BLASTX nr result
ID: Rehmannia25_contig00030910
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00030910
(702 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 230 3e-58
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe... 222 8e-56
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 221 2e-55
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi... 219 9e-55
gb|AAD15377.1| putative non-LTR retroelement reverse transcripta... 218 1e-54
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 218 1e-54
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 218 1e-54
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo... 218 1e-54
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 218 2e-54
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi... 217 3e-54
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 217 3e-54
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 215 1e-53
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 215 1e-53
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 214 2e-53
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 214 2e-53
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 214 2e-53
ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291... 214 3e-53
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 212 1e-52
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 211 1e-52
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 211 1e-52
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 230 bits (587), Expect = 3e-58
Identities = 111/232 (47%), Positives = 154/232 (66%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
+S AYDR+ W +L+ ++ KMGF +S WI+ C+ + +S ++NG+ G ++P +G+RQG
Sbjct: 1001 ISTAYDRINWEYLRSIMGKMGFCSKWSEWIMMCVESVDYSVILNGEKIGPIIPGRGLRQG 1060
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLFII +E S+LI QA G KICKNAP+ISHL FADD LF +A + QA
Sbjct: 1061 DPLSPYLFIICAEGLSSLIRQAEGSGTISGAKICKNAPIISHLLFADDCFLFFKAKSGQA 1120
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
+KN+L+ Y +++GQ IN KS +F+S NV +VK I L V K+LG+P +
Sbjct: 1121 QGMKNILEMYESSSGQSINFQKSEVFYSRNVDDAVKASISQILGVQQVMGTGKYLGVPSM 1180
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
+GRS+ F +V E K+IN+W LS AGRE LIKSVL ++P YIMS +
Sbjct: 1181 VGRSRISTFKFVKERVWKKINSWSSKCLSQAGRETLIKSVLQSIPFYIMSIF 1232
>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 222 bits (566), Expect = 8e-56
Identities = 100/232 (43%), Positives = 158/232 (68%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDRVEW FL+K++ MGFP + R ++ C++T S+SFL+NG+ + + P++G+RQG
Sbjct: 995 MSKAYDRVEWEFLEKMMLAMGFPILWVRMVMDCVTTVSYSFLVNGEPTRILYPTRGLRQG 1054
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLF++ +E F+ L+ +A + Q G+ IC+ AP +SHLFFADDS +F +A+ +
Sbjct: 1055 DPLSPYLFLLCAEGFTTLLSKAERQGQLQGIVICRGAPTVSHLFFADDSFVFAKATDNNC 1114
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
+K++ + Y +GQ+IN KS + FS N+ + ++ L V S +LGLP++
Sbjct: 1115 GVLKHIFEVYEHASGQQINCQKSCVAFSANIHMDTQSRLASVLGVPRVDSHATYLGLPMM 1174
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
LGR+K F Y+ E K++ W+ LS+AG+E+L+K V ++P+Y+MSC+
Sbjct: 1175 LGRNKTVCFRYLKERVWKKLQGWREQTLSIAGKEVLLKVVAQSIPLYVMSCF 1226
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 221 bits (562), Expect = 2e-55
Identities = 104/232 (44%), Positives = 155/232 (66%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDRVEW FL+KVL K+GF +F RWI+ CI+T S+SFL+NG+ G ++P++G+RQG
Sbjct: 335 MSKAYDRVEWCFLEKVLGKLGFGDTFVRWIMHCITTVSYSFLVNGEPCGKLIPTRGLRQG 394
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
D +SPYLF++ +E S +I QA + G+K+C +AP ISHL+FADDS +F A
Sbjct: 395 DAISPYLFLLCAEVLSRMIKQAETNGEIQGVKVCTDAPSISHLYFADDSFIFSRAEERDM 454
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
+K++ Y +GQ+IN +KS++ FS NV + + L V++ K+LGLP
Sbjct: 455 LCMKDIFVTYETMSGQQINYEKSSVSFSRNVPLWKQHDLAAVLGVQRVENHEKYLGLPTE 514
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
L SK + F Y+I+ +KR W+ LS G+E+L+K+V+ ++P Y+MSC+
Sbjct: 515 LSYSKDEAFRYLIDRVRKRTQGWRDKTLSGVGKEVLLKAVIQSIPTYVMSCF 566
>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
Length = 697
Score = 219 bits (557), Expect = 9e-55
Identities = 106/232 (45%), Positives = 153/232 (65%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDRVEW FL +L ++GF ++R I++C++T ++ +NG + + P +G+RQG
Sbjct: 98 MSKAYDRVEWPFLLHMLRRLGFDEKWNRLIMNCVTTVNYKIKVNGDYTEVIKPDRGLRQG 157
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLF+I +EAFS I A + GL+IC+ AP+++HLFFADDSLL +A+ S A
Sbjct: 158 DPLSPYLFVICAEAFSAAIQAAEGSKRLCGLRICRGAPILTHLFFADDSLLLLKATESVA 217
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
+ +K ++ +Y ++GQ +N DKS + FS N+ K HTL + ++LGLP+
Sbjct: 218 NEMKQIILDYERSSGQIVNRDKSVVMFSSNMDEEEKKVFSHTLGINCIAHNDRYLGLPVF 277
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
+GRSK F Y+ E + I WK FLS AG+EILIK+V A+P Y MSC+
Sbjct: 278 IGRSKAKTFEYLKEKIWRCIQGWKEKFLSKAGKEILIKAVAQAIPTYAMSCF 329
>gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1044
Score = 218 bits (556), Expect = 1e-54
Identities = 104/233 (44%), Positives = 149/233 (63%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDR+EW F+K V+ +MGF ++ WIL CI+T S+SFL+NG + G V P +G+RQG
Sbjct: 403 MSKAYDRIEWDFIKLVMQEMGFHQTWISWILQCITTVSYSFLLNGSAQGAVTPERGLRQG 462
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSP+LFII SE S L +A+L +GL++ K P ++HL FADD++ FC +
Sbjct: 463 DPLSPFLFIICSEVLSGLCRKAQLDGSLLGLRVSKGNPRVNHLLFADDTIFFCRSDLKSC 522
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
+ +L Y +GQ IN KSAI FS +K + L LV K+LGLP +
Sbjct: 523 KTFLCILKKYEEASGQMINKSKSAITFSRKTPDHIKTEAQQILGIQLVGGLGKYLGLPKM 582
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCYR 701
GR KRD+F +++ ++R +W FLS AG+ ++KSVL+++P Y MSC++
Sbjct: 583 FGRKKRDLFNQIVDRIRQRSLSWSSRFLSTAGKTTMLKSVLASMPTYTMSCFK 635
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 218 bits (555), Expect = 1e-54
Identities = 107/232 (46%), Positives = 152/232 (65%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDR+EWSFL+ ++ K+GF + + +L+CIST S+SF+ING G++ PS+G+RQG
Sbjct: 222 MSKAYDRIEWSFLEAIMRKLGFAEQWIQLMLTCISTVSYSFVINGTPHGFLHPSRGLRQG 281
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLF++ +E + LI Q G+ IC+ AP ISHLFFADDS LF A+ +
Sbjct: 282 DPLSPYLFLLCAEGLTALIAQKEREGFLKGVSICRGAPAISHLFFADDSFLFAWANMADC 341
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
++K++LD Y GQ++N KSA+ FS NV +L + + V ++LGLP++
Sbjct: 342 MALKDILDTYERALGQQVNFQKSAVCFSKNVHRGDQLMLAQFMGIPCVDHHSQYLGLPMV 401
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
L + K F ++ E K++ WK LS AG+EILIK V A+PIY MSC+
Sbjct: 402 LDKKKGASFNHLKERLWKKLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSCF 453
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 218 bits (555), Expect = 1e-54
Identities = 105/232 (45%), Positives = 156/232 (67%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDRVEW FL++V+ KMGF + +++CIS+ SF+F +NG G + PS+G+RQG
Sbjct: 580 MSKAYDRVEWCFLERVMKKMGFCDGWIDRVMACISSVSFTFNVNGVVEGSLSPSRGLRQG 639
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DP+SPYLF++ ++AFS L+ +A + G +IC+ APV+SHLFFADDS+LF +AS +
Sbjct: 640 DPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILFTKASVQEC 699
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
S V +++ Y +GQ++NL K+ + FS +V + I + L V + K+LGLP +
Sbjct: 700 SMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTI 759
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
+GRSK+ F + E K++ WK LS G+E+LIKSV A+P Y+MS +
Sbjct: 760 IGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVF 811
>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
Length = 697
Score = 218 bits (555), Expect = 1e-54
Identities = 106/232 (45%), Positives = 152/232 (65%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDRVEW FL +L ++GF ++R I++C++T ++ +NG + + P +G+RQG
Sbjct: 98 MSKAYDRVEWPFLLHMLRRLGFDEKWNRLIMNCVTTVNYKIKVNGDYTEVIKPDRGLRQG 157
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLF+I +EAFS I A + GL+IC+ AP+++HLFFADDSLL +A+ S A
Sbjct: 158 DPLSPYLFVICAEAFSAAIQAAEGSKRLCGLRICRGAPILTHLFFADDSLLLLKATESVA 217
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
+ +K ++ +Y +GQ +N DKS + FS N+ K HTL + ++LGLP+
Sbjct: 218 NEMKQIILDYERCSGQIVNRDKSVVMFSSNMDEEEKKVFSHTLGINCIAHNDRYLGLPVF 277
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
+GRSK F Y+ E + I WK FLS AG+EILIK+V A+P Y MSC+
Sbjct: 278 IGRSKAKTFEYLKEKIWRCIQGWKEKFLSKAGKEILIKAVAQAIPTYAMSCF 329
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 218 bits (554), Expect = 2e-54
Identities = 106/233 (45%), Positives = 157/233 (67%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDRVEW FL+K+L MGF + ++SC++T S+SF+ING+ G V PS+G+RQG
Sbjct: 584 MSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQG 643
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSP+LFI++++AFS ++ Q + + G K +N P ISHL FADDSLLF A+ +
Sbjct: 644 DPLSPFLFILVADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQEC 703
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
++ ++L+ Y A +GQ+IN +KS + FS V+ K ++ L V K+LG+P L
Sbjct: 704 LTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPAL 763
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCYR 701
GRSK+ +F +++ K++ WK LS AG+E+LIK+V+ ALP Y+M Y+
Sbjct: 764 CGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYK 816
>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
gi|222630794|gb|EEE62926.1| hypothetical protein
OsJ_17731 [Oryza sativa Japonica Group]
Length = 893
Score = 217 bits (552), Expect = 3e-54
Identities = 102/232 (43%), Positives = 154/232 (66%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDRVEWSFL+K++ ++GF + + I+ C+ST ++ +NG + ++PS+G+RQG
Sbjct: 252 MSKAYDRVEWSFLEKMMVRLGFAEGWVKLIMRCVSTVTYRIKVNGDLTDQIIPSRGLRQG 311
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DP+SPYLF+I +E FS+L+ A R G+K+C+ AP +SHL FADDSLL + + A
Sbjct: 312 DPISPYLFLICAEGFSSLLYAAEERGDLSGVKVCQQAPSVSHLLFADDSLLLFKVNERSA 371
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
++N+L+ Y + +GQ +N DKS+I FS N + + + + LD K+LGLP+
Sbjct: 372 QCLQNVLNLYESCSGQIVNKDKSSIMFSKNTSQADRKMVMEILDISTEARNEKYLGLPVY 431
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
+GRS+ F Y+ E K+I WK LS AG++ILIK+V A+P + MSC+
Sbjct: 432 MGRSRAKTFAYLKERVWKKIQGWKEKLLSKAGKDILIKAVAQAIPTFAMSCF 483
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 217 bits (552), Expect = 3e-54
Identities = 100/233 (42%), Positives = 158/233 (67%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDR++W+FL++VL ++GF + RW++ C+ T S+SFLING G V+PS+G+RQG
Sbjct: 518 MSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCVCTVSYSFLINGSPQGSVVPSRGLRQG 577
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLFI+ +E S L +A+ + +G+++ + +P ++HL FADD++ FC+ + +
Sbjct: 578 DPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVARGSPQVNHLLFADDTMFFCKTNPTCC 637
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
++ N+L Y +GQ INL KSAI FS +K ++ +L K+LGLP
Sbjct: 638 GALSNILKKYELASGQSINLAKSAITFSSKTPQDIKRRVKLSLRIDNEGGIGKYLGLPEH 697
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCYR 701
GR KRD+F +++ ++R ++W FLS AG++IL+K+VLS++P Y M C++
Sbjct: 698 FGRRKRDIFSSIVDRIRQRSHSWSIRFLSSAGKQILLKAVLSSMPSYAMMCFK 750
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 215 bits (548), Expect = 1e-53
Identities = 107/233 (45%), Positives = 156/233 (66%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDRVEW FL+K+L MGF + I+SC+S+ S+SF+ING G V P++G+R G
Sbjct: 581 MSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVSYSFIINGGVCGSVTPARGLRHG 640
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLFI+I++AFS +I + Q G K ++ PVISHLFFAD SLLF AS +
Sbjct: 641 DPLSPYLFILIADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQEC 700
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
+ + +L+ Y +GQ+IN DKS + FS V+ + K ++ + L V+ +K+LG+P +
Sbjct: 701 AIIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSI 760
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCYR 701
GRS+ +F +++ K++ WK LS AG+EIL+KSV+ A+P Y+M Y+
Sbjct: 761 TGRSRTAIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYK 813
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 215 bits (547), Expect = 1e-53
Identities = 105/233 (45%), Positives = 155/233 (66%), Gaps = 1/233 (0%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
+SKAYDRVEW+FL+KV+ ++GF + +WI++C+++ S+ LING G + PS+GIRQG
Sbjct: 939 ISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIFPSRGIRQG 998
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLF+ +E SN++ +A + Q G+KI K+ ISHL FADDSL FC AS
Sbjct: 999 DPLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDSLFFCRASNQNI 1058
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGV-LVQSKIKHLGLPL 539
+ + Y +GQ+IN KS+I F + +++ Q H L G+ V+ K+LGLP
Sbjct: 1059 EQLALIFKKYEEASGQKINYAKSSIIFGQKI-PTMRRQRLHRLLGIDNVRGGGKYLGLPE 1117
Query: 540 LLGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
LGR K ++F Y++ K+R W +N+LS AG+EI+IK++ ALP+Y M+C+
Sbjct: 1118 QLGRRKVELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSMNCF 1170
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 214 bits (546), Expect = 2e-53
Identities = 100/233 (42%), Positives = 149/233 (63%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
M+KAYDRVEW FLK L + GF S+ I++C+S+ SFS ++NG P +G+RQG
Sbjct: 16 MNKAYDRVEWDFLKAALIRFGFAQSWVNLIMACVSSVSFSIVLNGCPGKSFFPGRGLRQG 75
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLF+IISE S + +A +G+K+C+ P +SH+FFADD+L F +A+
Sbjct: 76 DPLSPYLFLIISEVLSVRLTRAVQDKSLLGIKLCRRGPTLSHMFFADDALFFLKATLGNV 135
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
+ + YC +GQ IN +KS+ +FSPN + + + V+ K+LGLP L
Sbjct: 136 CRLMEIFKEYCKASGQLINGEKSSAYFSPNTPDQMSRLLGELMGFAEVEDPGKYLGLPTL 195
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCYR 701
GRSK++ GY+++ ++++ WK LS AG+EILIKSV +A+P Y M+C++
Sbjct: 196 WGRSKKEAVGYIVDRVQRKLVGWKQRSLSWAGKEILIKSVATAIPAYPMACFK 248
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 214 bits (545), Expect = 2e-53
Identities = 105/232 (45%), Positives = 150/232 (64%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDRVEWSFL+ ++ MGF + + I+ C++T S+SF++NG GYV+P +G+RQG
Sbjct: 940 MSKAYDRVEWSFLEALMKGMGFAPRWIQLIMECVTTVSYSFMLNGNPVGYVIPQRGLRQG 999
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLF++ +EA S+LI QA R+ G+ +C+ AP +SHLFFADDS LF A
Sbjct: 1000 DPLSPYLFLLCAEALSSLILQAERRNLLHGVNLCRGAPSVSHLFFADDSFLFLRADQQDC 1059
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
+ + Y +GQ+I+L+KS + FS N+ + + + L V +LGLP
Sbjct: 1060 EQLSIIFQKYEMVSGQKIHLEKSCVSFSINMDRTDQDNLAAVLGVRRVDQHDVYLGLPTH 1119
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
+GRS+R F + E K+I WK LS AG+EIL+K V A+PIY+M+C+
Sbjct: 1120 VGRSRRQCFNSLKERIWKKIQGWKAKLLSFAGKEILLKVVAQAVPIYMMNCF 1171
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 214 bits (545), Expect = 2e-53
Identities = 102/233 (43%), Positives = 155/233 (66%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
M+KAYDRVEW FL+++++ MGFP F I+ C+ + ++S L+ G G + PS+G+RQG
Sbjct: 865 MTKAYDRVEWGFLQRMMEVMGFPDRFVFLIMDCVKSVTYSVLLQGAPFGKIKPSRGLRQG 924
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DP+SPYLF+I++E S LI +A Q G+ I + AP +SHLF+ADDSLLFC+A+ +
Sbjct: 925 DPISPYLFLIVAEGLSALIRKAEREQQIHGVAIARGAPSVSHLFYADDSLLFCDATVTDC 984
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
++KN+ Y A +GQ+IN DKSAI FSP +++K LD +V ++LGLP +
Sbjct: 985 MALKNIFSTYEAASGQKINKDKSAICFSPKSPAAIKEACSAILDMPVVPCHERYLGLPTV 1044
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCYR 701
G+ K+ +F + + R++ W+ LS AG+E+LIK+V A+P Y MS ++
Sbjct: 1045 SGKDKKKLFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQ 1097
>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
subsp. vesca]
Length = 948
Score = 214 bits (544), Expect = 3e-53
Identities = 99/231 (42%), Positives = 150/231 (64%)
Frame = +3
Query: 6 SKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQGD 185
SK + +VEW FL+ L + GF + +L+C+S+ SFS ++NG+ Y PS+G+RQGD
Sbjct: 231 SKGFSQVEWDFLEAALLQFGFARPWVNLVLACVSSVSFSIVLNGKPGRYFSPSRGLRQGD 290
Query: 186 PLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQAS 365
PLSPYLF+I+SEA S + +A +G+K+C+ P +SHLFFADD+L F +A+ S S
Sbjct: 291 PLSPYLFLIVSEALSLRLTKAVNEKHLLGIKLCRGCPTLSHLFFADDALFFVKATLSNVS 350
Query: 366 SVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLLL 545
+ + + YC +GQ I+ +KS+IFFSPN + + +C + V V++ K+LGLP +
Sbjct: 351 KLAAIFEEYCRASGQVISREKSSIFFSPNTPAQMARLMCELMGFVEVENPGKYLGLPTIW 410
Query: 546 GRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
GR K+D Y+ E ++++ WK LS AG+E LIKSV +P + MSC+
Sbjct: 411 GRLKKDALSYITERINRKLDGWKEKNLSWAGKETLIKSVAMVIPSFPMSCF 461
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 212 bits (539), Expect = 1e-52
Identities = 103/232 (44%), Positives = 149/232 (64%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDRVEWSFL ++ K+GF + I+ C+ST ++ +NG+ S P +G+RQG
Sbjct: 806 MSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQG 865
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLF++ +E FS L+ + + G++IC+ AP +SHL FADDSL+ C A+ +A
Sbjct: 866 DPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEA 925
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
++ +L Y +GQ IN DKSA+ FSPN +S K + L+ + K+LGLP+
Sbjct: 926 QQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVF 985
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
+GRS+ +F Y+ E +RI WK LS AG+EILIK+V A+P + M C+
Sbjct: 986 VGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCF 1037
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 211 bits (538), Expect = 1e-52
Identities = 107/238 (44%), Positives = 149/238 (62%), Gaps = 5/238 (2%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYD+VEW+F++ +L KMGF + WI+ CI+T + LINGQ G ++P +G+RQG
Sbjct: 361 MSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLIIPERGLRQG 420
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLFI+ +E I +A ++ G+K+ +P +SHL FADDSL FC+A+ Q
Sbjct: 421 DPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQC 480
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQI-----CHTLDGVLVQSKIKHL 527
+ +L Y + +GQ+IN KS+I F V S+K I H L G+ +L
Sbjct: 481 GIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGM-----GSYL 535
Query: 528 GLPLLLGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCYR 701
GLP LG SK VF +V + + RIN W FLS G+E++IKSV + LP Y+MSC+R
Sbjct: 536 GLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFR 593
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 211 bits (538), Expect = 1e-52
Identities = 102/232 (43%), Positives = 149/232 (64%)
Frame = +3
Query: 3 MSKAYDRVEWSFLKKVLDKMGFPHSFSRWILSCISTTSFSFLINGQSSGYVLPSKGIRQG 182
MSKAYDRVEWSFL ++ K+GF + I+ C+ST ++ +NG+ S P +G+RQG
Sbjct: 833 MSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRGLRQG 892
Query: 183 DPLSPYLFIIISEAFSNLICQARLRSQFIGLKICKNAPVISHLFFADDSLLFCEASTSQA 362
DPLSPYLF++ +E FS L+ + + G++IC+ AP +SHL FADDSL+ C A+ +A
Sbjct: 893 DPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEA 952
Query: 363 SSVKNLLDNYCATTGQRINLDKSAIFFSPNVTSSVKLQICHTLDGVLVQSKIKHLGLPLL 542
++ +L Y +GQ IN DKSA+ FSPN +S K + L+ + ++LGLP+
Sbjct: 953 QQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVF 1012
Query: 543 LGRSKRDVFGYVIEATKKRINNWKHNFLSLAGREILIKSVLSALPIYIMSCY 698
+GRS+ +F Y+ E +RI WK LS AG+EILIK+V A+P + M C+
Sbjct: 1013 VGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCF 1064