BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00031248
         (726 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW74566.1| integrase [Boechera divaricarpa]                       291   1e-76
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   285   1e-74
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   283   5e-74
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]     275   8e-72
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   274   2e-71
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   271   1e-70
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   262   7e-68
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]   261   1e-67
gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                   261   2e-67
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   261   2e-67
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   260   3e-67
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   260   3e-67
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         259   6e-67
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   259   6e-67
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             257   2e-66
gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]       255   9e-66
ref|XP_002445775.1| hypothetical protein SORBIDRAFT_07g025585 [S...   254   3e-65
gb|AGW47867.1| polyprotein [Phaseolus vulgaris]                       253   3e-65
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   253   4e-65
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   253   4e-65

>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  291 bits (745), Expect = 1e-76
 Identities = 139/240 (57%), Positives = 178/240 (74%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            C  V TPM  NEKL   DG  +ADA+ FRSLVG LIY+THTRPDI F VS +SR+M  P+
Sbjct: 912  CNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGLIYLTHTRPDICFAVSAISRFMHGPT 971

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
            K HF AAKR+LRY+  T + G+ Y    + KL+G++DSDW G V DRKSTSG++F LGS 
Sbjct: 972  KQHFGAAKRLLRYIARTAEYGLWYCSVSKFKLVGFTDSDWAGCVQDRKSTSGHVFNLGSG 1031

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
             + WSS+KQ   ALSSSEAEYTA T AACQAVWLRR+L D++ +Q  ATTIFCDNK+ I 
Sbjct: 1032 AVCWSSKKQNVTALSSSEAEYTAATAAACQAVWLRRILADIKQEQEKATTIFCDNKATIA 1091

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEKHKSQ 2
            M KNP +H R+KHI ++ HF+RDLV +  + ++Y ST+EQ AD+LTKA++  KF+  +S+
Sbjct: 1092 MNKNPAYHGRTKHISIKVHFIRDLVSEGSVTLEYCSTNEQSADVLTKALSRNKFDYFRSK 1151


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  285 bits (728), Expect = 1e-74
 Identities = 138/240 (57%), Positives = 176/240 (73%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            CK V+TPM  NEKLQ +DG  +ADA  FRSLVG LIY+THTRPDIAF V V+SR+M  PS
Sbjct: 1021 CKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPS 1080

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
            K H  AAKR+LRY+ GT   GI Y    E KL+GY+DSDW G ++DRKS SGY+F LGS 
Sbjct: 1081 KQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSXSGYMFSLGSG 1140

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
             + WSS+KQ   ALSS EAEYTA T + CQAVWLRR+L D+  +    T I+CDNK+AI 
Sbjct: 1141 AVCWSSKKQAVTALSSXEAEYTAATSSXCQAVWLRRILADINQEHEEPTVIYCDNKAAIA 1200

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEKHKSQ 2
            MTKNP +H R+KH+++R HF+RDLV +  + + Y +T+EQ AD+LTKA++ +K    +S+
Sbjct: 1201 MTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSK 1260


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  283 bits (723), Expect = 5e-74
 Identities = 138/240 (57%), Positives = 176/240 (73%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            CK V+TPM  NEKLQ +DG  +ADA  FRSLVG LIY+THTRPD AF V V+SR+M  PS
Sbjct: 930  CKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDXAFAVGVISRFMHCPS 989

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
            K H  AAKR+LRY+ GT    I Y    E KL+GY+DSDW G ++DRKSTSGY+F LGS 
Sbjct: 990  KQHLGAAKRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSG 1049

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
             + WSS+KQ   ALSSSEAEYTA T +ACQAVWLRR+L D+  +    T I+CDNK+AI 
Sbjct: 1050 AVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRRILVDINQEHEEXTVIYCDNKAAIA 1109

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEKHKSQ 2
            MTKNP +H R+KH+++R HF+RDLV +  + + Y +T+EQ AD+ TKA++ +K    +S+
Sbjct: 1110 MTKNPAYHGRTKHVBIRVHFIRDLVVEGXVVLQYCNTNEQVADVRTKALSRDKHVYFRSK 1169


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score =  275 bits (704), Expect = 8e-72
 Identities = 130/234 (55%), Positives = 181/234 (77%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            CK V+TP++ NEK + +DGA +AD +++RSLVGSL+Y+T TRPDI F  S++SRYM++PS
Sbjct: 891  CKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPS 950

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
            + +FTAAKR+LRY++GT   GI Y+   E KL+GY+DSDW G +DD KSTSGY F LGS 
Sbjct: 951  QLNFTAAKRVLRYIKGTAYYGIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSG 1010

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
            + SWS++KQ  VALSS+EAEY A + A  Q VWLRR++EDL  KQ   TTI+CD+KSAI 
Sbjct: 1011 MWSWSTKKQNIVALSSAEAEYVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIA 1070

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKF 20
            + +NPV H R+KHI +++H++R+ V ++++ +++  T EQ ADI TKA++ EKF
Sbjct: 1071 INENPVSHDRTKHIAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKF 1124


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  274 bits (701), Expect = 2e-71
 Identities = 128/238 (53%), Positives = 182/238 (76%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            CK V+TP++ NEK + +DGA + D +++RSLVGSL+Y+T TRPDI F  S++SRYM++PS
Sbjct: 897  CKSVTTPLLPNEKQKARDGADKVDPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPS 956

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
            + +FTAAKR+LRY++GT   GI Y+   E KL+GY+DSDW G +DD K TSGY F LGS 
Sbjct: 957  QLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKGTSGYAFSLGSG 1016

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
            + SWS++KQ  VALSS+EAEY A + A  Q VWLRR++EDL  KQ   TTI+CD+KSAI 
Sbjct: 1017 MCSWSTKKQNIVALSSAEAEYVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIA 1076

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEKHK 8
            +++NPV H R+KHI +++H++R+ V ++++ +++  T EQ ADI TKA++ EKF + +
Sbjct: 1077 ISENPVSHDRTKHIAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVRDR 1134


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  271 bits (694), Expect = 1e-70
 Identities = 136/240 (56%), Positives = 178/240 (74%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            C+  +TPM  NEKLQ+ DG  +A+  LFRSLVG L Y+THTRPDIAF+VSVVSR++ +P+
Sbjct: 1081 CEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVSVVSRFLQSPT 1140

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
            K HF AAKR+LRY+ GT   GI Y K    +L+G++DSD+ G +DDRKSTSG  F  GS 
Sbjct: 1141 KQHFGAAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSGSCFSFGSG 1200

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
            V++WSS+KQ+TVALS+SEAEYTA + AA QA+WLR+LLED   +Q  +T IF D+KSAI 
Sbjct: 1201 VVTWSSKKQETVALSTSEAEYTAASLAARQALWLRKLLEDFSYEQKESTEIFSDSKSAIA 1260

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEKHKSQ 2
            M KNP FH R+KHI++++HF+R LV    I + + ST+EQ ADI TK++   K E  + Q
Sbjct: 1261 MAKNPSFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTNEQAADIFTKSLPQAKHEYFRLQ 1320


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  262 bits (670), Expect = 7e-68
 Identities = 130/215 (60%), Positives = 158/215 (73%), Gaps = 2/215 (0%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            CK V+T M  NEKLQ +DG  +ADA  F SLV  LIY+THTRPDIAF V V+SR+M  PS
Sbjct: 1010 CKVVATXMNSNEKLQAEDGTERADARRFXSLVRGLIYLTHTRPDIAFPVEVISRFMHCPS 1069

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
            K H  AAKR+LRY+ GT   GI Y    E KL+GY+DSDW G ++DRKSTSGY+F LGS 
Sbjct: 1070 KQHLGAAKRLLRYIVGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSG 1129

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
             + WSS+KQ   ALSSSEAEYTA T +ACQAVWLRR+L D+  +    T I+CDNK+AI 
Sbjct: 1130 AVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIA 1189

Query: 181  MTKNPVFHARSKHIELRHHFVRDLV--GKEDINID 83
            MTKNP +H R+KH+++R HF+RDLV  G  DI +D
Sbjct: 1190 MTKNPAYHGRTKHVDIRVHFIRDLVVEGYADIVVD 1224


>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
          Length = 1283

 Score =  261 bits (668), Expect = 1e-67
 Identities = 123/236 (52%), Positives = 169/236 (71%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            C PVSTP  F  KL +  G  + D  +++ +VGSL+Y+T TRPDI  +VS++SRYM NP+
Sbjct: 1034 CNPVSTPTQFGLKLNKDHGGKKVDXIIYKQIVGSLMYLTATRPDIMHSVSLISRYMENPT 1093

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
            + HF AAK+I RYLQGTK  G+ Y+K     L+G++DSD+ G  D+R+STSGY+F LG+ 
Sbjct: 1094 ELHFLAAKKICRYLQGTKDFGLFYKKGKRSDLIGFTDSDYAGDQDNRRSTSGYVFMLGTG 1153

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
             +SWSS+KQ  V LS++EAE+ A T  ACQA+WLR++LE+L LKQ GATTIFCDN S I 
Sbjct: 1154 AVSWSSKKQPIVTLSTTEAEFVAATACACQAIWLRKILEELHLKQVGATTIFCDNSSTIK 1213

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEK 14
            ++KNPV H RSKHI+++++F+R+L     I++ Y  +  Q ADI TK +    F K
Sbjct: 1214 LSKNPVLHGRSKHIDVKYYFLRELSNDGVIDLVYCRSENQVADIFTKPLKLAAFLK 1269


>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score =  261 bits (667), Expect = 2e-67
 Identities = 125/238 (52%), Positives = 170/238 (71%)
 Frame = -3

Query: 715  PVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPSKN 536
            P +TPM  N KL + D     D SL+RSLVGSL+Y+T TRPDI F VS++SR+MTNP ++
Sbjct: 1038 PCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLSRFMTNPKRS 1097

Query: 535  HFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSNVI 356
            H+ A KR+LRY+ GT   GI Y+K  E  L G+ DSDW G+VDD +STSGY+F +GS V 
Sbjct: 1098 HWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHRSTSGYVFSMGSGVF 1157

Query: 355  SWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAILMT 176
            SW+S+KQ  V LS++EAEY ++  A CQA+WLR +L++L+  Q   T +FCDN SAI ++
Sbjct: 1158 SWTSKKQSVVTLSTTEAEYISLAAAGCQALWLRWMLKELKCTQKCETVLFCDNGSAIALS 1217

Query: 175  KNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEKHKSQ 2
            KNPVFH RSKHI +++HF++DLV   ++ + Y  T +Q ADI TKA  F+ F K + +
Sbjct: 1218 KNPVFHGRSKHIRIKYHFIKDLVKDGEVIVKYCKTQDQVADIFTKAQKFDLFVKFRGK 1275


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  261 bits (667), Expect = 2e-67
 Identities = 126/233 (54%), Positives = 171/233 (73%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            C  VSTP++ NEKL+++DG    D + FRSLVG+L+Y+T TRPDI F  S++SR+M  PS
Sbjct: 1171 CNXVSTPLVVNEKLRKEDGGKMVDETHFRSLVGNLLYLTATRPDIMFAASLLSRFMHYPS 1230

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
              H  AAKR+LRYLQGT + GI Y +  E KL+G+ DSDW G +DD KSTSGY F LGS 
Sbjct: 1231 HLHLGAAKRVLRYLQGTVELGIKYFRNIEVKLIGHCDSDWGGCIDDMKSTSGYAFSLGSG 1290

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
            VISW S+KQ +VA SS+EAEY + + A  QA+WLRR+LED++ KQ  AT + CDNKSAI 
Sbjct: 1291 VISWVSKKQGSVAQSSAEAEYISASLATSQAIWLRRILEDIKEKQNEATYLLCDNKSAIA 1350

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEK 23
            + KN VFH+R++HI +++HF+++++   ++ + Y  + EQ ADI TKA+  EK
Sbjct: 1351 IAKNXVFHSRTRHIAVKYHFIKEVISDGEVQLMYCKSEEQXADIFTKALPLEK 1403


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  260 bits (665), Expect = 3e-67
 Identities = 127/237 (53%), Positives = 163/237 (68%)
 Frame = -3

Query: 715  PVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPSKN 536
            PV TPM    KL +K+     D + F+SLVGSL Y+T TRPDI + V VVSRYM +P+  
Sbjct: 1101 PVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTT 1160

Query: 535  HFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSNVI 356
            HF AAKRILRY++GT   G+ Y    + KL+GYSDSDW G VDDRKSTSG++F +G    
Sbjct: 1161 HFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAF 1220

Query: 355  SWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAILMT 176
            +W S+KQ  V LS+ EAEY A T   C A+WLR LL++L L Q   T IF DNKSAI + 
Sbjct: 1221 TWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALA 1280

Query: 175  KNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEKHKS 5
            KNPVFH RSKHI+ R+H++R+ V K+D+ ++Y+ T +Q ADI TK +  E F K +S
Sbjct: 1281 KNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRS 1337


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  260 bits (665), Expect = 3e-67
 Identities = 127/237 (53%), Positives = 163/237 (68%)
 Frame = -3

Query: 715  PVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPSKN 536
            PV TPM    KL +K+     D + F+SLVGSL Y+T TRPDI + V VVSRYM +P+  
Sbjct: 1069 PVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTT 1128

Query: 535  HFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSNVI 356
            HF AAKRILRY++GT   G+ Y    + KL+GYSDSDW G VDDRKSTSG++F +G    
Sbjct: 1129 HFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAF 1188

Query: 355  SWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAILMT 176
            +W S+KQ  V LS+ EAEY A T   C A+WLR LL++L L Q   T IF DNKSAI + 
Sbjct: 1189 TWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALA 1248

Query: 175  KNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEKHKS 5
            KNPVFH RSKHI+ R+H++R+ V K+D+ ++Y+ T +Q ADI TK +  E F K +S
Sbjct: 1249 KNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRS 1305


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  259 bits (662), Expect = 6e-67
 Identities = 126/237 (53%), Positives = 162/237 (68%)
 Frame = -3

Query: 715  PVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPSKN 536
            PV TPM    KL +K+     D + F+SLVGSL Y+T TRPDI + V VVSRYM +P+  
Sbjct: 1101 PVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTT 1160

Query: 535  HFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSNVI 356
            HF AAKRILRY++GT   G+ Y    + KL+GYSDSDW G VDDRKSTSG++F +G    
Sbjct: 1161 HFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAF 1220

Query: 355  SWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAILMT 176
            +W S+KQ  V LS+ EAEY A T   C A+WLR LL++L L Q   T IF DNKSAI + 
Sbjct: 1221 TWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALA 1280

Query: 175  KNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEKHKS 5
            KNPVFH RSKHI+ R+H++R+ V K+D+ ++Y+ T +Q AD  TK +  E F K +S
Sbjct: 1281 KNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRS 1337


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  259 bits (662), Expect = 6e-67
 Identities = 126/237 (53%), Positives = 162/237 (68%)
 Frame = -3

Query: 715  PVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPSKN 536
            PV TPM    KL +K+     D + F+SLVGSL Y+T TRPDI + V VVSRYM +P+  
Sbjct: 1101 PVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTT 1160

Query: 535  HFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSNVI 356
            HF AAKRILRY++GT   G+ Y    + KL+GYSDSDW G VDDRKSTSG++F +G    
Sbjct: 1161 HFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAF 1220

Query: 355  SWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAILMT 176
            +W S+KQ  V LS+ EAEY A T   C A+WLR LL++L L Q   T IF DNKSAI + 
Sbjct: 1221 TWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALA 1280

Query: 175  KNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEKHKS 5
            KNPVFH RSKHI+ R+H++R+ V K+D+ ++Y+ T +Q AD  TK +  E F K +S
Sbjct: 1281 KNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRS 1337


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  257 bits (657), Expect = 2e-66
 Identities = 126/237 (53%), Positives = 162/237 (68%)
 Frame = -3

Query: 715  PVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPSKN 536
            PV TPM    KL +K+     D + F+SLVGSL Y+T TRPDI + V VVSRYM +P+  
Sbjct: 1040 PVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTT 1099

Query: 535  HFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSNVI 356
            HF AAKRILRY++GT   G+ Y    + KL+GYSDSDW   VDDRKSTSG++F +G    
Sbjct: 1100 HFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGRDVDDRKSTSGFVFYIGDTAF 1159

Query: 355  SWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAILMT 176
            +W S+KQ  V LS+ EAEY A T   C A+WLR LL++L L Q   T IF DNKSAI + 
Sbjct: 1160 TWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALA 1219

Query: 175  KNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEKHKS 5
            KNPVFH RSKHI+ R+H++R+ V K+D+ ++Y+ T +Q ADI TK +  E F K +S
Sbjct: 1220 KNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRS 1276


>gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]
          Length = 1140

 Score =  255 bits (652), Expect = 9e-66
 Identities = 122/236 (51%), Positives = 170/236 (72%)
 Frame = -3

Query: 724  KCKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNP 545
            KCKPVSTP +  EKL ++D +   DAS++RSL+GSL+Y++ TRPDI +  SV+SR+M  P
Sbjct: 888  KCKPVSTPAVQGEKLMKEDESGLVDASIYRSLIGSLLYLSATRPDIMYATSVLSRFMHLP 947

Query: 544  SKNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGS 365
            +K H  AAKRILRY++GT   G+ Y++    KLLG++DSDW GS DD KSTSGY F LGS
Sbjct: 948  TKTHLKAAKRILRYIRGTIDYGVFYKRTTSMKLLGFTDSDWAGSQDDMKSTSGYCFTLGS 1007

Query: 364  NVISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAI 185
             VI W ++KQ +VA S++EAEY A + A  QA+WLR++L DL    + AT + CDNKS +
Sbjct: 1008 GVICWCTKKQGSVAQSTAEAEYVAASGAVNQALWLRKILIDLGFHPSKATEVLCDNKSVV 1067

Query: 184  LMTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFE 17
             M KNPVFH R+KHI++++H +R+   + +++I Y    +Q ADI TKA+  ++FE
Sbjct: 1068 AMVKNPVFHGRTKHIKIKYHSIREAERENEVHILYCCGEDQLADIFTKALQKQRFE 1123


>ref|XP_002445775.1| hypothetical protein SORBIDRAFT_07g025585 [Sorghum bicolor]
            gi|241942125|gb|EES15270.1| hypothetical protein
            SORBIDRAFT_07g025585 [Sorghum bicolor]
          Length = 841

 Score =  254 bits (648), Expect = 3e-65
 Identities = 124/234 (52%), Positives = 167/234 (71%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            C P +TPM    KL +   A   D++++RS+VGSL Y+ +TRPD+A++V  +SR+M NP+
Sbjct: 590  CNPSATPMEPRVKLSKVSAAPTIDSTMYRSVVGSLRYLVNTRPDLAYSVGYISRFMENPT 649

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
              H  A KR+LRY+ GT   G LY+K+   +L GYSDSD  G +D RKSTSG +F LGSN
Sbjct: 650  TEHLAAMKRLLRYVAGTLHYGCLYKKKEHAELTGYSDSDLAGDIDTRKSTSGVLFFLGSN 709

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
            +I+W S+KQK VALSS EAEY A T  ACQ +WL RLL +L+ K+A A T+  DN+SAI 
Sbjct: 710  IITWQSQKQKIVALSSCEAEYIAATTGACQGLWLARLLAELKNKEADAVTLKIDNESAIA 769

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKF 20
            ++KNPVFH RSKHI++R+HF+R+ V +  + +  I T EQ ADILTKA+  E+F
Sbjct: 770  LSKNPVFHDRSKHIDVRYHFIRECVEENRVKLQSIRTEEQLADILTKALGRERF 823


>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
          Length = 1471

 Score =  253 bits (647), Expect = 3e-65
 Identities = 125/239 (52%), Positives = 165/239 (69%), Gaps = 3/239 (1%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            C PVS PM    KL + DG  + DAS +RSLVGSL Y+T TRPD++ +V ++SR+M  P 
Sbjct: 1098 CNPVSIPMEPGAKLSKFDGGERVDASRYRSLVGSLRYLTCTRPDLSLSVGIISRFMEEPV 1157

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
             +H+ A KR+LRY+QGT   G+ Y K  + KL+GYSDSDW G +DDRKSTSGY+F +G+ 
Sbjct: 1158 YSHWKALKRVLRYIQGTVSLGLFYSKAEDYKLVGYSDSDWCGDIDDRKSTSGYVFFMGNT 1217

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
              SW S+KQ  V LS+ EAEY A +   C A+WLR LL  ++LKQ  AT I  DNKSAI 
Sbjct: 1218 AFSWLSKKQPIVTLSTCEAEYVAASWCVCHAIWLRNLLSKMELKQLDATVIQVDNKSAIE 1277

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTK---AVTFEKFEK 14
            + KNPV H RSKHI++R HF+RD V K  + + ++++ +Q ADI TK    V F+KF+K
Sbjct: 1278 LAKNPVNHERSKHIDVRFHFIRDHVKKGIVELVHVASQDQVADIFTKPLPKVFFDKFKK 1336


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score =  253 bits (646), Expect = 4e-65
 Identities = 120/236 (50%), Positives = 168/236 (71%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            C  V  P++  +KL +       D + F+ L+GSL Y+T TRPD+ F+V++VSRYM +P+
Sbjct: 1087 CNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFSVNLVSRYMESPN 1146

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
            + H  A KRILRY+QGT   GI YE+    +L+G+ DSD+ G VDDRKSTSGY+F LG  
Sbjct: 1147 EQHLLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGG 1206

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
             I+W+S+KQ  V LS++EAE+ + +  ACQAVWLR +LE++  +Q G T +FCDN S I 
Sbjct: 1207 AIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIK 1266

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEK 14
            ++KNPV H RSKHI +R+HF+R+LV +  I +DY +T++Q ADI+TKAV  E FE+
Sbjct: 1267 LSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEE 1322


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  253 bits (646), Expect = 4e-65
 Identities = 120/236 (50%), Positives = 168/236 (71%)
 Frame = -3

Query: 721  CKPVSTPMMFNEKLQQKDGAYQADASLFRSLVGSLIYVTHTRPDIAFTVSVVSRYMTNPS 542
            C  V  P++  +KL +       D + F+ L+GSL Y+T TRPD+ F+V++VSRYM +P+
Sbjct: 1087 CNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFSVNLVSRYMESPN 1146

Query: 541  KNHFTAAKRILRYLQGTKKQGILYEKEHECKLLGYSDSDWVGSVDDRKSTSGYIFCLGSN 362
            + H  A KRILRY+QGT   GI YE+    +L+G+ DSD+ G VDDRKSTSGY+F LG  
Sbjct: 1147 EQHLLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGG 1206

Query: 361  VISWSSRKQKTVALSSSEAEYTAITDAACQAVWLRRLLEDLQLKQAGATTIFCDNKSAIL 182
             I+W+S+KQ  V LS++EAE+ + +  ACQAVWLR +LE++  +Q G T +FCDN S I 
Sbjct: 1207 AIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIK 1266

Query: 181  MTKNPVFHARSKHIELRHHFVRDLVGKEDINIDYISTSEQPADILTKAVTFEKFEK 14
            ++KNPV H RSKHI +R+HF+R+LV +  I +DY +T++Q ADI+TKAV  E FE+
Sbjct: 1267 LSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEE 1322