BLASTX nr result

ID: Rehmannia25_contig00031945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00031945
         (481 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345318.1| PREDICTED: uncharacterized protein LOC102581...    80   2e-13
ref|XP_006343447.1| PREDICTED: uncharacterized protein At4g02000...    80   3e-13
ref|XP_002452061.1| hypothetical protein SORBIDRAFT_04g017843 [S...    62   1e-07
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    59   9e-07
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    59   9e-07
ref|XP_002467743.1| hypothetical protein SORBIDRAFT_01g033270 [S...    59   9e-07
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    59   9e-07
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    59   9e-07
ref|XP_004974918.1| PREDICTED: uncharacterized protein LOC101786...    57   2e-06
ref|XP_004972313.1| PREDICTED: uncharacterized protein LOC101785...    57   2e-06
ref|XP_004963470.1| PREDICTED: uncharacterized protein LOC101764...    57   2e-06
ref|XP_004954962.1| PREDICTED: uncharacterized protein LOC101756...    57   2e-06
ref|XP_006494539.1| PREDICTED: uncharacterized protein LOC102621...    57   3e-06
gb|EMJ25951.1| hypothetical protein PRUPE_ppa024202mg [Prunus pe...    56   4e-06

>ref|XP_006345318.1| PREDICTED: uncharacterized protein LOC102581842 [Solanum tuberosum]
          Length = 278

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 33/94 (35%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
 Frame = +2

Query: 5   KIGNSVK-VKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKLNFGGHVLWMDFKYKKLA 181
           KIGN++  + D+ IPE G+ +G++++    +N+ KPL +G  +  G    W++  Y+ L 
Sbjct: 145 KIGNALGGIVDIVIPENGSKEGQYIRPKARMNITKPLPRGKLIKLGSETTWVEISYENLP 204

Query: 182 NVCFYCGMLGHLDKGCENRRNDILNNSLLEGQYG 283
            VC+YCG+LGH +K C +R  D+ + ++   Q+G
Sbjct: 205 YVCYYCGLLGHNEKTCAHRAKDVQDGTVKTDQFG 238


>ref|XP_006343447.1| PREDICTED: uncharacterized protein At4g02000-like [Solanum
           tuberosum]
          Length = 177

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 32/88 (36%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +2

Query: 5   KIGNSVK-VKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKLNFGGHVLWMDFKYKKLA 181
           KIGN++  + D+ IP+ G+ +G++++L   +N+ KPL +G  +  G    W++ +YK L 
Sbjct: 87  KIGNTLGGIVDIVIPKNGSKEGQYIRLKARMNITKPLPRGKLIKLGSETTWVEIRYKNLP 146

Query: 182 NVCFYCGMLGHLDKGCENRRNDILNNSL 265
            VC+YCG+LGH +K C +R  D+ + ++
Sbjct: 147 YVCYYCGLLGHNEKTCTHRAKDVRHGTV 174


>ref|XP_002452061.1| hypothetical protein SORBIDRAFT_04g017843 [Sorghum bicolor]
           gi|241931892|gb|EES05037.1| hypothetical protein
           SORBIDRAFT_04g017843 [Sorghum bicolor]
          Length = 503

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
 Frame = +2

Query: 8   IGNSV-KVKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKLNFGG----HVLWMDFKYK 172
           IG  V KV DV   E G   G FL++ V +++ KPLM+G+ L+ G     +  W    Y+
Sbjct: 61  IGEMVGKVLDVDADENGRAVGEFLRIKVRLDIRKPLMRGVTLDIGDGDHENNKWCPLVYE 120

Query: 173 KLANVCFYCGMLGHLDKGC 229
            L + CF CG++GH+D+ C
Sbjct: 121 FLPDFCFICGLIGHVDRAC 139


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
 Frame = +2

Query: 2   MKIGNSV-KVKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKLNFGG--HVLWMDFKYK 172
           M IG  V +   + + E G+  G+FL++ + I++ KPLM+G+ L  G     LW    Y+
Sbjct: 41  MAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLVYE 100

Query: 173 KLANVCFYCGMLGHLDKGCENR 238
            L + C+ CG++GH +K CE +
Sbjct: 101 FLPDFCYICGIVGHTEKLCEKK 122


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
 Frame = +2

Query: 2   MKIGNSV-KVKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKLNFGG--HVLWMDFKYK 172
           M IG  V +   + + E G+  G+FL++ + I++ KPLM+G+ L  G     LW    Y+
Sbjct: 110 MAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLVYE 169

Query: 173 KLANVCFYCGMLGHLDKGCENR 238
            L + C+ CG++GH +K CE +
Sbjct: 170 FLPDFCYICGIVGHTEKLCEKK 191


>ref|XP_002467743.1| hypothetical protein SORBIDRAFT_01g033270 [Sorghum bicolor]
           gi|241921597|gb|EER94741.1| hypothetical protein
           SORBIDRAFT_01g033270 [Sorghum bicolor]
          Length = 542

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
 Frame = +2

Query: 2   MKIGNSV-KVKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKLNF--GGHVLWMDFKYK 172
           M +GN + +   V   + G+  G FL++ V I++ KPLM+GI L    G    W   +Y+
Sbjct: 1   MVLGNRIGRALAVDTEDDGSAVGGFLRIKVKIDIRKPLMRGILLERAEGEDDCWCPIRYE 60

Query: 173 KLANVCFYCGMLGHLDKGCEN 235
            L N C+ CG+LGH++K C++
Sbjct: 61  YLPNFCYGCGLLGHVEKECDS 81


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
 Frame = +2

Query: 2   MKIGNSV-KVKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKLNFGG--HVLWMDFKYK 172
           M IG  V +   + + E G+  G+FL++ + I++ KPLM+G+ L  G     LW    Y+
Sbjct: 113 MAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLVYE 172

Query: 173 KLANVCFYCGMLGHLDKGCENR 238
            L + C+ CG++GH +K CE +
Sbjct: 173 FLPDFCYICGIVGHTEKLCEKK 194


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1505

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
 Frame = +2

Query: 2   MKIGNSV-KVKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKLNFGG--HVLWMDFKYK 172
           M IG  V +   + + E G+  G+FL++ + I++ KPLM+G+ L  G     LW    Y+
Sbjct: 106 MAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLVYE 165

Query: 173 KLANVCFYCGMLGHLDKGCENR 238
            L + C+ CG++GH +K CE +
Sbjct: 166 FLPDFCYICGIVGHTEKLCEKK 187


>ref|XP_004974918.1| PREDICTED: uncharacterized protein LOC101786648 [Setaria italica]
          Length = 952

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = +2

Query: 23  KVKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKL--NFGGHVLWMDFKYKKLANVCFY 196
           KV  + +   G   G FL+  V I ++KP+ +GI+L  N      W   +Y++L  +CF+
Sbjct: 169 KVIQMDVDRDGKASGAFLRARVAIQIDKPVRRGIRLRVNKNEEPRWFQIQYERLPYICFH 228

Query: 197 CGMLGHLDKGCE 232
           CG +GH D  CE
Sbjct: 229 CGFMGHSDLECE 240


>ref|XP_004972313.1| PREDICTED: uncharacterized protein LOC101785285 [Setaria italica]
          Length = 946

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = +2

Query: 23  KVKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKL--NFGGHVLWMDFKYKKLANVCFY 196
           KV  + +   G   G FL+  V I ++KP+ +GI+L  N      W   +Y++L  +CF+
Sbjct: 169 KVIQMDVDRDGKASGAFLRARVAIQIDKPVRRGIRLRVNKNEEPRWFQIQYERLPYICFH 228

Query: 197 CGMLGHLDKGCE 232
           CG +GH D  CE
Sbjct: 229 CGFMGHSDLECE 240


>ref|XP_004963470.1| PREDICTED: uncharacterized protein LOC101764448 [Setaria italica]
          Length = 1051

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = +2

Query: 23  KVKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKL--NFGGHVLWMDFKYKKLANVCFY 196
           KV  + +   G   G FL+  V I ++KP+ +GI+L  N      W   +Y++L  +CF+
Sbjct: 161 KVIQMDVDRDGKASGAFLRARVAIQIDKPVRRGIRLRVNKNEEPRWFQIQYERLPYICFH 220

Query: 197 CGMLGHLDKGCE 232
           CG +GH D  CE
Sbjct: 221 CGFMGHSDLECE 232


>ref|XP_004954962.1| PREDICTED: uncharacterized protein LOC101756404 [Setaria italica]
          Length = 1209

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = +2

Query: 23  KVKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKL--NFGGHVLWMDFKYKKLANVCFY 196
           KV  + +   G   G FL+  V I ++KP+ +GI+L  N      W   +Y++L  +CF+
Sbjct: 432 KVIQMDVDRDGKASGAFLRARVAIQIDKPVRRGIRLRVNKNEEPRWFQIQYERLPYICFH 491

Query: 197 CGMLGHLDKGCE 232
           CG +GH D  CE
Sbjct: 492 CGFMGHSDLECE 503


>ref|XP_006494539.1| PREDICTED: uncharacterized protein LOC102621950 [Citrus sinensis]
          Length = 408

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/54 (42%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +2

Query: 71  FLKLLVTINMEKPLMKGIKLN-FGGHVLWMDFKYKKLANVCFYCGMLGHLDKGC 229
           ++++ V+I++ KPL + +K+   GG  +W+DFKY++L   CF CG+LGH +K C
Sbjct: 176 YMRIRVSIDVRKPLKRRMKMKKAGGDWIWVDFKYERLNIFCFICGLLGHTEKQC 229


>gb|EMJ25951.1| hypothetical protein PRUPE_ppa024202mg [Prunus persica]
          Length = 1106

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
 Frame = +2

Query: 5   KIGNSV-KVKDVFIPEGGTTQGRFLKLLVTINMEKPLMKGIKLNF-GGHVLWMDFKYKKL 178
           +IGN + +  DV   + G   GRFL++ V +++ KPL  G K++   G   W+DF+Y++L
Sbjct: 8   QIGNCMGECIDVTQRQEGECMGRFLRVCVKMDITKPLKWGTKISLPSGQTEWVDFRYERL 67

Query: 179 ANVCFYCGMLGHLDKGC 229
            N C+ CG +G +   C
Sbjct: 68  PNFCYNCGQVGRIMGDC 84


Top