BLASTX nr result

ID: Rehmannia25_contig00031385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00031385
         (449 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis ...    75   1e-11
gb|EOX91435.1| Basic helix-loop-helix DNA-binding superfamily pr...    59   5e-07
gb|EPS64682.1| hypothetical protein M569_10098 [Genlisea aurea]        56   4e-06
emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]    56   6e-06

>ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
           gi|302142304|emb|CBI19507.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 56/143 (39%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
 Frame = -3

Query: 405 MDIDFMKSAAEDQMEMMLMHMEKLPDFSGTY----EIPMMEFXXXXXXXXXXXXXXXXXX 238
           MDID +KSA EDQMEMM+M M+KLP+F GTY    E+P M F                  
Sbjct: 1   MDIDLLKSAPEDQMEMMMMQMDKLPEFCGTYNEMAELPSMGF-----------SGGGSAT 49

Query: 237 XXXXXXXXXNQHATFMNLQQHQPSTISFSG---GDHPPFLQVENHPSGSRWK-TDEIYGE 70
                        TF+N     PSTISF+G      P       + + +RW+ T E+ G 
Sbjct: 50  MPQIFDNPHVASPTFIN----SPSTISFNGTTPPQEPTAPAFLTNSAVARWRGTGELSG- 104

Query: 69  ICGGGASQKQWNSMAAMREMIFR 1
           +C      ++ NSMAAMREMIFR
Sbjct: 105 VCNLSTPAQKRNSMAAMREMIFR 127


>gb|EOX91435.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
           [Theobroma cacao]
          Length = 261

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
 Frame = -3

Query: 405 MDIDFMKSAAEDQMEM--MLMHMEKLPDFSGTYEIPMMEFXXXXXXXXXXXXXXXXXXXX 232
           MD+D MKS+ ED M+M  M+M MEKLP+F   +  P +                      
Sbjct: 1   MDVDMMKSSTEDHMDMMTMMMQMEKLPEFCEPFLSPSI------FPEIHFSNGTSISSIL 54

Query: 231 XXXXXXXNQHATFMNLQQHQPSTISFSGGDHP------PFLQVENHPSGSRWKTDEIYGE 70
                  N + + +N     P T+SF  G+HP      P LQ  N  + S++K    + +
Sbjct: 55  PTPPIYPNPNVSSLNTLMTPPPTLSFI-GNHPVQEPMTPPLQANNMANSSKYKYPTPFND 113

Query: 69  ICGGGASQKQWNSMAAMREMIFR 1
                +S  + NSMAAMREMIFR
Sbjct: 114 TNSYPSSVDKKNSMAAMREMIFR 136


>gb|EPS64682.1| hypothetical protein M569_10098 [Genlisea aurea]
          Length = 215

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 47/143 (32%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
 Frame = -3

Query: 405 MDIDFMKSAAEDQMEMMLMHMEKLPDFSGTY--------EIPMMEFXXXXXXXXXXXXXX 250
           MD++ MK  AE++MEMMLM M+KLPDF+GTY        +IP+M+               
Sbjct: 1   MDVELMKCEAEEEMEMMLMQMDKLPDFTGTYGGNSDDLNDIPIMD--------------- 45

Query: 249 XXXXXXXXXXXXXNQHATFMNLQQHQPSTISFSGGDHPPFLQVENHPSGSRWKTDEIYGE 70
                         +H  + N Q H     SFSG  H        HP G +         
Sbjct: 46  ------SDTHLHLLRH--YGNCQDHHH---SFSGALHGDSAHQFLHPDGDK--------- 85

Query: 69  ICGGGASQKQWNSMAAMREMIFR 1
                      NSMA MREMIFR
Sbjct: 86  ----------RNSMAVMREMIFR 98


>emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
          Length = 282

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 4/42 (9%)
 Frame = -3

Query: 405 MDIDFMKSAAEDQMEMMLMHMEKLPDFSGTY----EIPMMEF 292
           MDID +KSA EDQMEMM+M M+KLP+F GTY    E+P M F
Sbjct: 1   MDIDLLKSAPEDQMEMMMMQMDKLPEFCGTYNEMAELPSMGF 42


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