BLASTX nr result
ID: Rehmannia25_contig00031810
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00031810
(649 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi... 87 5e-15
ref|XP_002518061.1| pentatricopeptide repeat-containing protein,... 74 5e-11
ref|XP_006358268.1| PREDICTED: pentatricopeptide repeat-containi... 71 3e-10
ref|XP_006490098.1| PREDICTED: pentatricopeptide repeat-containi... 70 7e-10
ref|XP_006858679.1| hypothetical protein AMTR_s00066p00082400 [A... 67 6e-09
gb|EOY22910.1| Tetratricopeptide repeat-like superfamily protein... 67 6e-09
ref|XP_006858678.1| hypothetical protein AMTR_s00066p00081840 [A... 66 1e-08
ref|XP_006421694.1| hypothetical protein CICLE_v10004237mg [Citr... 65 1e-08
ref|XP_004235420.1| PREDICTED: pentatricopeptide repeat-containi... 64 5e-08
gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indi... 62 1e-07
gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japo... 62 1e-07
gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sati... 59 9e-07
ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
ref|XP_006384788.1| hypothetical protein POPTR_0004s21110g [Popu... 59 2e-06
ref|XP_002328242.1| predicted protein [Populus trichocarpa] 59 2e-06
ref|XP_006282365.1| hypothetical protein CARUB_v10028662mg [Caps... 58 2e-06
ref|XP_002866485.1| pentatricopeptide repeat-containing protein ... 58 3e-06
ref|NP_201043.1| pentatricopeptide repeat-containing protein [Ar... 56 8e-06
>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
[Vitis vinifera]
Length = 1101
Score = 86.7 bits (213), Expect = 5e-15
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
KRG P+KSSYEKLL LCA VHA +IFE+M+ H+Y PC YN WL ILC++++
Sbjct: 903 KRGLFPNKSSYEKLLKCLCASHLGVHAFKIFEEMLSHDYVPCWYNCNWLLCILCEEHRWH 962
Query: 467 KAQAMCDMLLNRRNY 423
+A + D++L +R Y
Sbjct: 963 EAHIVFDVMLKQRKY 977
>ref|XP_002518061.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542657|gb|EEF44194.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 403
Score = 73.6 bits (179), Expect = 5e-11
Identities = 31/72 (43%), Positives = 48/72 (66%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
KRGF P+K+SYE L+ CA S+ A ++FE+M+ HNY P +Y +WL IL ++ +L
Sbjct: 304 KRGFFPNKASYENLIRLFCARHLSIPAFKLFEEMLAHNYLPRQYTAEWLLHILHEEERLH 363
Query: 467 KAQAMCDMLLNR 432
++ + DM+ NR
Sbjct: 364 ESHIVLDMMHNR 375
>ref|XP_006358268.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
[Solanum tuberosum]
Length = 1067
Score = 70.9 bits (172), Expect = 3e-10
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
K+G PSK+SYE LLS LCA VHAL+I DM+ + Y PC +N + L IL ++NK
Sbjct: 906 KKGLAPSKASYESLLSSLCASNWRVHALKICHDMLANKYVPCGHNLKLLICILGEENKWH 965
Query: 467 KAQAMCDMLLNR 432
+A+ M D+LL +
Sbjct: 966 EARFMYDLLLKK 977
>ref|XP_006490098.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
isoform X1 [Citrus sinensis]
gi|568873973|ref|XP_006490099.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g62370-like isoform X2 [Citrus sinensis]
gi|568873975|ref|XP_006490100.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g62370-like isoform X3 [Citrus sinensis]
Length = 1004
Score = 69.7 bits (169), Expect = 7e-10
Identities = 30/72 (41%), Positives = 48/72 (66%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
KRGF+P K++YE LL CA+ S+ A +F++MI+H++ PC N WL +ILC++
Sbjct: 909 KRGFVPKKATYEHLLECFCANCLSIPAFNMFKEMIVHDHVPCLSNCNWLLNILCQEKHFH 968
Query: 467 KAQAMCDMLLNR 432
+AQ + D++ R
Sbjct: 969 EAQIVLDVMHKR 980
>ref|XP_006858679.1| hypothetical protein AMTR_s00066p00082400 [Amborella trichopoda]
gi|548862790|gb|ERN20146.1| hypothetical protein
AMTR_s00066p00082400 [Amborella trichopoda]
Length = 992
Score = 66.6 bits (161), Expect = 6e-09
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
K+GF+P+K SYE+LL L + + A +F++M++H PC+YNF L +LC++N+L
Sbjct: 884 KKGFVPNKISYERLLDLLSVNGAIDLAFNLFQEMLMHGCAPCKYNFNRLICLLCEENRLR 943
Query: 467 KAQAMCDMLLNR 432
+A + D +L R
Sbjct: 944 EAHFVFDAMLKR 955
>gb|EOY22910.1| Tetratricopeptide repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508775655|gb|EOY22911.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508775656|gb|EOY22912.1| Tetratricopeptide repeat-like
superfamily protein, putative isoform 1 [Theobroma cacao]
Length = 1003
Score = 66.6 bits (161), Expect = 6e-09
Identities = 30/75 (40%), Positives = 45/75 (60%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
KRG +P K++YE LL+ CA + A +IFE+M+ N P Y++ WL ILC+ KL
Sbjct: 898 KRGLIPRKATYENLLAHFCASYLCIPAFKIFEEMLASNVVPRPYSYNWLLCILCEQKKLR 957
Query: 467 KAQAMCDMLLNRRNY 423
+A + D ++ R Y
Sbjct: 958 EAYIVFDTMIQRGKY 972
>ref|XP_006858678.1| hypothetical protein AMTR_s00066p00081840 [Amborella trichopoda]
gi|548862789|gb|ERN20145.1| hypothetical protein
AMTR_s00066p00081840 [Amborella trichopoda]
Length = 992
Score = 65.9 bits (159), Expect = 1e-08
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
K+GF+PSK SY++LL L + + A +F++M++H PCRYNF L + C++N+L
Sbjct: 884 KKGFVPSKISYDRLLEHLSVNGAIDLAFNLFQEMLMHGCAPCRYNFNRLICLFCEENRLR 943
Query: 467 KAQAMCDMLLNR 432
+A + D +L R
Sbjct: 944 EAHFVFDAMLKR 955
>ref|XP_006421694.1| hypothetical protein CICLE_v10004237mg [Citrus clementina]
gi|557523567|gb|ESR34934.1| hypothetical protein
CICLE_v10004237mg [Citrus clementina]
Length = 1004
Score = 65.5 bits (158), Expect = 1e-08
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
KRGF+P K++YE LL CA+ S+ A +F++MI+H++ PC N WL +IL ++
Sbjct: 909 KRGFVPKKATYEHLLECFCANCLSIPAFNMFKEMIVHDHVPCLSNCNWLLNILFQEKHFH 968
Query: 467 KAQAMCDMLLNR 432
+AQ + D++ R
Sbjct: 969 EAQIVLDVMHKR 980
>ref|XP_004235420.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
[Solanum lycopersicum]
Length = 1081
Score = 63.5 bits (153), Expect = 5e-08
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
K+G PSK+SYE LLS LCA VHAL+I DM+ + Y PC +N + L IL ++NK
Sbjct: 906 KKGLAPSKASYESLLSSLCASNWRVHALKICHDMLANKYVPCGHNLKLLICILGEENKWH 965
Query: 467 KAQ 459
+A+
Sbjct: 966 EAR 968
>gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indica Group]
Length = 481
Score = 62.0 bits (149), Expect = 1e-07
Identities = 30/75 (40%), Positives = 45/75 (60%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
KRGF+PSK+SY+KL+ L A + L++FEDM+ Y P N+ L +L KD +
Sbjct: 372 KRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWS 431
Query: 467 KAQAMCDMLLNRRNY 423
+A + M+L +R Y
Sbjct: 432 EADRIFTMMLKKRKY 446
>gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
Length = 906
Score = 62.0 bits (149), Expect = 1e-07
Identities = 30/75 (40%), Positives = 45/75 (60%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
KRGF+PSK+SY+KL+ L A + L++FEDM+ Y P N+ L +L KD +
Sbjct: 797 KRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWS 856
Query: 467 KAQAMCDMLLNRRNY 423
+A + M+L +R Y
Sbjct: 857 EADRIFTMMLKKRKY 871
>gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa] gi|31429883|gb|AAP51872.1|
hypothetical protein LOC_Os10g02650 [Oryza sativa
Japonica Group]
Length = 949
Score = 59.3 bits (142), Expect = 9e-07
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
KRGF+PSK+SY+KL+ L A + L++FEDM+ Y P N+ L +L KD +
Sbjct: 820 KRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWS 879
Query: 467 KAQAMCDMLLNRR 429
+A + M+L +R
Sbjct: 880 EADRIFTMMLKKR 892
>ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
[Brachypodium distachyon]
Length = 926
Score = 59.3 bits (142), Expect = 9e-07
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
KRGF+PSK++Y+K++ L A S+ AL IF+DM H Y P N+ L +L KDN+
Sbjct: 817 KRGFVPSKAAYDKIMEQLLAENSTDLALNIFDDMFCHGYIPRYSNYSSLLLVLAKDNQWR 876
Query: 467 KAQAMCDMLLNR 432
+ + M+L +
Sbjct: 877 EVDRVFMMMLEK 888
>ref|XP_006384788.1| hypothetical protein POPTR_0004s21110g [Populus trichocarpa]
gi|550341556|gb|ERP62585.1| hypothetical protein
POPTR_0004s21110g [Populus trichocarpa]
Length = 1025
Score = 58.5 bits (140), Expect = 2e-06
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
KRGF P++ +YEK + CA S+ A RIFE+M+ N P Y L ILC++ KL
Sbjct: 873 KRGFFPNRLAYEKSHHYFCAGHMSIPAFRIFEEMVACNLVPGLYRRNLLLYILCEEKKLH 932
Query: 467 KAQAMCDMLLNR 432
+A D++ R
Sbjct: 933 EAYRASDVMFER 944
>ref|XP_002328242.1| predicted protein [Populus trichocarpa]
Length = 893
Score = 58.5 bits (140), Expect = 2e-06
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
KRGF P++ +YEK + CA S+ A RIFE+M+ N P Y L ILC++ KL
Sbjct: 784 KRGFFPNRLAYEKSHHYFCAGHMSIPAFRIFEEMVACNLVPGLYRRNLLLYILCEEKKLH 843
Query: 467 KAQAMCDMLLNR 432
+A D++ R
Sbjct: 844 EAYRASDVMFER 855
>ref|XP_006282365.1| hypothetical protein CARUB_v10028662mg [Capsella rubella]
gi|482551069|gb|EOA15263.1| hypothetical protein
CARUB_v10028662mg [Capsella rubella]
Length = 983
Score = 58.2 bits (139), Expect = 2e-06
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
K+G P+K SYEKLL LC R ++ A+++ +DM Y+P N WL ILC++ KL
Sbjct: 890 KQGIHPNKYSYEKLLQCLCYSRLTMEAVKVVKDMAALYYWPRSINHTWLIYILCEEKKLR 949
Query: 467 KAQAM 453
+A+A+
Sbjct: 950 EARAL 954
>ref|XP_002866485.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312320|gb|EFH42744.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 983
Score = 57.8 bits (138), Expect = 3e-06
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
K+G P+K SYEKLL LC R ++ A ++ +DM + +P N WL ILC++ KL
Sbjct: 890 KKGIYPNKDSYEKLLQCLCYSRLTMEAFKVVKDMAALDIWPRSINHTWLIYILCEEKKLR 949
Query: 467 KAQAM 453
+A+A+
Sbjct: 950 EARAL 954
>ref|NP_201043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180621|sp|Q9LVA2.1|PP443_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g62370 gi|8809650|dbj|BAA97201.1| unnamed protein
product [Arabidopsis thaliana]
gi|332010218|gb|AED97601.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 982
Score = 56.2 bits (134), Expect = 8e-06
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = -3
Query: 647 KRGFLPSKSSYEKLLSFLCAHRSSVHALRIFEDMILHNYFPCRYNFQWLNSILCKDNKLD 468
K G P+K SYEKLL LC R ++ A+++ +DM + +P N WL ILC++ KL
Sbjct: 889 KSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLR 948
Query: 467 KAQAM 453
+A+A+
Sbjct: 949 EARAL 953