BLASTX nr result

ID: Rehmannia25_contig00030844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00030844
         (436 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]    48   9e-08
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]    47   4e-07
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]    45   1e-06
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]    57   2e-06

>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
          Length = 846

 Score = 48.1 bits (113), Expect(2) = 9e-08
 Identities = 25/53 (47%), Positives = 32/53 (60%)
 Frame = -2

Query: 330 PTAMMLSPDTGTDLSWYADSRASNHVTHALGNLSLATEF*GNNKVQVGNGSGS 172
           PT+ + S D     +WY DSR SNHVT    N+  + EF G N+V VGNG+ S
Sbjct: 91  PTSEVFSDD-----NWYPDSRVSNHVTPIPANMMKSAEFAGQNQVHVGNGTVS 138



 Score = 33.5 bits (75), Expect(2) = 9e-08
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -3

Query: 182 VQDQVTKEILLRGSVKDSLYKFD-VQLLQSPADVSLVSSSQITSLISAHVTQQSNLDSFK 6
           V+DQV + +L+ G ++D LY FD   L   P     +S S + S  S+ V   S   +F 
Sbjct: 157 VKDQVIQVVLMVGKIRDGLYAFDSSHLALRPTQSLSMSPSVVASSFSSKVCTASLSSTFD 216

Query: 5   L 3
           L
Sbjct: 217 L 217


>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
          Length = 1079

 Score = 47.4 bits (111), Expect(2) = 4e-07
 Identities = 23/50 (46%), Positives = 30/50 (60%)
 Frame = -2

Query: 333 NPTAMMLSPDTGTDLSWYADSRASNHVTHALGNLSLATEF*GNNKVQVGN 184
           N   +M +P+   D +WY DS ASNHVT    NL   T + GN +V+VGN
Sbjct: 330 NMQVLMATPENICDTNWYPDSGASNHVTTNANNLVEHTPYYGNEQVRVGN 379



 Score = 32.0 bits (71), Expect(2) = 4e-07
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
 Frame = -3

Query: 176 DQVTKEILLRGSVKDSLYKFDVQLLQ----SPADVSLVSSSQITS 54
           DQV+K ++L G +K  LY FD   +Q    +P+ VSL  S  +TS
Sbjct: 380 DQVSKIVVLEGKLKGGLYAFDSSQIQLKKSAPSQVSL--SQSVTS 422


>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
          Length = 1138

 Score = 45.1 bits (105), Expect(2) = 1e-06
 Identities = 22/41 (53%), Positives = 26/41 (63%)
 Frame = -2

Query: 294 DLSWYADSRASNHVTHALGNLSLATEF*GNNKVQVGNGSGS 172
           D +WY D  ASNHVTH   NL  + EF   N+V VGNG+ S
Sbjct: 355 DDNWYPDPGASNHVTHNPANLMKSVEFARQNQVHVGNGTVS 395



 Score = 32.7 bits (73), Expect(2) = 1e-06
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -3

Query: 182 VQDQVTKEILLRGSVKDSLYKFD-VQLLQSPADVSLVSSSQITSLISAHVTQQSNLDSFK 6
           V+ QVT+ +L+ G V+D LY FD   L   P      S S + S  S+ V   S   +F 
Sbjct: 414 VKGQVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCTASLSSTFD 473

Query: 5   L 3
           L
Sbjct: 474 L 474


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/50 (48%), Positives = 36/50 (72%)
 Frame = -2

Query: 324 AMMLSPDTGTDLSWYADSRASNHVTHALGNLSLATEF*GNNKVQVGNGSG 175
           AM+ +P+   +  W+ DS A+NHVTH LGNL+   E+ GN+K+ +GNG+G
Sbjct: 254 AMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTG 303


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