| hypothetical protein
CARUB_v10013223mg [Capsella rubella]
Length = 623
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Frame = -1
Query: 402 VIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCCYASFIRNG 223
++ C C + +E + + K+ GF +TCN +L+LL N AW YA R
Sbjct: 157 LVRCCCQLRMVDEAIECFYLMKEKGFDPKTETCNCILSLLSRLNRTESAWVFYADMYRME 216
Query: 222 VSGDEFTWSVIARVLYKDGKFERISRIL-NMGIYNPE----MFDLMTDGYSKRGDFEAAF 58
+ + +T++++ VL K+GK ++ L M + + ++ + GYS RG E A
Sbjct: 217 IKSNVYTFNIMINVLCKEGKLKKAKEFLWIMESFGSKPTVVTYNTLVKGYSSRGRIEGAR 276
Query: 57 GYLNELCSKGIEPSFTTY 4
+NE+ SKG +P TY
Sbjct: 277 LIINEMKSKGFQPDLQTY 294
>ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g01110 gi|6759434|emb|CAB69839.1| putative protein
[Arabidopsis thaliana] gi|28973740|gb|AAO64186.1|
unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein
[Arabidopsis thaliana] gi|332002917|gb|AED90300.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 729
Score = 75.9 bits (185), Expect = 5e-12
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Frame = -1
Query: 414 VLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCCYASF 235
V + +I Y +K E + + + GF +S+D CNAL+ L + LAW Y
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 234 IRNGVSGDEFTWSVIARVLYKDGKFERI----SRILNMGIYNPEM--FDLMTDGYSKRGD 73
R+GV + +T +++ L KDGK E++ S++ G+Y P++ ++ + YS +G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVY-PDIVTYNTLISAYSSKGL 285
Query: 72 FEAAFGYLNELCSKGIEPSFTTY 4
E AF +N + KG P TY
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTY 308
>ref|XP_006409538.1| hypothetical protein EUTSA_v10022592mg [Eutrema salsugineum]
gi|557110700|gb|ESQ50991.1| hypothetical protein
EUTSA_v10022592mg [Eutrema salsugineum]
Length = 633
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Frame = -1
Query: 402 VIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCCYASFIRNG 223
++ C C +E + + K+ GF +TCN +L+ L N AW YA R
Sbjct: 165 LVRCCCQLNMVEESIECFYLMKEKGFVPKTETCNCILSSLSRLNRTESAWVFYADMYRMD 224
Query: 222 VSGDEFTWSVIARVLYKDGKFERISRILNM----GIY-NPEMFDLMTDGYSKRGDFEAAF 58
+ + +T++++ VL K+GK ++ +L + G+ N ++ + GYS RG E A
Sbjct: 225 IKSNLYTYNIMINVLCKEGKLKKAKGMLGIMECFGVKPNIVTYNTLVQGYSSRGRVEGAR 284
Query: 57 GYLNELCSKGIEPSFTTY 4
+NE+ SKG +P TY
Sbjct: 285 MVINEMKSKGFKPDLQTY 302
>ref|XP_006346504.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Solanum tuberosum]
Length = 618
Score = 74.7 bits (182), Expect = 1e-11
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Frame = -1
Query: 420 SPVLNSVIVCYCSKQKYFHGLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRLAWCCYA 241
S VL+ ++ YC +K L+ + + KQ G V+TCN LL+L N LAW YA
Sbjct: 140 SIVLDLLVRAYCELKKGEDALKCFYLMKQKGILPKVETCNDLLSLFLKLNRTHLAWIVYA 199
Query: 240 SFIRNGVSGDEFTWSVIARVLYKDGKFERISRILN----MGIY-NPEMFDLMTDGYSKRG 76
R +S T++++ VL ++GK ++ + G+ N ++ + GY RG
Sbjct: 200 EMFRMKMSSTVCTFNIMINVLCREGKLKKAKEFIEHMQCSGVKPNLISYNTVIHGYCLRG 259
Query: 75 DFEAAFGYLNELCSKGIEPSFTTY 4
D E A L + +KGIEP T+
Sbjct: 260 DIEGANKILETMTAKGIEPDSYTF 283