BLASTX nr result
ID: Rehmannia25_contig00031834
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00031834
(512 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS72319.1| hypothetical protein M569_02430, partial [Genlise... 184 8e-45
ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa... 170 2e-40
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu... 170 2e-40
ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p... 168 6e-40
emb|CAN76605.1| hypothetical protein VITISV_012934 [Vitis vinifera] 161 7e-38
gb|EXB73671.1| hypothetical protein L484_026832 [Morus notabilis] 159 4e-37
ref|XP_004296957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p... 155 4e-36
ref|XP_006492538.1| PREDICTED: DNA repair protein RAD50-like [Ci... 155 7e-36
ref|XP_006421020.1| hypothetical protein CICLE_v10004166mg [Citr... 155 7e-36
gb|EOY05148.1| DNA repair-recombination protein (RAD50) isoform ... 154 1e-35
gb|EOY05147.1| DNA repair-recombination protein (RAD50) isoform ... 154 1e-35
gb|EOY05146.1| DNA repair-recombination protein (RAD50) isoform ... 154 1e-35
ref|XP_002300148.1| DNA repair-recombination family protein [Pop... 149 4e-34
ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ... 148 6e-34
ref|XP_006365465.1| PREDICTED: DNA repair protein RAD50-like [So... 147 1e-33
ref|XP_004239850.1| PREDICTED: DNA repair protein RAD50-like [So... 144 2e-32
ref|XP_006295998.1| hypothetical protein CARUB_v10025142mg [Caps... 143 2e-32
ref|NP_565733.1| DNA repair protein RAD50 [Arabidopsis thaliana]... 142 5e-32
dbj|BAD94628.1| putative RAD50 DNA repair protein [Arabidopsis t... 142 5e-32
ref|XP_002879357.1| hypothetical protein ARALYDRAFT_344958 [Arab... 140 1e-31
>gb|EPS72319.1| hypothetical protein M569_02430, partial [Genlisea aurea]
Length = 1314
Score = 184 bits (468), Expect = 8e-45
Identities = 92/154 (59%), Positives = 118/154 (76%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
SDEVA L D+I NEV++KA FDQY+HAN+R K+ EAQKE+K +
Sbjct: 392 SDEVALRLVDQIQLKLTDINKELLDKKKSNEVQLKAKFDQYIHANNRCKENEAQKESKEQ 451
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
MK ILKRIQEKE +RDS++VQI+ DV +++EREKN+Q EVERRANQLAA E+D+N++Q
Sbjct: 452 MKTTILKRIQEKEAERDSYDVQISSADVIVLEEREKNLQTEVERRANQLAAREYDYNVQQ 511
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQRE F L+QEI+ S+ERDAMNADSHDR++LS+
Sbjct: 512 KQREIFCLEQEIQVCSQERDAMNADSHDRILLSV 545
>ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
Length = 1088
Score = 170 bits (430), Expect = 2e-40
Identities = 88/170 (51%), Positives = 118/170 (69%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
SDEVA NLT+RI N+VE+K +D YM ANDRWK+I+AQK AKA+
Sbjct: 162 SDEVASNLTNRIKLRLVDLDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKAD 221
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K GI+KRI+EKE +RDSFE+QI+ VD++ IDEREKNMQIEVER+ NQLA EF+ IRQ
Sbjct: 222 IKRGIMKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQ 281
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSLXXXXXXXXXXXXRRIV 512
KQ + + ++Q+I+A+++E+D M DS DRV L+L R+I+
Sbjct: 282 KQSDLYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKII 331
>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
Length = 1316
Score = 170 bits (430), Expect = 2e-40
Identities = 88/170 (51%), Positives = 118/170 (69%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
SDEVA NLT+RI N+VE+K +D YM ANDRWK+I+AQK AKA+
Sbjct: 390 SDEVASNLTNRIKLRLVDLDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKAD 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K GI+KRI+EKE +RDSFE+QI+ VD++ IDEREKNMQIEVER+ NQLA EF+ IRQ
Sbjct: 450 IKRGIMKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSLXXXXXXXXXXXXRRIV 512
KQ + + ++Q+I+A+++E+D M DS DRV L+L R+I+
Sbjct: 510 KQSDLYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKII 559
>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like
[Vitis vinifera]
Length = 1316
Score = 168 bits (426), Expect = 6e-40
Identities = 85/154 (55%), Positives = 114/154 (74%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
S+E+A N T+RI E+E+K +D+YM AND WKDIEAQK+AK E
Sbjct: 390 SNEIALNFTNRIKTRLMDLEKDLQDKKKSIEMELKVAWDRYMDANDHWKDIEAQKQAKVE 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K+GILKRI+EKE +RDSFE+QI+ V ++ IDEREKN++IEVER+ NQLA EF+ NIRQ
Sbjct: 450 IKSGILKRIEEKENERDSFELQISNVSLSHIDEREKNLRIEVERKTNQLAEREFESNIRQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E ++++Q+I+AL++E+D M DS DRV LSL
Sbjct: 510 KQSELYSIEQKIKALNREKDIMAVDSEDRVKLSL 543
>emb|CAN76605.1| hypothetical protein VITISV_012934 [Vitis vinifera]
Length = 709
Score = 161 bits (408), Expect = 7e-38
Identities = 78/124 (62%), Positives = 104/124 (83%)
Frame = +3
Query: 93 EVEVKATFDQYMHANDRWKDIEAQKEAKAEMKNGILKRIQEKEVQRDSFEVQIAGVDVTI 272
E+E+K +D+YM AND WKDIEAQK+AK E+K+GILKRI+EKE +RDSFE+QI+ V ++
Sbjct: 552 EMELKVAWDRYMDANDHWKDIEAQKQAKVEIKSGILKRIEEKENERDSFELQISNVSLSH 611
Query: 273 IDEREKNMQIEVERRANQLAATEFDFNIRQKQREKFNLDQEIEALSKERDAMNADSHDRV 452
IDEREKN++IEVER+ NQLA EF+ NIRQKQ E ++++Q+I+AL++E+D M DS DRV
Sbjct: 612 IDEREKNLRIEVERKTNQLAEREFESNIRQKQSELYSIEQKIKALNREKDIMAVDSEDRV 671
Query: 453 VLSL 464
LSL
Sbjct: 672 KLSL 675
>gb|EXB73671.1| hypothetical protein L484_026832 [Morus notabilis]
Length = 691
Score = 159 bits (402), Expect = 4e-37
Identities = 81/154 (52%), Positives = 115/154 (74%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
S+EVA NLTDR+ NE+++K +D Y+ ANDRWK++EAQK+AK E
Sbjct: 390 SNEVALNLTDRVKSRVMDLEKDLQDKKKSNEIKLKTAWDHYIDANDRWKNMEAQKKAKLE 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K+G+LKRI+EKE +R+SFE++I+ VD+ ID+REKNM+IEVER+ NQLA EF+ IRQ
Sbjct: 450 IKSGLLKRIEEKENERESFELEISKVDLG-IDDREKNMEIEVERKTNQLAEREFEMIIRQ 508
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E ++++Q+I+ L++E+D M +DS DRV LSL
Sbjct: 509 KQIELYSIEQKIKDLNREKDIMASDSEDRVKLSL 542
>ref|XP_004296957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like
[Fragaria vesca subsp. vesca]
Length = 1316
Score = 155 bits (393), Expect = 4e-36
Identities = 78/153 (50%), Positives = 108/153 (70%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
++EVA NLTDRI NE EVK +D+YM +NDRWK EAQ +AKAE
Sbjct: 390 NNEVAINLTDRIKSRLRDLEKDLQDKKKLNEAEVKKAWDRYMESNDRWKLKEAQHQAKAE 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+KN +LKRI++K+ +RDSFE ++ D++ IDE+EKNM+IEVER+ NQLA +FD IRQ
Sbjct: 450 IKNDLLKRIEKKKXERDSFESSVSNCDLSRIDEKEKNMRIEVERKTNQLAVRDFDSVIRQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLS 461
KQ E F +DQ+I A+++E++ ++ D DRV+LS
Sbjct: 510 KQSEVFRIDQDITAVTREKNVLDGDRDDRVLLS 542
>ref|XP_006492538.1| PREDICTED: DNA repair protein RAD50-like [Citrus sinensis]
Length = 1316
Score = 155 bits (391), Expect = 7e-36
Identities = 79/154 (51%), Positives = 108/154 (70%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
S+E A N +RI +E+ +K +D Y+ ANDRWK+IEAQK+AK E
Sbjct: 390 SNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKME 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K GILK I+EKE +RDSFE+QI+ ++++ IDERE M+IEVER+ NQLA EF+ NIRQ
Sbjct: 450 IKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E F +DQ+I+AL++E+D + DS DRV L+L
Sbjct: 510 KQSELFAIDQKIKALNREKDVLAGDSEDRVKLAL 543
>ref|XP_006421020.1| hypothetical protein CICLE_v10004166mg [Citrus clementina]
gi|557522893|gb|ESR34260.1| hypothetical protein
CICLE_v10004166mg [Citrus clementina]
Length = 1316
Score = 155 bits (391), Expect = 7e-36
Identities = 79/154 (51%), Positives = 108/154 (70%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
S+E A N +RI +E+ +K +D Y+ ANDRWK+IEAQK+AK E
Sbjct: 390 SNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKME 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K GILK I+EKE +RDSFE+QI+ ++++ IDERE M+IEVER+ NQLA EF+ NIRQ
Sbjct: 450 IKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E F +DQ+I+AL++E+D + DS DRV L+L
Sbjct: 510 KQSELFAMDQKIKALNREKDVLAGDSEDRVKLAL 543
>gb|EOY05148.1| DNA repair-recombination protein (RAD50) isoform 3 [Theobroma
cacao]
Length = 1118
Score = 154 bits (389), Expect = 1e-35
Identities = 76/154 (49%), Positives = 109/154 (70%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
SDEVA NLT++I NE+++K+ +D YM ANDRW EAQK+AK E
Sbjct: 390 SDEVALNLTNQIEVRLMELDKDLDEKKKSNEMKLKSAWDCYMGANDRWNSTEAQKKAKLE 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K+ ILKR++EK++ RDS E+QI+ V+++ IDEREKNMQIE++R+ QL FD NIRQ
Sbjct: 450 IKSSILKRLEEKKIDRDSLELQISDVNLSRIDEREKNMQIEIDRKKKQLDERNFDANIRQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E +++DQ+I+ L++ERD + D+ DR +LS+
Sbjct: 510 KQHEVYDIDQKIKVLNRERDIIAGDAEDRTLLSI 543
>gb|EOY05147.1| DNA repair-recombination protein (RAD50) isoform 2, partial
[Theobroma cacao]
Length = 1027
Score = 154 bits (389), Expect = 1e-35
Identities = 76/154 (49%), Positives = 109/154 (70%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
SDEVA NLT++I NE+++K+ +D YM ANDRW EAQK+AK E
Sbjct: 104 SDEVALNLTNQIEVRLMELDKDLDEKKKSNEMKLKSAWDCYMGANDRWNSTEAQKKAKLE 163
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K+ ILKR++EK++ RDS E+QI+ V+++ IDEREKNMQIE++R+ QL FD NIRQ
Sbjct: 164 IKSSILKRLEEKKIDRDSLELQISDVNLSRIDEREKNMQIEIDRKKKQLDERNFDANIRQ 223
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E +++DQ+I+ L++ERD + D+ DR +LS+
Sbjct: 224 KQHEVYDIDQKIKVLNRERDIIAGDAEDRTLLSI 257
>gb|EOY05146.1| DNA repair-recombination protein (RAD50) isoform 1 [Theobroma
cacao]
Length = 1316
Score = 154 bits (389), Expect = 1e-35
Identities = 76/154 (49%), Positives = 109/154 (70%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
SDEVA NLT++I NE+++K+ +D YM ANDRW EAQK+AK E
Sbjct: 390 SDEVALNLTNQIEVRLMELDKDLDEKKKSNEMKLKSAWDCYMGANDRWNSTEAQKKAKLE 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K+ ILKR++EK++ RDS E+QI+ V+++ IDEREKNMQIE++R+ QL FD NIRQ
Sbjct: 450 IKSSILKRLEEKKIDRDSLELQISDVNLSRIDEREKNMQIEIDRKKKQLDERNFDANIRQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E +++DQ+I+ L++ERD + D+ DR +LS+
Sbjct: 510 KQHEVYDIDQKIKVLNRERDIIAGDAEDRTLLSI 543
>ref|XP_002300148.1| DNA repair-recombination family protein [Populus trichocarpa]
gi|222847406|gb|EEE84953.1| DNA repair-recombination
family protein [Populus trichocarpa]
Length = 1316
Score = 149 bits (376), Expect = 4e-34
Identities = 79/170 (46%), Positives = 109/170 (64%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
SD+VA NLT+R+ N+ EVK + Y AN+RWK+ EAQK+AK E
Sbjct: 390 SDDVALNLTNRLKSRLVDLDKDLQDKKTSNDTEVKRAENCYWDANERWKNTEAQKQAKVE 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+KN IL RI EKE + SFE QI+ V+++ IDE+EKNM+IEVER+ NQLA EF+ +IRQ
Sbjct: 450 IKNSILNRITEKEREHSSFEEQISHVNLSHIDEKEKNMRIEVERKTNQLAEREFESHIRQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSLXXXXXXXXXXXXRRIV 512
KQ E + ++Q+I+ L++E+D + DS DRV LSL R+I+
Sbjct: 510 KQSELYGIEQQIKVLNREKDILAGDSEDRVKLSLKKVELENHKKKHRKII 559
>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
putative [Ricinus communis]
Length = 1256
Score = 148 bits (374), Expect = 6e-34
Identities = 79/154 (51%), Positives = 103/154 (66%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
SD++A NLT+R+ N+ EVK D Y+ NDRWK I+AQK+AK E
Sbjct: 390 SDDIALNLTNRLKSRLTDLRKDLQDKKTSNDTEVKTAEDCYLDVNDRWKHIDAQKQAKRE 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+KNGIL RI +KE R SFE +I+ V+++ IDEREKNM+IEVER+ NQLA F+ NIRQ
Sbjct: 450 IKNGILDRITKKEHDRASFEEEISHVNLSHIDEREKNMRIEVERKTNQLAERAFESNIRQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E + ++QEI+AL E+D + S DRV LSL
Sbjct: 510 KQTELYGIEQEIKALDGEKDILAIYSEDRVKLSL 543
>ref|XP_006365465.1| PREDICTED: DNA repair protein RAD50-like [Solanum tuberosum]
Length = 1316
Score = 147 bits (372), Expect = 1e-33
Identities = 79/154 (51%), Positives = 103/154 (66%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
SD+VA NLT+RI NE E+ A + +Y AN W + EAQK+AKA+
Sbjct: 390 SDDVASNLTNRIKLRLTHFDKDLQDKKKSNEAEIAAAWHRYDIANREWSEKEAQKQAKAD 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+KNGILKRI+EKE +RD E QI+ V+V +DEREK MQIE ER++ QLA EFD NIRQ
Sbjct: 450 IKNGILKRIKEKEDERDVLESQISDVNVAHLDEREKKMQIESERKSKQLAEREFDLNIRQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E + +DQ+++ L E+D M A+S DR+ LSL
Sbjct: 510 KQTEMYTVDQKLKDLRDEKDHMAAESEDRIKLSL 543
>ref|XP_004239850.1| PREDICTED: DNA repair protein RAD50-like [Solanum lycopersicum]
Length = 1316
Score = 144 bits (362), Expect = 2e-32
Identities = 78/154 (50%), Positives = 101/154 (65%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
SD+VA NLT+RI NE E+ A + Y AN W + EAQK+AKA+
Sbjct: 390 SDDVASNLTNRIKLRLTDFDKDLQDKKKSNEAEIAAAWHLYDIANREWSEKEAQKQAKAD 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+KNGI KRI+EKE +RD E QI+ V+V +DEREK MQIE ER++ QLA EFD NIRQ
Sbjct: 450 IKNGISKRIKEKEDERDVLERQISDVNVAHLDEREKKMQIESERKSKQLAEREFDLNIRQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E + +DQ+++ L E+D M A+S DR+ LSL
Sbjct: 510 KQTEMYTVDQKLKDLRDEKDHMAAESEDRIKLSL 543
>ref|XP_006295998.1| hypothetical protein CARUB_v10025142mg [Capsella rubella]
gi|482564706|gb|EOA28896.1| hypothetical protein
CARUB_v10025142mg [Capsella rubella]
Length = 1316
Score = 143 bits (361), Expect = 2e-32
Identities = 73/154 (47%), Positives = 100/154 (64%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
S +V NLT+RI NE + +D YM ANDRWK IEAQK AK E
Sbjct: 390 SSDVVLNLTNRIKSRLGELEIDLLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDE 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K G+ KRI+EKE++RDSFE +I+ VDV DEREK +Q+E+ER+ Q + EF+ NI +
Sbjct: 450 IKMGVSKRIEEKEIERDSFEYEISTVDVKQTDEREKQVQLELERKTKQNSEREFEANIEK 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E ++++ +I+ L++ERD M D+ DRV LSL
Sbjct: 510 KQHEIYSMEHKIKTLNRERDVMAGDAEDRVKLSL 543
>ref|NP_565733.1| DNA repair protein RAD50 [Arabidopsis thaliana]
gi|57013013|sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA
repair protein RAD50; Short=AtRAD50
gi|7110148|gb|AAF36810.1|AF168748_1 DNA
repair-recombination protein [Arabidopsis thaliana]
gi|20197622|gb|AAD15407.2| putative RAD50 DNA repair
protein [Arabidopsis thaliana]
gi|22654997|gb|AAM98090.1| At2g31970/F22D22.28
[Arabidopsis thaliana] gi|29028758|gb|AAO64758.1|
At2g31970/F22D22.28 [Arabidopsis thaliana]
gi|330253520|gb|AEC08614.1| DNA repair protein RAD50
[Arabidopsis thaliana]
Length = 1316
Score = 142 bits (358), Expect = 5e-32
Identities = 75/154 (48%), Positives = 98/154 (63%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
S EV NLT+RI NE + +D YM ANDRWK IEAQK AK E
Sbjct: 390 STEVVLNLTNRIKSRLGELEMDLLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDE 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K GI KRI+EKE++RDSFE +I+ VDV DEREK +Q+E+ER+ Q + F+ I Q
Sbjct: 450 IKMGISKRIEEKEIERDSFEFEISTVDVKQTDEREKQVQVELERKTKQNSERGFESKIEQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E ++L+ +I+ L++ERD M D+ DRV LSL
Sbjct: 510 KQHEIYSLEHKIKTLNRERDVMAGDAEDRVKLSL 543
>dbj|BAD94628.1| putative RAD50 DNA repair protein [Arabidopsis thaliana]
Length = 554
Score = 142 bits (358), Expect = 5e-32
Identities = 75/154 (48%), Positives = 98/154 (63%)
Frame = +3
Query: 3 SDEVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAE 182
S EV NLT+RI NE + +D YM ANDRWK IEAQK AK E
Sbjct: 390 STEVVLNLTNRIKSRLGELEMDLLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDE 449
Query: 183 MKNGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQ 362
+K GI KRI+EKE++RDSFE +I+ VDV DEREK +Q+E+ER+ Q + F+ I Q
Sbjct: 450 IKMGISKRIEEKEIERDSFEFEISTVDVKQTDEREKQVQVELERKTKQNSERGFESKIEQ 509
Query: 363 KQREKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
KQ E ++L+ +I+ L++ERD M D+ DRV LSL
Sbjct: 510 KQHEIYSLEHKIKTLNRERDVMAGDAEDRVKLSL 543
>ref|XP_002879357.1| hypothetical protein ARALYDRAFT_344958 [Arabidopsis lyrata subsp.
lyrata] gi|297325196|gb|EFH55616.1| hypothetical protein
ARALYDRAFT_344958 [Arabidopsis lyrata subsp. lyrata]
Length = 1234
Score = 140 bits (354), Expect = 1e-31
Identities = 74/152 (48%), Positives = 97/152 (63%)
Frame = +3
Query: 9 EVAFNLTDRIXXXXXXXXXXXXXXXXXNEVEVKATFDQYMHANDRWKDIEAQKEAKAEMK 188
EV NLT+RI NE + +D YM ANDRWK IEAQK AK E+K
Sbjct: 392 EVVLNLTNRIKSRLGELEMDLLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDEIK 451
Query: 189 NGILKRIQEKEVQRDSFEVQIAGVDVTIIDEREKNMQIEVERRANQLAATEFDFNIRQKQ 368
GI KRI+EKE++RDSFE +I+ VDV DEREK +QIE+ER+ Q + F+ I QKQ
Sbjct: 452 MGISKRIEEKEIERDSFEFEISTVDVKQTDEREKQVQIELERKTKQNSELGFESKIEQKQ 511
Query: 369 REKFNLDQEIEALSKERDAMNADSHDRVVLSL 464
E ++++ +I+ L++ERD M D+ DRV LSL
Sbjct: 512 HEIYSMEHKIKTLNRERDVMAGDAEDRVKLSL 543