BLASTX nr result
ID: Rehmannia25_contig00031777
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00031777
(367 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 136 3e-30
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 133 2e-29
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A... 126 3e-27
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas... 125 4e-27
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A... 117 1e-24
gb|EMJ15225.1| hypothetical protein PRUPE_ppa016668mg, partial [... 103 2e-20
emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera] 100 3e-19
emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera] 98 1e-18
emb|CAN79905.1| hypothetical protein VITISV_022123 [Vitis vinifera] 98 1e-18
emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera] 98 1e-18
emb|CAN69899.1| hypothetical protein VITISV_029782 [Vitis vinifera] 98 1e-18
emb|CAN78865.1| hypothetical protein VITISV_013346 [Vitis vinifera] 97 2e-18
emb|CAN84170.1| hypothetical protein VITISV_028525 [Vitis vinifera] 97 2e-18
emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera] 97 2e-18
emb|CAN76931.1| hypothetical protein VITISV_023947 [Vitis vinifera] 97 2e-18
emb|CAN67355.1| hypothetical protein VITISV_002170 [Vitis vinifera] 97 2e-18
emb|CAN72890.1| hypothetical protein VITISV_022310 [Vitis vinifera] 97 2e-18
emb|CAN67208.1| hypothetical protein VITISV_002056 [Vitis vinifera] 97 3e-18
ref|XP_002447980.1| hypothetical protein SORBIDRAFT_06g019215 [S... 96 4e-18
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera] 96 4e-18
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
H; Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 136 bits (342), Expect = 3e-30
Identities = 66/118 (55%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
Frame = -1
Query: 355 NVLHGRS-DANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLL 179
N+L R N+ LK+DI KAFDTL W+FLL VL+RFGF E F+HW+ VIL+S+++SVL+
Sbjct: 572 NLLEKRQYGGNVALKVDIAKAFDTLDWNFLLAVLQRFGFDEKFVHWILVILQSARLSVLV 631
Query: 178 NGTPVGYFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAVAQNRLQPFIAPRRIIFPS 5
NG VG+F+C GVRQGDPLSPLLFC+ EEVLS+ + +A +L P R + FP+
Sbjct: 632 NGKAVGFFTCSHGVRQGDPLSPLLFCLVEEVLSRALSMAATDGQLIPMSYCRGVSFPT 689
>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 528
Score = 133 bits (335), Expect = 2e-29
Identities = 63/118 (53%), Positives = 85/118 (72%), Gaps = 1/118 (0%)
Frame = -1
Query: 355 NVLHGRS-DANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLL 179
N+L +S N+ K+DI KAFDTL W FLL VL++FGFSE F +W+D IL+S+K+S+ +
Sbjct: 246 NMLDQKSFGGNLAFKVDISKAFDTLNWKFLLKVLKQFGFSETFCNWIDAILQSAKLSICI 305
Query: 178 NGTPVGYFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAVAQNRLQPFIAPRRIIFPS 5
NG+ GYFSC +GVRQGDPLSPLLFC+ E+VLS+ + V Q +L+ R + PS
Sbjct: 306 NGSQQGYFSCSRGVRQGDPLSPLLFCLAEDVLSRSLTKLVEQGKLKQMRGTRNCLVPS 363
>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 872
Score = 126 bits (316), Expect = 3e-27
Identities = 64/119 (53%), Positives = 86/119 (72%), Gaps = 1/119 (0%)
Frame = -1
Query: 358 FNVLHGRS-DANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVL 182
FN+L + N+ +K DI KAFDTL WDFLLHVL+ FGF E F+ V V+L S+++S+L
Sbjct: 67 FNLLDSKCYGGNVAIKTDITKAFDTLSWDFLLHVLQAFGFHESFVQ-VRVLLLSARLSLL 125
Query: 181 LNGTPVGYFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAVAQNRLQPFIAPRRIIFPS 5
+NG GYFSC +GVRQGDPLSPLLFC+ EEVLS+ I + V+ +++ +PR + PS
Sbjct: 126 INGRTYGYFSCGQGVRQGDPLSPLLFCLAEEVLSRGISMLVSSGQVKRIHSPRGTLSPS 184
>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 642
Score = 125 bits (315), Expect = 4e-27
Identities = 62/117 (52%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Frame = -1
Query: 355 NVLHGRS-DANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLL 179
NVL +S N+ LKID+ KAFDTL WDFLL VL+ FGF+E+F +W+ IL SSK+ + +
Sbjct: 307 NVLDNKSFGGNLALKIDVTKAFDTLNWDFLLLVLKTFGFNELFCNWIKTILHSSKMFISM 366
Query: 178 NGTPVGYFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAVAQNRLQPFIAPRRIIFP 8
NG G+F+C +GVRQGDPLSPLLFCI EEVLS+ I + + + A R P
Sbjct: 367 NGAQHGFFNCNRGVRQGDPLSPLLFCIVEEVLSRSISILADKGLIDLIAASRNNCLP 423
>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 751
Score = 117 bits (294), Expect = 1e-24
Identities = 56/113 (49%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Frame = -1
Query: 358 FNVLHGRS-DANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVL 182
FN+L + D N+ +K+DI KAFDTL W FL+ VL RFGF F + ++L S+ +S+L
Sbjct: 6 FNLLDRKIVDGNVGIKVDIAKAFDTLNWQFLIEVLHRFGFGSRFTDLMLILLNSAHLSIL 65
Query: 181 LNGTPVGYFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAVAQNRLQPFIAPR 23
+NG+P G+FSC KGVRQGDPLSP+LFCI EE LS+ + + +++ PR
Sbjct: 66 INGSPHGFFSCTKGVRQGDPLSPILFCIAEEALSRGLTALFSSKKVRSISLPR 118
>gb|EMJ15225.1| hypothetical protein PRUPE_ppa016668mg, partial [Prunus persica]
Length = 152
Score = 103 bits (257), Expect = 2e-20
Identities = 53/107 (49%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Frame = -1
Query: 355 NVLHGRS-DANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLL 179
N+L R+ N+ +K D+ KAFDTL W FL +VL FGF EVFI WV IL + +L
Sbjct: 47 NLLDNRNFGGNVSIKFDVAKAFDTLNWTFLTNVLTAFGFHEVFIKWVGAILSPACFLILF 106
Query: 178 NGTPVGYFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAVAQNRLQP 38
NG+PVG+F C +GVRQGD LSP+LF + EE F++V+ N +P
Sbjct: 107 NGSPVGFFGCSQGVRQGDLLSPILFYLAEE---GFMQVSFGPNLYKP 150
>emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera]
Length = 3028
Score = 100 bits (248), Expect = 3e-19
Identities = 45/94 (47%), Positives = 66/94 (70%)
Frame = -1
Query: 340 RSDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVG 161
R+++ ++ K+D+ KA+D + WDFL+ VL+ GF E +I W+ + ++ SVL+NGTP G
Sbjct: 2430 RNESGVLCKLDLEKAYDHINWDFLIFVLQSMGFGEKWIGWISWCISTATFSVLINGTPEG 2489
Query: 160 YFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAV 59
YF+ +G+RQGDPLSP LF I E LS+ I AV
Sbjct: 2490 YFNSSRGLRQGDPLSPYLFVIGMEALSRLINRAV 2523
>emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera]
Length = 1701
Score = 98.2 bits (243), Expect = 1e-18
Identities = 45/94 (47%), Positives = 65/94 (69%)
Frame = -1
Query: 340 RSDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVG 161
R+++ ++ K+D+ KA+D + W+FLL VL+ GF E +I W+ + + SVL+NGTP G
Sbjct: 1058 RNESGVLCKLDLEKAYDHINWNFLLFVLQNMGFGEKWIGWISWCISIATFSVLINGTPEG 1117
Query: 160 YFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAV 59
YF+ +G+RQGDPLSP LF I E LS+ I AV
Sbjct: 1118 YFNSSRGLRQGDPLSPYLFVIGMEALSRLINRAV 1151
>emb|CAN79905.1| hypothetical protein VITISV_022123 [Vitis vinifera]
Length = 1420
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/97 (45%), Positives = 66/97 (68%)
Frame = -1
Query: 340 RSDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVG 161
R + ++ K+DI KA+D++ W+FL+ VL++ GF ++ W+ ++K SVL+NG P G
Sbjct: 1256 RKEKGLVCKLDIEKAYDSISWNFLMKVLKKMGFGSRWMEWMWWCFSTAKFSVLINGVPEG 1315
Query: 160 YFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAVAQN 50
+FS KG+RQGDP+SP LF + +EVLS I AV N
Sbjct: 1316 FFSSSKGLRQGDPISPYLFILGKEVLSALIRRAVQGN 1352
>emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]
Length = 971
Score = 97.8 bits (242), Expect = 1e-18
Identities = 40/93 (43%), Positives = 67/93 (72%)
Frame = -1
Query: 337 SDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVGY 158
+++ ++ K+DI KA+D + W+F+L ++++ GF E +I W+ + ++ SV++NGTP G+
Sbjct: 327 NESGILCKLDIEKAYDKVDWNFILTIMKKMGFGEKWIRWIQWCISTASFSVMINGTPTGF 386
Query: 157 FSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAV 59
F +G+RQGDPLSP LF I +EV + FI+ AV
Sbjct: 387 FQSSRGLRQGDPLSPYLFVIAKEVFTVFIKRAV 419
>emb|CAN69899.1| hypothetical protein VITISV_029782 [Vitis vinifera]
Length = 760
Score = 97.8 bits (242), Expect = 1e-18
Identities = 41/93 (44%), Positives = 67/93 (72%)
Frame = -1
Query: 337 SDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVGY 158
++++++ K+DI KA+D + W+F+L ++++ GF E +I W+ + ++ SV++NGTP G+
Sbjct: 116 NESDILCKLDIEKAYDKVDWNFILTIMKKMGFGEKWIRWIQWCIFTASFSVMINGTPTGF 175
Query: 157 FSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAV 59
F +G+RQGDPLSP LF I EV S FI+ AV
Sbjct: 176 FQSSRGLRQGDPLSPYLFVIAMEVFSAFIKRAV 208
>emb|CAN78865.1| hypothetical protein VITISV_013346 [Vitis vinifera]
Length = 2935
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/95 (46%), Positives = 64/95 (67%)
Frame = -1
Query: 346 HGRSDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTP 167
H R + +I K+DI KA+D++ W FL+ VLR+ GF ++ W+ + ++K S+L+NG P
Sbjct: 2527 HKRKEKGLICKLDIEKAYDSINWKFLMKVLRKMGFGSRWMDWMWWCISTAKFSILINGVP 2586
Query: 166 VGYFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVA 62
VG+FS KG+RQGDPLSP LF + E LS + A
Sbjct: 2587 VGFFSNSKGLRQGDPLSPYLFVLGMEXLSTLLRXA 2621
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = -1
Query: 334 DANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVGYF 155
+ ++ KID K +D +KWDFL HVL + GFS + W+ L S ++L+NG+ G+
Sbjct: 1134 EEGVVFKIDFEKVYDHVKWDFLDHVLEKKGFSPRWRKWMSGCLSSVSYAILVNGSAKGWV 1193
Query: 154 SCFKGVRQ 131
+G+RQ
Sbjct: 1194 KASRGLRQ 1201
>emb|CAN84170.1| hypothetical protein VITISV_028525 [Vitis vinifera]
Length = 705
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/97 (45%), Positives = 64/97 (65%)
Frame = -1
Query: 340 RSDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVG 161
R + ++ K+DI KA+D++ W FL+ VL++ GF ++ W+ ++K SVL+NG P G
Sbjct: 323 RKEKGLVCKLDIEKAYDSISWSFLMKVLKKMGFGSCWMDWMWWCFSTAKFSVLINGVPAG 382
Query: 160 YFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAVAQN 50
+FS KG+RQGDP+SP LF + EVLS I AV N
Sbjct: 383 FFSSSKGLRQGDPISPYLFILGMEVLSXLIRRAVQGN 419
>emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]
Length = 1971
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/94 (46%), Positives = 65/94 (69%)
Frame = -1
Query: 340 RSDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVG 161
R++ ++ K+D+ KA+D + W+FLL VL+ GF E +I W+ + ++ SVL+NGTP G
Sbjct: 876 RNERGVLCKLDLEKAYDHINWNFLLFVLQSMGFGEKWIGWISWCISTATFSVLINGTPEG 935
Query: 160 YFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAV 59
YF+ +G+RQGDPLSP LF + E LS+ I AV
Sbjct: 936 YFNSSRGLRQGDPLSPYLFVLGMEALSRLIHRAV 969
>emb|CAN76931.1| hypothetical protein VITISV_023947 [Vitis vinifera]
Length = 916
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/100 (45%), Positives = 66/100 (66%)
Frame = -1
Query: 349 LHGRSDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGT 170
L R + ++ K+DI KA+D++ W+FL+ VL++ GF ++ W+ L ++K SVL+NG
Sbjct: 404 LQKRKEKRLVCKLDIEKAYDSINWNFLMKVLKKMGFGSRWMEWMWWCLSTAKFSVLINGV 463
Query: 169 PVGYFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAVAQN 50
P G+FS KG+RQGDP+SP LF + EVLS I V N
Sbjct: 464 PKGFFSSSKGLRQGDPISPYLFVLGMEVLSALIRRVVEGN 503
>emb|CAN67355.1| hypothetical protein VITISV_002170 [Vitis vinifera]
Length = 1385
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/94 (46%), Positives = 65/94 (69%)
Frame = -1
Query: 340 RSDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVG 161
R + +I K+DI+KA+D++ W FL+ V+++ GF + W+ + ++K SVL+NG P G
Sbjct: 782 RGETGLICKLDIKKAYDSVNWQFLMRVMQKMGFGVKWREWIWSCISTAKFSVLINGEPAG 841
Query: 160 YFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAV 59
+FS +G+RQGDPLSP LF + EVLS FI AV
Sbjct: 842 FFSSSRGLRQGDPLSPYLFIMGMEVLSAFIRRAV 875
>emb|CAN72890.1| hypothetical protein VITISV_022310 [Vitis vinifera]
Length = 1356
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/99 (46%), Positives = 64/99 (64%)
Frame = -1
Query: 340 RSDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVG 161
R + +I K+DI KA+D++ W FLL VL++ GF ++ W+ L S+K SV++NG P G
Sbjct: 590 RKEKGLICKLDIEKAYDSINWKFLLKVLQKMGFGSKWVRWMWSCLSSAKFSVMVNGVPAG 649
Query: 160 YFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAVAQNRL 44
+F KG+RQGDPLSP LF + EVL I AV + L
Sbjct: 650 FFPSSKGLRQGDPLSPYLFVMGMEVLDVLIRKAVEEGFL 688
>emb|CAN67208.1| hypothetical protein VITISV_002056 [Vitis vinifera]
Length = 646
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/94 (47%), Positives = 65/94 (69%)
Frame = -1
Query: 340 RSDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVG 161
R+++ ++ K+DI KA+D L W+FLL VL+R GF E + W+ + ++ SVL+NGTP G
Sbjct: 325 RNESGVLCKLDIEKAYDHLNWNFLLLVLQRMGFGEKWTGWISWCISTATFSVLINGTPAG 384
Query: 160 YFSCFKGVRQGDPLSPLLFCITEEVLSKFIEVAV 59
+F+ +G+RQGDPLSP LF I E S+ I AV
Sbjct: 385 FFNSSRGLRQGDPLSPYLFVIGMEAFSRLILRAV 418
>ref|XP_002447980.1| hypothetical protein SORBIDRAFT_06g019215 [Sorghum bicolor]
gi|241939163|gb|EES12308.1| hypothetical protein
SORBIDRAFT_06g019215 [Sorghum bicolor]
Length = 746
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/99 (47%), Positives = 64/99 (64%)
Frame = -1
Query: 322 ILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTPVGYFSCFK 143
+LK+DI KAFDT+ W FLL+ L+ FGF E + WV IL ++ ++LNG P S +
Sbjct: 528 LLKLDISKAFDTVAWPFLLNTLQTFGFGERWRRWVATILSTATSRIILNGRPGNAISHRR 587
Query: 142 GVRQGDPLSPLLFCITEEVLSKFIEVAVAQNRLQPFIAP 26
GVRQGD LSP+LF I EV ++ + A A+N L+P P
Sbjct: 588 GVRQGDSLSPMLFIIAMEVFARLVATAAAENLLRPIRVP 626
>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
Length = 2416
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/89 (48%), Positives = 62/89 (69%)
Frame = -1
Query: 346 HGRSDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEVFIHWVDVILRSSKISVLLNGTP 167
H R + +I K+DI KA+D+L W+FL+ VLR+ GF ++ W+ + ++K S+L+NG P
Sbjct: 1247 HKRKEKGLICKLDIEKAYDSLNWEFLMKVLRKMGFGSRWMDWMWWCISTAKFSILINGVP 1306
Query: 166 VGYFSCFKGVRQGDPLSPLLFCITEEVLS 80
G+F KG+RQGDPLSP LF + EVLS
Sbjct: 1307 AGFFPNSKGLRQGDPLSPYLFILGMEVLS 1335