BLASTX nr result
ID: Rehmannia25_contig00031502
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00031502
(458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002306065.1| predicted protein [Populus trichocarpa] 55 4e-14
ref|XP_002303290.1| predicted protein [Populus trichocarpa] gi|2... 52 3e-13
ref|XP_002319880.1| predicted protein [Populus trichocarpa] 52 3e-09
ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628... 46 2e-07
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 42 6e-07
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 42 6e-07
emb|CAN73335.1| hypothetical protein VITISV_035137 [Vitis vinifera] 48 8e-07
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854... 42 8e-07
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 43 1e-06
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 40 2e-06
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252... 40 3e-06
>ref|XP_002306065.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 55.1 bits (131), Expect(2) = 4e-14
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = -1
Query: 179 DFGATKHVTRDKASFVDYHRVPACSHYIDMGNGAREEVVGVGSYQLKLSTGRELLFSDV 3
D AT H+ RD+ +FV++ R+P S YI +GN A V+G+G+ +L L GR L DV
Sbjct: 142 DSRATDHIARDRTTFVEFRRIPKGSKYIYIGNNASTVVLGIGTCKLDLRGGRTLYLHDV 200
Score = 48.1 bits (113), Expect(2) = 4e-14
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -2
Query: 238 ICFNCGKPGHFARDCTEPK 182
ICFNCGKPGHFAR+CTEPK
Sbjct: 95 ICFNCGKPGHFARNCTEPK 113
>ref|XP_002303290.1| predicted protein [Populus trichocarpa]
gi|224099121|ref|XP_002334508.1| predicted protein
[Populus trichocarpa]
Length = 173
Score = 51.6 bits (122), Expect(2) = 3e-13
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Frame = -2
Query: 457 ASHFRLEADRREVE*AQTAAFV-------AHAGQHKPIKGKQWNKHTGARQSSCNNQNLG 299
A H +L+ DR VE AF+ A+ ++K KG ++ K SS +
Sbjct: 18 ARHVKLKEDRLHVEKPVNEAFISETKIHGAYDSKYKKGKGPKYGKRGIKANSSGYKRKHE 77
Query: 298 PHGEKSTKRQCXXXXXXXKNICFNCGKPGHFARDCTEP 185
G K K CFNCGKPGHFARD TEP
Sbjct: 78 KRGGKKGKNMN----------CFNCGKPGHFARDYTEP 105
Score = 48.9 bits (115), Expect(2) = 3e-13
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = -1
Query: 179 DFGATKHVTRDKASFVDYHRVPACSHYIDMGNGAREEVVGVGSYQLKLSTGRELLFSDV 3
D AT H+ RD+ +FV+ HR+P S YI MGN A ++ +G+ +L L L DV
Sbjct: 109 DLKATDHIARDRTTFVESHRIPKGSRYIYMGNNAFAVMLQIGTCKLDLRGSHILYLHDV 167
>ref|XP_002319880.1| predicted protein [Populus trichocarpa]
Length = 124
Score = 52.4 bits (124), Expect(2) = 3e-09
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = -1
Query: 173 GATKHVTRDKASFVDYHRVPACSHYIDMGNGAREEVVGVGSYQLKLSTGRELLFSDV 3
GA H+T D+ +FV+YH++ S YI MGN A V+G+G+ +L L G L DV
Sbjct: 61 GAINHITMDQTTFVEYHQILKGSKYIYMGNNAFTVVLGIGTCKLDLQGGHTLYLHDV 117
Score = 34.7 bits (78), Expect(2) = 3e-09
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = -2
Query: 391 AHAGQHKPIKGK--QWNKHTGARQSSCNNQNLGPHGEKSTKRQCXXXXXXXKNICFNCGK 218
A+ ++K KGK +++K SS + G H K K CFNCGK
Sbjct: 4 AYGSKYKKDKGKGSKYSKKGIEASSSGHKYKCGKHSSKKDKNMN----------CFNCGK 53
Query: 217 PGHFA 203
GHFA
Sbjct: 54 HGHFA 58
>ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628178 [Citrus sinensis]
Length = 2248
Score = 46.2 bits (108), Expect(2) = 2e-07
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = -1
Query: 179 DFGATKHVTRDKASFVDYHRVPACSHYIDMGNGAREEVVGVGSYQLKLSTGRELLFSDV 3
D GAT+HV DK F + V + + MGN A E+ G G+ LK+++G+EL +DV
Sbjct: 1263 DTGATRHVCSDKGLFTSFETV-SNGEKLFMGNSAMSEIEGQGNVILKMTSGKELTLNDV 1320
Score = 34.3 bits (77), Expect(2) = 2e-07
Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = -2
Query: 445 RLEADRREVE*AQTAAFV-AHAGQHKPIKGKQWNKHTGARQSSCNNQNLGPHGEKSTKRQ 269
R+E D R E + A+ +H+P K N+ LGP G S K+
Sbjct: 1155 RIEEDNRNAERIGAISMAKANVVEHRPKNKK--------------NKKLGPKGGISKKQT 1200
Query: 268 CXXXXXXXKNICFNCGKPGHFARDCTEPKKTSEQ 167
FNC K GH DC PKK E+
Sbjct: 1201 NFQGKY------FNCDKMGHKVSDCRLPKKKREE 1228
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 42.0 bits (97), Expect(2) = 6e-07
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = -1
Query: 179 DFGATKHVTRDKASFVDYHRVPACSHYIDMGNGAREEVVGVGSYQLKLSTGRELLFSDV 3
D GAT+HV DK F + + + MGN A E+ G G LK+++G+EL ++V
Sbjct: 339 DTGATRHVCSDKKMFSTFEPIEN-GEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNV 396
Score = 37.0 bits (84), Expect(2) = 6e-07
Identities = 36/96 (37%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Frame = -2
Query: 445 RLEADRR--EVE*AQT-----AAFVAHAGQHKPIKGKQWNKHTGARQSSCNNQNLGPHGE 287
R+E D R E + A T A FV H GQ K NK G++ LGP G
Sbjct: 220 RIEEDNRRSEKKGAHTLNEAKANFVEH-GQSSKAKTNN-NKGKGSK--------LGPKGG 269
Query: 286 KSTKRQCXXXXXXXKNICFNCGKPGHFARDCTEPKK 179
S K + CFNCGK GH + DC PKK
Sbjct: 270 ISKKPKFQGK-------CFNCGKQGHKSVDCRLPKK 298
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 42.0 bits (97), Expect(2) = 6e-07
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = -1
Query: 179 DFGATKHVTRDKASFVDYHRVPACSHYIDMGNGAREEVVGVGSYQLKLSTGRELLFSDV 3
D GAT+HV DK F + + + MGN A E+ G G LK+++G+EL ++V
Sbjct: 260 DTGATRHVCSDKKMFSTFEPIEN-GEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNV 317
Score = 37.0 bits (84), Expect(2) = 6e-07
Identities = 36/96 (37%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Frame = -2
Query: 445 RLEADRR--EVE*AQT-----AAFVAHAGQHKPIKGKQWNKHTGARQSSCNNQNLGPHGE 287
R+E D R E + A T A FV H GQ K NK G++ LGP G
Sbjct: 141 RIEEDNRRSEKKGAHTLNEAKANFVEH-GQSSKAKTNN-NKGKGSK--------LGPKGG 190
Query: 286 KSTKRQCXXXXXXXKNICFNCGKPGHFARDCTEPKK 179
S K + CFNCGK GH + DC PKK
Sbjct: 191 ISKKPKFQGK-------CFNCGKQGHKSVDCRLPKK 219
>emb|CAN73335.1| hypothetical protein VITISV_035137 [Vitis vinifera]
Length = 526
Score = 47.8 bits (112), Expect(2) = 8e-07
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = -1
Query: 179 DFGATKHVTRDKASFVDYHRVPACSHYIDMGNGAREEVVGVGSYQLKLSTGRELLFSDV 3
D A H+ RD+ +++++ R+ + + +I +GN ++ EV G+ + +L+LS GR L DV
Sbjct: 132 DSXAXDHIARDQGAYIEFRRISSGTRWIYVGNNSKVEVKGIRTCKLELSKGRTLFLHDV 190
Score = 30.8 bits (68), Expect(2) = 8e-07
Identities = 24/91 (26%), Positives = 36/91 (39%)
Frame = -2
Query: 451 HFRLEADRREVE*AQTAAFVAHAGQHKPIKGKQWNKHTGARQSSCNNQNLGPHGEKSTKR 272
H +LE R V A+VA + K K+ + S + G G + +
Sbjct: 16 HLKLEVGRLVVARPNEQAYVAESSSRKTSGFKRNRNFFKKNKKSDDASKKGKIGARKKFK 75
Query: 271 QCXXXXXXXKNICFNCGKPGHFARDCTEPKK 179
K C++ G GHFA +C E K+
Sbjct: 76 XVKKDXSKLK--CYDYGNKGHFAHECIESKR 104
>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
vinifera]
Length = 478
Score = 42.0 bits (97), Expect(2) = 8e-07
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = -1
Query: 179 DFGATKHVTRDKASFVDYHRVPACSHYIDMGNGAREEVVGVGSYQLKLSTGRELLFSDV 3
D GAT+HV DK F + + + MGN A E+ G G LK+++G+EL ++V
Sbjct: 339 DTGATRHVCSDKKMFSTFEPIEN-GEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNV 396
Score = 36.6 bits (83), Expect(2) = 8e-07
Identities = 36/96 (37%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Frame = -2
Query: 445 RLEADRR--EVE*AQT-----AAFVAHAGQHKPIKGKQWNKHTGARQSSCNNQNLGPHGE 287
R+E D R E + A T A FV H GQ K NK G++ LGP G
Sbjct: 220 RIEEDNRRSEKKGAHTLNEAKANFVEH-GQSSNAKTNN-NKGKGSK--------LGPKGG 269
Query: 286 KSTKRQCXXXXXXXKNICFNCGKPGHFARDCTEPKK 179
S K + CFNCGK GH + DC PKK
Sbjct: 270 ISKKPKFQGK-------CFNCGKQGHKSVDCRLPKK 298
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 42.7 bits (99), Expect(2) = 1e-06
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = -1
Query: 179 DFGATKHVTRDKASFVDYHRVPACSHYIDMGNGAREEVVGVGSYQLKLSTGRELLFSDV 3
D GAT+HV DK F + + + MGN A E+ G G LK+++G+EL ++V
Sbjct: 328 DTGATRHVCSDKGLFTSFEAA-SNREKLFMGNSATSEIEGQGKVALKMTSGKELTLNNV 385
Score = 35.4 bits (80), Expect(2) = 1e-06
Identities = 31/96 (32%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = -2
Query: 445 RLEADRREVE*AQTAAFV-AHAGQHKPIKGKQWNKHTGARQSSCNNQNLGPHG---EKST 278
R+E D R E + A+ +H P K K+ LGP G +K T
Sbjct: 221 RIEEDNRNAERIGAISMAKANFVEHGPKKKKK---------------KLGPKGGISKKQT 265
Query: 277 KRQCXXXXXXXKNICFNCGKPGHFARDCTEPKKTSE 170
K Q C+NC K GH A DC PKK E
Sbjct: 266 KFQ---------GKCYNCDKMGHKASDCRLPKKKRE 292
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 40.4 bits (93), Expect(2) = 2e-06
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = -1
Query: 179 DFGATKHVTRDKASFVDYHRVPACSHYIDMGNGAREEVVGVGSYQLKLSTGRELLFSDV 3
D GAT+HV DK F + + + MGN E+ G G LK+++G+EL ++V
Sbjct: 339 DTGATRHVCSDKKMFSTFEPIEN-GEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNV 396
Score = 37.0 bits (84), Expect(2) = 2e-06
Identities = 36/96 (37%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Frame = -2
Query: 445 RLEADRR--EVE*AQT-----AAFVAHAGQHKPIKGKQWNKHTGARQSSCNNQNLGPHGE 287
R+E D R E + A T A FV H GQ K NK G++ LGP G
Sbjct: 220 RIEEDNRRSEKKGAHTLNEAQANFVEH-GQSSKAKTNN-NKGKGSK--------LGPKGG 269
Query: 286 KSTKRQCXXXXXXXKNICFNCGKPGHFARDCTEPKK 179
S K + CFNCGK GH + DC PKK
Sbjct: 270 ISKKPKFQGK-------CFNCGKQGHKSVDCRLPKK 298
>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
Length = 946
Score = 40.4 bits (93), Expect(2) = 3e-06
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = -1
Query: 179 DFGATKHVTRDKASFVDYHRVPACSHYIDMGNGAREEVVGVGSYQLKLSTGRELLFSDV 3
D GAT+HV DK F + + + MGN E+ G G LK+++G+EL ++V
Sbjct: 339 DTGATRHVCSDKKMFSTFEPIEN-GEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNV 396
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 29/75 (38%), Positives = 33/75 (44%)
Frame = -2
Query: 403 AAFVAHAGQHKPIKGKQWNKHTGARQSSCNNQNLGPHGEKSTKRQCXXXXXXXKNICFNC 224
A FV H GQ K NK G++ LGP G S K + CFNC
Sbjct: 241 ANFVEH-GQSSKAKTNN-NKGKGSK--------LGPKGGISKKPKFQGK-------CFNC 283
Query: 223 GKPGHFARDCTEPKK 179
GK GH + DC PKK
Sbjct: 284 GKQGHKSVDCRLPKK 298