BLASTX nr result
ID: Rehmannia25_contig00031489
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00031489
(468 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 86 7e-15
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 83 3e-14
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660... 73 3e-11
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 72 6e-11
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 72 6e-11
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 72 8e-11
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 72 1e-10
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 72 1e-10
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 70 2e-10
gb|AAB82754.1| retrofit [Oryza longistaminata] 70 3e-10
gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris] 70 4e-10
emb|CAN60100.1| hypothetical protein VITISV_021668 [Vitis vinifera] 70 4e-10
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 69 5e-10
ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi... 69 5e-10
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 69 6e-10
emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera] 69 6e-10
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 69 8e-10
ref|XP_004971816.1| PREDICTED: uncharacterized protein LOC101779... 68 1e-09
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 68 1e-09
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266... 67 2e-09
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 85.5 bits (210), Expect = 7e-15
Identities = 60/154 (38%), Positives = 74/154 (48%)
Frame = +3
Query: 6 RVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVFF 185
+V G+ + I HIG S SP S P LL +LLHVP ITKNLLSVS+FAKD VFF
Sbjct: 397 QVHVGNGTGLSIKHIGQSEFLSPFSSKP--LLLNHLLHVPSITKNLLSVSKFAKDNKVFF 454
Query: 186 EFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSYSKST 365
EFH C VK+ Y+F +S + P + PS S S
Sbjct: 455 EFHSDSCFVKDQVTQAVLMVGKVRDGLYAF---DSSHLALRPTQSLSKSPSVVAS---SF 508
Query: 366 AHIVNSAEMKKKLDLETWHYRLGHASYDVVKKAL 467
+ V + + DL WH RLGH S +K L
Sbjct: 509 SSKVCTTSLSSTFDL--WHKRLGHPSAATIKNVL 540
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 83.2 bits (204), Expect = 3e-14
Identities = 60/163 (36%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFL------LKNLLHVPQITKNLLSVSQFA 164
+ V G + I HIG++ SF SF+ LK LLHVP+ITKNLLSVS+FA
Sbjct: 380 DEVFVGNGKGLPIHHIGHT-------SFSSSFIPSKTLALKQLLHVPEITKNLLSVSKFA 432
Query: 165 KDTHVFFEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQH 344
D HVFFEFHPT C VK+ S Y F D T++ P +
Sbjct: 433 ADNHVFFEFHPTSCFVKDPSTRTVLMHGQLKGGLYVF------------DNTQLKLPLHN 480
Query: 345 CSYSKSTA--HIVNSAEMKKKLDLETWHYRLGHASYDVVKKAL 467
S STA + WH RLGH S +V L
Sbjct: 481 SSCFASTALPSKEPTVPASPTSPFTLWHNRLGHPSSHIVSLVL 523
>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
Length = 868
Score = 73.2 bits (178), Expect = 3e-11
Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 3/141 (2%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPH-SFLLKNLLHVPQITKNLLSVSQFAKDTHV 179
E+V G + I IG+ + P ++PH S L+NLL VP ITKNL+SVS+FA+D V
Sbjct: 386 EQVFMGNGQGLSIHSIGS--MPFPLPNYPHMSLTLQNLLLVPHITKNLMSVSKFAQDNKV 443
Query: 180 FFEFHPTFCLVKN-ISXXXXXXXXXXXXXXYSFSLVNSRTTDILPD-TTRVNQPSQHCSY 353
FFEFHP FC+VK+ S Y F + S+ + P + + + S CS
Sbjct: 444 FFEFHPKFCVVKSQASSEVLLRGLVEADGLYKFLIPASQISKSPPSLNSCIAESSNKCSS 503
Query: 354 SKSTAHIVNSAEMKKKLDLET 416
S + + N + + L T
Sbjct: 504 SSLCSSVANENDSYNCISLCT 524
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 72.4 bits (176), Expect = 6e-11
Identities = 51/158 (32%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
E++ TA G+ +DI HIG+++V +P ++ L N+L+VPQ KNL+S SQ A D F
Sbjct: 352 EQIHTASGAGMDISHIGHTIVHTPSRNIH----LNNVLYVPQAKKNLISASQLAADNSAF 407
Query: 183 FEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSYS-- 356
E H F FS+ + T D+L + +H Y
Sbjct: 408 LELHSKF-----------------------FSIKDQVTRDVL-----LEGKCRHGLYPIP 439
Query: 357 KSTAHIVNSAEM-KKKLDLETWHYRLGHASYDVVKKAL 467
KS N + KL L WH RLGH S +VK+ +
Sbjct: 440 KSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVI 477
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 72.4 bits (176), Expect = 6e-11
Identities = 51/158 (32%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
E++ TA G+ +DI HIG+++V +P ++ L N+L+VPQ KNL+S SQ A D F
Sbjct: 352 EQIHTASGAGMDISHIGHTIVHTPSRNIH----LNNVLYVPQAKKNLISASQLAADNSAF 407
Query: 183 FEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSYS-- 356
E H F FS+ + T D+L + +H Y
Sbjct: 408 LELHSKF-----------------------FSIKDQVTRDVL-----LEGKCRHGLYPIP 439
Query: 357 KSTAHIVNSAEM-KKKLDLETWHYRLGHASYDVVKKAL 467
KS N + KL L WH RLGH S +VK+ +
Sbjct: 440 KSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVI 477
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 72.0 bits (175), Expect = 8e-11
Identities = 48/155 (30%), Positives = 70/155 (45%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
E++ TA GS +DI HIG S +++P ++ L+N+LHVP+ KNL+S + A D H F
Sbjct: 342 EQIHTASGSGMDIKHIGQSTIRTPTRNL----YLRNILHVPRTKKNLISAHRLAVDNHAF 397
Query: 183 FEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSYSKS 362
E HP F +K+ Y LP +T S SK
Sbjct: 398 VEVHPRFFAIKDQITKNTLLRGPCCNGLYP-----------LPAST---------SSSKQ 437
Query: 363 TAHIVNSAEMKKKLDLETWHYRLGHASYDVVKKAL 467
+ K + WH RLGH S+ +V+K +
Sbjct: 438 VLGAI-------KPTVSIWHSRLGHPSWQIVQKVV 465
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 71.6 bits (174), Expect = 1e-10
Identities = 45/155 (29%), Positives = 74/155 (47%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
++V G + I +IG+ + S HSF LK + HVP I+ NL+SV++F + +
Sbjct: 372 DKVTIGNGKHLSISNIGSKQLHS----HTHSFRLKKVFHVPFISANLISVAKFCSENNAL 427
Query: 183 FEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSYSKS 362
EFH VK++ Y F + +++ P ++ N + H +S +
Sbjct: 428 IEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPVF----SNLKPYSSINNASAFHSQFSST 483
Query: 363 TAHIVNSAEMKKKLDLETWHYRLGHASYDVVKKAL 467
+ N AE+ WH RLGHAS+D+V K +
Sbjct: 484 ---VENKAEL--------WHNRLGHASFDIVSKVM 507
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 71.6 bits (174), Expect = 1e-10
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
E++ TA G+ +DI H+G+S++ +P + LKN+LHVP+ KNL+S + A D H F
Sbjct: 1308 EQIHTASGAGMDIKHVGHSIIHTPICNIQ----LKNILHVPKAEKNLISAHRLAVDNHAF 1363
Query: 183 FEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSYSKS 362
E HP F F++ + T ++L + P ++ Y
Sbjct: 1364 VEVHPRF-----------------------FAIKDQVTKNLL-----LRGPCRNGLYPLP 1395
Query: 363 TAHIVNSAEMKK--KLDLETWHYRLGHASYDVVKKAL 467
T+ + S ++ K + WH RLGH S +V+K +
Sbjct: 1396 TSSLATSKQVLGAIKPTMSRWHSRLGHPSLAIVQKVV 1432
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 70.5 bits (171), Expect = 2e-10
Identities = 48/155 (30%), Positives = 71/155 (45%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
++V TA G+ ++I HIGNS+VK+P ++ LK++L+VP+ KNL+S + D F
Sbjct: 346 DQVHTASGAGMEISHIGNSVVKTPSRNLH----LKDVLYVPKANKNLVSAYKLTSDNLAF 401
Query: 183 FEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSYSKS 362
E + F +K+++ Y+ LP PS H
Sbjct: 402 IELYRKFFFIKDLAMRRTLLRGRCHKGLYA-----------LP------SPSSH------ 438
Query: 363 TAHIVNSAEMKKKLDLETWHYRLGHASYDVVKKAL 467
H V K E WH RLGH SY VV+K +
Sbjct: 439 -HHQVKQVYGVTKPSFERWHSRLGHPSYTVVEKVI 472
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 70.1 bits (170), Expect = 3e-10
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
E++ TA G+ +DI HIG+++V +P ++ L N+L+VPQ KNL+S SQ A D F
Sbjct: 348 EQIHTASGAGMDISHIGHTIVHTPSRNIH----LNNVLYVPQAKKNLISASQLAADNSAF 403
Query: 183 FEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSY--S 356
E H F FS+ + T D+L + +H Y
Sbjct: 404 LELHSKF-----------------------FSIKDQVTRDVL-----LEGKCRHGLYPIP 435
Query: 357 KSTAHIVNSAEM-KKKLDLETWHYRLGHASYDVVKKAL 467
K N + KL L WH RLGH S +VK+ +
Sbjct: 436 KFFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVI 473
>gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris]
Length = 1121
Score = 69.7 bits (169), Expect = 4e-10
Identities = 45/153 (29%), Positives = 69/153 (45%)
Frame = +3
Query: 9 VQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVFFE 188
V+ G + I HIG++ + P L +LLHVP ITKNLLSVS+F +D +V FE
Sbjct: 247 VKMGSGKGLFISHIGSANFLPSTSNKP--LFLTDLLHVPSITKNLLSVSKFCRDNNVIFE 304
Query: 189 FHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSYSKSTA 368
FH C V + Y FS + +S S+
Sbjct: 305 FHSNSCYVLDQETKRVLLQGYLKDSLYIFSDL----------------------HSLSSC 342
Query: 369 HIVNSAEMKKKLDLETWHYRLGHASYDVVKKAL 467
+ + + + + + + WH R GH S++++KK L
Sbjct: 343 SVHSMSFIAEPISVNQWHERFGHCSFNILKKIL 375
>emb|CAN60100.1| hypothetical protein VITISV_021668 [Vitis vinifera]
Length = 411
Score = 69.7 bits (169), Expect = 4e-10
Identities = 39/71 (54%), Positives = 45/71 (63%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
E+V+ G I I +IG S P S F L LLHV ITKNLLSVS+F +D +VF
Sbjct: 271 EQVRVGNGMGIFIKYIGLSQFSXPFTS--QLFSLNXLLHVLXITKNLLSVSKFXRDNNVF 328
Query: 183 FEFHPTFCLVK 215
FEFHP FCLVK
Sbjct: 329 FEFHPNFCLVK 339
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 69.3 bits (168), Expect = 5e-10
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
E++ TA G + I HIG+++V +P H+ LKN+LHVP TKNL+S S+ A+D +VF
Sbjct: 317 EKIHTANGVGMQIKHIGHALVHTPDN---HTLHLKNVLHVPHATKNLISASRLAEDNYVF 373
Query: 183 FEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSR-TTDILPDTTRVNQPSQHCSYSK 359
E H + LVK+ + Y F +++ + P R H S
Sbjct: 374 LEIHSKYFLVKDRAMRNIILKGRCRKGLYPFPSEDAKYVCSVAPSFAR-----WHSRLSH 428
Query: 360 STAHIVNSAEMKKKLDLETWH 422
T IV+ + KL + H
Sbjct: 429 PTTPIVSRVVNQNKLPCQKSH 449
>ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi|355493153|gb|AES74356.1|
Histone deacetylase [Medicago truncatula]
Length = 1775
Score = 69.3 bits (168), Expect = 5e-10
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Frame = +3
Query: 9 VQTAGGSCIDIDHIGNSMVKSPCKSFPHSFL-LKNLLHVPQITKNLLSVSQFAKDTHVFF 185
V G + I +G+ SP P + L L NLL VP ITKNL+SVSQFAKD +V+F
Sbjct: 820 VHIGNGQGLAITSVGSLQFTSPLH--PQTTLKLNNLLLVPSITKNLVSVSQFAKDNNVYF 877
Query: 186 EFHPTFCLVKNI-SXXXXXXXXXXXXXXYSFSLVNS-RTTDILPDTTRVNQ--------- 332
EFHP C VK+ S Y F NS +TT ++ + VN
Sbjct: 878 EFHPNHCFVKSQDSSKVLLRGILGHDGLYQFEHTNSFKTTALVSQNSSVNTVCNKVPAQT 937
Query: 333 ---------PSQHCSYSK----STAHIVNSAEMKKKLDLET----WHYRLGHASYDVVK 458
PS +++ + H+ +S+ + WH RLGH ++V++
Sbjct: 938 DNSASFHLGPSTGFNFNNFQCNNVEHLPSSSTYSSTQSFPSMYGIWHSRLGHPHHEVLQ 996
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 68.9 bits (167), Expect = 6e-10
Identities = 46/147 (31%), Positives = 64/147 (43%)
Frame = +3
Query: 27 SCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVFFEFHPTFC 206
S + I HIG+S + S SF L ++LH P + NLLSV +F D H +F F+P +
Sbjct: 384 SGLSIKHIGSSKLNSSSSSFH----LNDILHCPSASTNLLSVYKFTIDNHCYFIFYPNYF 439
Query: 207 LVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSYSKSTAHIVNSA 386
VK++ Y F PS+ S S A++
Sbjct: 440 CVKDLKTGKMLYHGKSENGLYPFRF-----------------PSKTSKVSSSLAYV---- 478
Query: 387 EMKKKLDLETWHYRLGHASYDVVKKAL 467
++ ETWH RLGHAS +V K L
Sbjct: 479 --SSRVSAETWHSRLGHASSTIVSKVL 503
>emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera]
Length = 410
Score = 68.9 bits (167), Expect = 6e-10
Identities = 38/72 (52%), Positives = 45/72 (62%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
++V G + I H+G S+ SP S S LK LLHVP ITKNLLSVS+FA D VF
Sbjct: 249 DQVHIGNGMDLSIKHVGQSIFSSPYTSKILS--LKQLLHVPTITKNLLSVSKFAHDNDVF 306
Query: 183 FEFHPTFCLVKN 218
FEFH C VK+
Sbjct: 307 FEFHSHSCFVKD 318
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 68.6 bits (166), Expect = 8e-10
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
E++ TA G+ +DI HIG++ V +P ++ L N+L+VPQ K+L+S SQ A D F
Sbjct: 349 EQIHTASGAGMDISHIGHTTVHTPSRNIH----LNNVLYVPQAKKSLISASQLATDNSAF 404
Query: 183 FEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPD-TTRVNQPSQHCSYSK 359
E H F FS+ + T DIL + R S+ +
Sbjct: 405 LELHSKF-----------------------FSIKDQVTKDILLEGRCRHGLYPIPKSFGR 441
Query: 360 STAHIVNSAEMKKKLDLETWHYRLGHASYDVVKKAL 467
+T+ A KL L WH RLGH S +VK+ +
Sbjct: 442 TTS---KQALGTTKLSLSRWHSRLGHPSLPIVKQVI 474
>ref|XP_004971816.1| PREDICTED: uncharacterized protein LOC101779238, partial [Setaria
italica]
Length = 1281
Score = 68.2 bits (165), Expect = 1e-09
Identities = 38/143 (26%), Positives = 69/143 (48%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
E VQ G+ + I HIG+ + + + L+N+LH+P I+K+LLS+ + A D HVF
Sbjct: 204 ETVQVGNGAHLHIMHIGSCSINTATRPLA----LENVLHIPDISKHLLSIHKLAHDNHVF 259
Query: 183 FEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSYSKS 362
FEFHP L+K+++ Y L + + +++ H +
Sbjct: 260 FEFHPYHFLIKDLAMRQILLEGKCEAGLYPIKLYDIESFKQALIHVKMSTDQWHARFGHP 319
Query: 363 TAHIVNSAEMKKKLDLETWHYRL 431
+ + +A+ + K+ ++ HY L
Sbjct: 320 STQWMYNADRRSKVFIDGLHYFL 342
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 67.8 bits (164), Expect = 1e-09
Identities = 47/155 (30%), Positives = 70/155 (45%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
+++ TA G+ + I HIG+++V +P + L N+LHVPQ KNL+S ++ A D VF
Sbjct: 246 DQIHTASGAGMKIKHIGHAIVHTPTRPLH----LNNVLHVPQAAKNLISATKLASDNSVF 301
Query: 183 FEFHPTFCLVKNISXXXXXXXXXXXXXXYSFSLVNSRTTDILPDTTRVNQPSQHCSYSKS 362
E H + L+K+ RTT +T + P +H Y
Sbjct: 302 VEIHSKYFLIKD------------------------RTT----RSTVLKGPRRHGLYPLP 333
Query: 363 TAHIVNSAEMKKKLDLETWHYRLGHASYDVVKKAL 467
+ A LE WH RLGH S +V K +
Sbjct: 334 STSSTKQA-FAVAPSLERWHSRLGHPSIPIVMKVI 367
>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
lycopersicum]
Length = 544
Score = 67.0 bits (162), Expect = 2e-09
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = +3
Query: 3 ERVQTAGGSCIDIDHIGNSMVKSPCKSFPHSFLLKNLLHVPQITKNLLSVSQFAKDTHVF 182
+++ G + I+HIG+S K C + P L +LHVP ITK+LLSVSQF KD +VF
Sbjct: 370 DQLALGNGQKLSINHIGSS--KLSCATRP--LHLNKILHVPSITKSLLSVSQFTKDNNVF 425
Query: 183 FEFHPTFCLVKN 218
EFHP+ C VK+
Sbjct: 426 MEFHPSCCFVKD 437