BLASTX nr result
ID: Rehmannia25_contig00031443
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00031443
(489 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 111 1e-22
ref|XP_002321105.1| DNA topoisomerase family protein [Populus tr... 111 1e-22
ref|XP_006358794.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 107 2e-21
ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 107 2e-21
ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 106 4e-21
ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 106 4e-21
ref|XP_006421058.1| hypothetical protein CICLE_v10005848mg [Citr... 106 4e-21
ref|XP_006421057.1| hypothetical protein CICLE_v10005848mg [Citr... 106 4e-21
gb|ABG35779.1| SRR200 [Striga asiatica] 103 2e-20
ref|XP_006410336.1| hypothetical protein EUTSA_v10016222mg [Eutr... 103 3e-20
ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 103 3e-20
gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao] 102 5e-20
ref|XP_006845101.1| hypothetical protein AMTR_s00005p00164560 [A... 102 7e-20
ref|XP_006293663.1| hypothetical protein CARUB_v10022619mg [Caps... 102 7e-20
ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 102 7e-20
ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis t... 102 7e-20
ref|NP_001031463.1| DNA topoisomerase, type IA, core [Arabidopsi... 102 7e-20
ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsi... 102 7e-20
dbj|BAD95240.1| putative DNA topoisomerase III beta [Arabidopsis... 102 7e-20
ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 101 9e-20
>ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Solanum lycopersicum]
Length = 864
Score = 111 bits (277), Expect = 1e-22
Identities = 53/68 (77%), Positives = 61/68 (89%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGKKVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQE 465
R + ICFEVIECTGF + DG+++YRARFSSVTEKDILKAMN L EPN++EAL+VDARQE
Sbjct: 117 REGENICFEVIECTGFHTSDGRRIYRARFSSVTEKDILKAMNSLAEPNRDEALSVDARQE 176
Query: 466 IDLKVGVA 489
IDLKVGVA
Sbjct: 177 IDLKVGVA 184
>ref|XP_002321105.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222861878|gb|EEE99420.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 837
Score = 111 bits (277), Expect = 1e-22
Identities = 57/69 (82%), Positives = 62/69 (89%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGK-KVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVI+CTGFQ+ D + KVYRARFSSVTEKDILKAMNCLVEPN+ EALAVDARQ
Sbjct: 91 REGENICFEVIQCTGFQANDDRRKVYRARFSSVTEKDILKAMNCLVEPNEYEALAVDARQ 150
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 151 EIDLKVGVA 159
>ref|XP_006358794.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X2 [Solanum
tuberosum]
Length = 801
Score = 107 bits (266), Expect = 2e-21
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGKKVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQE 465
R + I FEVIECTGF + DG+++YRARFSSVTEKDILKAMN LVEPN++EAL+VDARQE
Sbjct: 58 REGENISFEVIECTGFHTSDGRRIYRARFSSVTEKDILKAMNNLVEPNRDEALSVDARQE 117
Query: 466 IDLKVGVA 489
IDLKVGV+
Sbjct: 118 IDLKVGVS 125
>ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Solanum
tuberosum]
Length = 860
Score = 107 bits (266), Expect = 2e-21
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGKKVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQE 465
R + I FEVIECTGF + DG+++YRARFSSVTEKDILKAMN LVEPN++EAL+VDARQE
Sbjct: 117 REGENISFEVIECTGFHTSDGRRIYRARFSSVTEKDILKAMNNLVEPNRDEALSVDARQE 176
Query: 466 IDLKVGVA 489
IDLKVGV+
Sbjct: 177 IDLKVGVS 184
>ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X3 [Citrus
sinensis]
Length = 867
Score = 106 bits (264), Expect = 4e-21
Identities = 56/69 (81%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGK-KVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIECTGFQ D + KV+RARFSSVTEKDILKAM LVEPN+NEALAVDARQ
Sbjct: 118 REGENICFEVIECTGFQVNDARRKVHRARFSSVTEKDILKAMGNLVEPNRNEALAVDARQ 177
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 178 EIDLKVGVA 186
>ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Citrus
sinensis] gi|568880120|ref|XP_006492983.1| PREDICTED:
DNA topoisomerase 3-beta-1-like isoform X2 [Citrus
sinensis]
Length = 898
Score = 106 bits (264), Expect = 4e-21
Identities = 56/69 (81%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGK-KVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIECTGFQ D + KV+RARFSSVTEKDILKAM LVEPN+NEALAVDARQ
Sbjct: 149 REGENICFEVIECTGFQVNDARRKVHRARFSSVTEKDILKAMGNLVEPNRNEALAVDARQ 208
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 209 EIDLKVGVA 217
>ref|XP_006421058.1| hypothetical protein CICLE_v10005848mg [Citrus clementina]
gi|557522931|gb|ESR34298.1| hypothetical protein
CICLE_v10005848mg [Citrus clementina]
Length = 220
Score = 106 bits (264), Expect = 4e-21
Identities = 56/69 (81%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGK-KVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIECTGFQ D + KV+RARFSSVTEKDILKAM LVEPN+NEALAVDARQ
Sbjct: 118 REGENICFEVIECTGFQVNDARRKVHRARFSSVTEKDILKAMGNLVEPNRNEALAVDARQ 177
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 178 EIDLKVGVA 186
>ref|XP_006421057.1| hypothetical protein CICLE_v10005848mg [Citrus clementina]
gi|557522930|gb|ESR34297.1| hypothetical protein
CICLE_v10005848mg [Citrus clementina]
Length = 220
Score = 106 bits (264), Expect = 4e-21
Identities = 56/69 (81%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGK-KVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIECTGFQ D + KV+RARFSSVTEKDILKAM LVEPN+NEALAVDARQ
Sbjct: 118 REGENICFEVIECTGFQVNDARRKVHRARFSSVTEKDILKAMGNLVEPNRNEALAVDARQ 177
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 178 EIDLKVGVA 186
>gb|ABG35779.1| SRR200 [Striga asiatica]
Length = 158
Score = 103 bits (257), Expect = 2e-20
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = -2
Query: 188 MSGLATEMEFHVLAVDDSIIDRKLIERLLKTSSYQVTVVESGVKALEFLGLLDDENTNSN 9
MSGL EM FHVLAVDDSIIDRKLIERLLKTSSYQVTVV+SGVKALEFLGLLD+++TNS
Sbjct: 1 MSGLGQEMRFHVLAVDDSIIDRKLIERLLKTSSYQVTVVDSGVKALEFLGLLDNDDTNSK 60
Query: 8 CV 3
V
Sbjct: 61 SV 62
>ref|XP_006410336.1| hypothetical protein EUTSA_v10016222mg [Eutrema salsugineum]
gi|557111505|gb|ESQ51789.1| hypothetical protein
EUTSA_v10016222mg [Eutrema salsugineum]
Length = 879
Score = 103 bits (256), Expect = 3e-20
Identities = 54/68 (79%), Positives = 59/68 (86%), Gaps = 1/68 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGK-KVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEV+ECTGF KD K KVYRARFSSVTEKDI KAM+ LVEPN++EALAVDARQ
Sbjct: 133 REGENICFEVMECTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQ 192
Query: 463 EIDLKVGV 486
EIDLKVGV
Sbjct: 193 EIDLKVGV 200
>ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
Length = 867
Score = 103 bits (256), Expect = 3e-20
Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDG-KKVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIECTGF KKVYRARFSSVTEKDILKA++ LVEPN+NEALAVDARQ
Sbjct: 118 REGENICFEVIECTGFGGNGTRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQ 177
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 178 EIDLKVGVA 186
>gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao]
Length = 868
Score = 102 bits (254), Expect = 5e-20
Identities = 54/69 (78%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGKK-VYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIECTGF + KK VYRARFSSVTEKDI KAM+ LVEPN++EALAVDARQ
Sbjct: 119 REGENICFEVIECTGFHMNEAKKRVYRARFSSVTEKDISKAMDNLVEPNRHEALAVDARQ 178
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 179 EIDLKVGVA 187
>ref|XP_006845101.1| hypothetical protein AMTR_s00005p00164560 [Amborella trichopoda]
gi|548847614|gb|ERN06776.1| hypothetical protein
AMTR_s00005p00164560 [Amborella trichopoda]
Length = 477
Score = 102 bits (253), Expect = 7e-20
Identities = 54/69 (78%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDG-KKVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIECTG DG ++VYRARFSSVTE DI KAM LVEPNKNEALAVDARQ
Sbjct: 117 REGENICFEVIECTGIHPMDGGRRVYRARFSSVTESDIRKAMQNLVEPNKNEALAVDARQ 176
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 177 EIDLKVGVA 185
>ref|XP_006293663.1| hypothetical protein CARUB_v10022619mg [Capsella rubella]
gi|482562371|gb|EOA26561.1| hypothetical protein
CARUB_v10022619mg [Capsella rubella]
Length = 864
Score = 102 bits (253), Expect = 7e-20
Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGK-KVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIE TGF KD K KVYRARFSSVTEKDI KAM+ LVEPN++EALAVDARQ
Sbjct: 119 REGENICFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQ 178
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 179 EIDLKVGVA 187
>ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Fragaria vesca subsp.
vesca]
Length = 862
Score = 102 bits (253), Expect = 7e-20
Identities = 52/68 (76%), Positives = 59/68 (86%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGKKVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQE 465
R + ICFEVI+C G ++ +KVYRARFSSVTEKDILKAM+ LVEPNK+EALAVDARQE
Sbjct: 118 REGENICFEVIDCIGHTNETKRKVYRARFSSVTEKDILKAMDNLVEPNKDEALAVDARQE 177
Query: 466 IDLKVGVA 489
IDLKVGVA
Sbjct: 178 IDLKVGVA 185
>ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
gi|330253525|gb|AEC08619.1| DNA topoisomerase, type IA,
core [Arabidopsis thaliana]
Length = 865
Score = 102 bits (253), Expect = 7e-20
Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGK-KVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIE TGF KD K KVYRARFSSVTEKDI KAM+ LVEPN++EALAVDARQ
Sbjct: 119 REGENICFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQ 178
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 179 EIDLKVGVA 187
>ref|NP_001031463.1| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
gi|51969720|dbj|BAD43552.1| putative DNA topoisomerase
III beta [Arabidopsis thaliana]
gi|51969988|dbj|BAD43686.1| putative DNA topoisomerase
III beta [Arabidopsis thaliana]
gi|330253526|gb|AEC08620.1| DNA topoisomerase, type IA,
core [Arabidopsis thaliana]
Length = 838
Score = 102 bits (253), Expect = 7e-20
Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGK-KVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIE TGF KD K KVYRARFSSVTEKDI KAM+ LVEPN++EALAVDARQ
Sbjct: 92 REGENICFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQ 151
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 152 EIDLKVGVA 160
>ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297327049|gb|EFH57469.1| DNA topoisomerase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 102 bits (253), Expect = 7e-20
Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGK-KVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIE TGF KD K KVYRARFSSVTEKDI KAM+ LVEPN++EALAVDARQ
Sbjct: 119 REGENICFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQ 178
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 179 EIDLKVGVA 187
>dbj|BAD95240.1| putative DNA topoisomerase III beta [Arabidopsis thaliana]
Length = 865
Score = 102 bits (253), Expect = 7e-20
Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDGK-KVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIE TGF KD K KVYRARFSSVTEKDI KAM+ LVEPN++EALAVDARQ
Sbjct: 119 REGENICFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQ 178
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 179 EIDLKVGVA 187
>ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
Length = 864
Score = 101 bits (252), Expect = 9e-20
Identities = 54/69 (78%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +1
Query: 286 RNEKYICFEVIECTGFQSKDG-KKVYRARFSSVTEKDILKAMNCLVEPNKNEALAVDARQ 462
R + ICFEVIEC+GF KKVYRARFSSVTEKDILKA++ LVEPN+NEALAVDARQ
Sbjct: 115 REGENICFEVIECSGFGGNGTRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQ 174
Query: 463 EIDLKVGVA 489
EIDLKVGVA
Sbjct: 175 EIDLKVGVA 183