BLASTX nr result
ID: Rehmannia25_contig00030839
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00030839
(448 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY19614.1| DNA-directed RNA polymerase isoform 6 [Theobroma ... 182 5e-44
gb|EOY19613.1| DNA-directed RNA polymerase isoform 5 [Theobroma ... 182 5e-44
gb|EOY19612.1| DNA-directed RNA polymerase isoform 4 [Theobroma ... 182 5e-44
gb|EOY19611.1| DNA-directed RNA polymerase isoform 3 [Theobroma ... 182 5e-44
gb|EOY19610.1| DNA-directed RNA polymerase isoform 2 [Theobroma ... 182 5e-44
gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 182 5e-44
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s... 181 9e-44
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s... 177 1e-42
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr... 177 1e-42
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s... 177 1e-42
emb|CBI35069.3| unnamed protein product [Vitis vinifera] 177 1e-42
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s... 177 2e-42
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put... 176 3e-42
gb|EMJ20786.1| hypothetical protein PRUPE_ppa023422mg, partial [... 173 2e-41
gb|EXB83245.1| DNA-directed RNA polymerase III subunit RPC2 [Mor... 169 3e-40
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s... 167 1e-39
ref|XP_004155998.1| PREDICTED: DNA-directed RNA polymerase III s... 167 2e-39
ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, par... 166 3e-39
ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, par... 166 3e-39
ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s... 162 3e-38
>gb|EOY19614.1| DNA-directed RNA polymerase isoform 6 [Theobroma cacao]
Length = 1034
Score = 182 bits (461), Expect = 5e-44
Identities = 90/135 (66%), Positives = 110/135 (81%), Gaps = 3/135 (2%)
Frame = +3
Query: 51 MVVKGDDSALFNDLQENGLD---IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 221
M +K +D L N+ + + +DKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1 MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60
Query: 222 NYFVRTQIKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLT 401
NYFV T IKKIV+AND I S +DPSIYLR+KDVRIG PS+ I+ V+EK++PH CR+SD+T
Sbjct: 61 NYFVNTGIKKIVRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMT 120
Query: 402 YAAPIYVNIEYITGS 446
YAAPI+VNIEYI GS
Sbjct: 121 YAAPIFVNIEYIQGS 135
>gb|EOY19613.1| DNA-directed RNA polymerase isoform 5 [Theobroma cacao]
Length = 1006
Score = 182 bits (461), Expect = 5e-44
Identities = 90/135 (66%), Positives = 110/135 (81%), Gaps = 3/135 (2%)
Frame = +3
Query: 51 MVVKGDDSALFNDLQENGLD---IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 221
M +K +D L N+ + + +DKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1 MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60
Query: 222 NYFVRTQIKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLT 401
NYFV T IKKIV+AND I S +DPSIYLR+KDVRIG PS+ I+ V+EK++PH CR+SD+T
Sbjct: 61 NYFVNTGIKKIVRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMT 120
Query: 402 YAAPIYVNIEYITGS 446
YAAPI+VNIEYI GS
Sbjct: 121 YAAPIFVNIEYIQGS 135
>gb|EOY19612.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao]
Length = 1034
Score = 182 bits (461), Expect = 5e-44
Identities = 90/135 (66%), Positives = 110/135 (81%), Gaps = 3/135 (2%)
Frame = +3
Query: 51 MVVKGDDSALFNDLQENGLD---IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 221
M +K +D L N+ + + +DKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1 MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60
Query: 222 NYFVRTQIKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLT 401
NYFV T IKKIV+AND I S +DPSIYLR+KDVRIG PS+ I+ V+EK++PH CR+SD+T
Sbjct: 61 NYFVNTGIKKIVRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMT 120
Query: 402 YAAPIYVNIEYITGS 446
YAAPI+VNIEYI GS
Sbjct: 121 YAAPIFVNIEYIQGS 135
>gb|EOY19611.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
Length = 1153
Score = 182 bits (461), Expect = 5e-44
Identities = 90/135 (66%), Positives = 110/135 (81%), Gaps = 3/135 (2%)
Frame = +3
Query: 51 MVVKGDDSALFNDLQENGLD---IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 221
M +K +D L N+ + + +DKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1 MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60
Query: 222 NYFVRTQIKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLT 401
NYFV T IKKIV+AND I S +DPSIYLR+KDVRIG PS+ I+ V+EK++PH CR+SD+T
Sbjct: 61 NYFVNTGIKKIVRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMT 120
Query: 402 YAAPIYVNIEYITGS 446
YAAPI+VNIEYI GS
Sbjct: 121 YAAPIFVNIEYIQGS 135
>gb|EOY19610.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
Length = 1011
Score = 182 bits (461), Expect = 5e-44
Identities = 90/135 (66%), Positives = 110/135 (81%), Gaps = 3/135 (2%)
Frame = +3
Query: 51 MVVKGDDSALFNDLQENGLD---IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 221
M +K +D L N+ + + +DKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1 MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60
Query: 222 NYFVRTQIKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLT 401
NYFV T IKKIV+AND I S +DPSIYLR+KDVRIG PS+ I+ V+EK++PH CR+SD+T
Sbjct: 61 NYFVNTGIKKIVRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMT 120
Query: 402 YAAPIYVNIEYITGS 446
YAAPI+VNIEYI GS
Sbjct: 121 YAAPIFVNIEYIQGS 135
>gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 1158
Score = 182 bits (461), Expect = 5e-44
Identities = 90/135 (66%), Positives = 110/135 (81%), Gaps = 3/135 (2%)
Frame = +3
Query: 51 MVVKGDDSALFNDLQENGLD---IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 221
M +K +D L N+ + + +DKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1 MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60
Query: 222 NYFVRTQIKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLT 401
NYFV T IKKIV+AND I S +DPSIYLR+KDVRIG PS+ I+ V+EK++PH CR+SD+T
Sbjct: 61 NYFVNTGIKKIVRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMT 120
Query: 402 YAAPIYVNIEYITGS 446
YAAPI+VNIEYI GS
Sbjct: 121 YAAPIFVNIEYIQGS 135
>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
isoform X1 [Solanum tuberosum]
gi|565393087|ref|XP_006362215.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC2-like isoform X2 [Solanum
tuberosum]
Length = 1153
Score = 181 bits (459), Expect = 9e-44
Identities = 88/128 (68%), Positives = 104/128 (81%)
Frame = +3
Query: 63 GDDSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRTQ 242
G DS + N +++ IDKQ LA+P+KN V+K+ L+PEFLKVRGLVKQHLDSFNYFVRT+
Sbjct: 2 GYDSTMSNTTEDSNQGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTE 61
Query: 243 IKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAAPIYV 422
IKKIV+AN I S +DP+IYLRY+DV IG PS+V D VTEKL P KCR+SD TYAAPIYV
Sbjct: 62 IKKIVRANQEIRSILDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYV 121
Query: 423 NIEYITGS 446
IEY TGS
Sbjct: 122 TIEYTTGS 129
>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
isoform X1 [Citrus sinensis]
gi|568883651|ref|XP_006494573.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC2-like isoform X2 [Citrus
sinensis]
Length = 1149
Score = 177 bits (450), Expect = 1e-42
Identities = 85/111 (76%), Positives = 98/111 (88%)
Frame = +3
Query: 114 DKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSRIDP 293
DKQ LAAPVK+ V+KF LLPEFLKVRGLVKQHLDSFNYFV T I+KIV+AND I S IDP
Sbjct: 17 DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDP 76
Query: 294 SIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAAPIYVNIEYITGS 446
SI+LR+KDVRIG PS+ +DGV+EKL+PH CR+SD+TYAAPI VNIEY+ GS
Sbjct: 77 SIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGS 127
>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
gi|557534507|gb|ESR45625.1| hypothetical protein
CICLE_v10000078mg [Citrus clementina]
Length = 1149
Score = 177 bits (450), Expect = 1e-42
Identities = 85/111 (76%), Positives = 98/111 (88%)
Frame = +3
Query: 114 DKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSRIDP 293
DKQ LAAPVK+ V+KF LLPEFLKVRGLVKQHLDSFNYFV T I+KIV+AND I S IDP
Sbjct: 17 DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDP 76
Query: 294 SIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAAPIYVNIEYITGS 446
SI+LR+KDVRIG PS+ +DGV+EKL+PH CR+SD+TYAAPI VNIEY+ GS
Sbjct: 77 SIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGS 127
>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
[Solanum lycopersicum]
Length = 1183
Score = 177 bits (449), Expect = 1e-42
Identities = 86/128 (67%), Positives = 103/128 (80%)
Frame = +3
Query: 63 GDDSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRTQ 242
G DS + N +++ IDKQ LA+ +KN V+K+ L+PEFLKVRGLVKQHLDSFNYFVRT+
Sbjct: 32 GYDSTMSNTTEDSNQGIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTE 91
Query: 243 IKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAAPIYV 422
IKKIV+AN I S +DP+IYLRY+DV IG PS+V D VTEKL P KCR+SD TYAAPIYV
Sbjct: 92 IKKIVRANQEIRSTLDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYV 151
Query: 423 NIEYITGS 446
I+Y TGS
Sbjct: 152 TIDYTTGS 159
>emb|CBI35069.3| unnamed protein product [Vitis vinifera]
Length = 1309
Score = 177 bits (449), Expect = 1e-42
Identities = 85/118 (72%), Positives = 100/118 (84%)
Frame = +3
Query: 93 QENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDL 272
++ + I K A PVK AV+KF LLPEFLKVRGLVKQHLDSFNYFV+T IKKIV+AND
Sbjct: 18 KQEEMSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDR 77
Query: 273 ITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAAPIYVNIEYITGS 446
I S +DPSIYLR+KDVRIG PS+ +DG++EKL+PH CR+SD+TYAAPI VNIEYITGS
Sbjct: 78 IVSSVDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGS 135
>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
vinifera]
Length = 1142
Score = 177 bits (448), Expect = 2e-42
Identities = 85/114 (74%), Positives = 98/114 (85%)
Frame = +3
Query: 105 LDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSR 284
+ I K A PVK AV+KF LLPEFLKVRGLVKQHLDSFNYFV+T IKKIV+AND I S
Sbjct: 4 MSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSS 63
Query: 285 IDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAAPIYVNIEYITGS 446
+DPSIYLR+KDVRIG PS+ +DG++EKL+PH CR+SD+TYAAPI VNIEYITGS
Sbjct: 64 VDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGS 117
>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus
communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA
polymerase III subunit, putative [Ricinus communis]
Length = 1139
Score = 176 bits (446), Expect = 3e-42
Identities = 89/128 (69%), Positives = 108/128 (84%), Gaps = 2/128 (1%)
Frame = +3
Query: 69 DSALFNDLQENGLD--IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRTQ 242
DS++ N+ ++N ++ IDKQ L AP+K+AV+KF LLPEFLKVRGLVKQHLDSFNYFV
Sbjct: 7 DSSIGNN-EQNLVEQLIDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIG 65
Query: 243 IKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAAPIYV 422
IKKIV+AND I S +DP IYLR+KDVRIGTPS ++DGV+E+LSPH CR+SD TYAAPI V
Sbjct: 66 IKKIVRANDRIVSTVDPGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILV 125
Query: 423 NIEYITGS 446
N+EYI GS
Sbjct: 126 NVEYIYGS 133
>gb|EMJ20786.1| hypothetical protein PRUPE_ppa023422mg, partial [Prunus persica]
Length = 448
Score = 173 bits (439), Expect = 2e-41
Identities = 82/112 (73%), Positives = 98/112 (87%)
Frame = +3
Query: 111 IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSRID 290
IDK+ LAAP+K+A +KF LLPEFLKVRGLVKQHLDSFNYFV T IKKIV+AND I S +D
Sbjct: 12 IDKEFLAAPIKSATDKFALLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVD 71
Query: 291 PSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAAPIYVNIEYITGS 446
PSIYLR+KD+ IG PSL +DGVTEK++PH CR+SD+TY+API V++EYI GS
Sbjct: 72 PSIYLRFKDISIGEPSLTMDGVTEKIAPHTCRLSDMTYSAPIKVDVEYIQGS 123
>gb|EXB83245.1| DNA-directed RNA polymerase III subunit RPC2 [Morus notabilis]
Length = 786
Score = 169 bits (428), Expect = 3e-40
Identities = 87/132 (65%), Positives = 102/132 (77%), Gaps = 7/132 (5%)
Frame = +3
Query: 72 SALFNDLQENGLD-------IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYF 230
+A ND E G D IDKQ LAAP+K AV+K+ LLPEFLKVRGLVKQHLDSFNYF
Sbjct: 49 TAFLND--ERGRDGTILSPAIDKQFLAAPIKRAVDKYQLLPEFLKVRGLVKQHLDSFNYF 106
Query: 231 VRTQIKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAA 410
V T+IKKIV++N I S +DPSIYLR+ DVRIG PS+ +DGV+EKL P CR+SDLTYAA
Sbjct: 107 VNTEIKKIVRSNSRIVSSVDPSIYLRFTDVRIGEPSVTMDGVSEKLDPQTCRLSDLTYAA 166
Query: 411 PIYVNIEYITGS 446
PI ++EYI GS
Sbjct: 167 PIKADVEYIHGS 178
>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
[Cucumis sativus]
Length = 1158
Score = 167 bits (423), Expect = 1e-39
Identities = 88/137 (64%), Positives = 106/137 (77%), Gaps = 5/137 (3%)
Frame = +3
Query: 51 MVVKGDDSALFND-LQENG----LDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLD 215
MVVK + A N+ L +N DIDKQ + P+K+AV+KF LLPEFLKVRGLVKQHLD
Sbjct: 1 MVVKLPEDASKNEKLGDNSNPIDSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLD 60
Query: 216 SFNYFVRTQIKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISD 395
SFNYFV T+IKKIV+AND I S DPSIYLR+ DVRIG PS+ ++ V+E ++PH CR+SD
Sbjct: 61 SFNYFVNTEIKKIVKANDRIESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSD 120
Query: 396 LTYAAPIYVNIEYITGS 446
LTYAAPI V+IEYI S
Sbjct: 121 LTYAAPILVDIEYIEES 137
>ref|XP_004155998.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like,
partial [Cucumis sativus]
Length = 392
Score = 167 bits (422), Expect = 2e-39
Identities = 88/137 (64%), Positives = 106/137 (77%), Gaps = 5/137 (3%)
Frame = +3
Query: 51 MVVKGDDSALFND-LQENG----LDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLD 215
MVVK + A N+ L +N DIDKQ + P+K+AV+KF LLPEFLKVRGLVKQHLD
Sbjct: 1 MVVKLPEDASKNEKLCDNSNPIDSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLD 60
Query: 216 SFNYFVRTQIKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISD 395
SFNYFV T+IKKIV+AND I S DPSIYLR+ DVRIG PS+ ++ V+E ++PH CR+SD
Sbjct: 61 SFNYFVNTEIKKIVKANDRIESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSD 120
Query: 396 LTYAAPIYVNIEYITGS 446
LTYAAPI V+IEYI S
Sbjct: 121 LTYAAPILVDIEYIEES 137
>ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, partial [Populus
trichocarpa] gi|550321670|gb|EEF05483.2| hypothetical
protein POPTR_0015s005302g, partial [Populus
trichocarpa]
Length = 1034
Score = 166 bits (420), Expect = 3e-39
Identities = 83/132 (62%), Positives = 105/132 (79%)
Frame = +3
Query: 51 MVVKGDDSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYF 230
MVV DS ++ ++ +D K A AAPVK+AV+KF LLPEFLK RGLVKQHLDSFNYF
Sbjct: 1 MVVVQADSLSEENVVDHLIDKQKHA-AAPVKSAVDKFQLLPEFLKGRGLVKQHLDSFNYF 59
Query: 231 VRTQIKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAA 410
+ IKKIV+AND I S +DPS+YLR+ DV+IG PS+V+D ++E+++PH CR+SD TYAA
Sbjct: 60 INIGIKKIVRANDRIVSTVDPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAA 119
Query: 411 PIYVNIEYITGS 446
PI VNIEYI+GS
Sbjct: 120 PILVNIEYISGS 131
>ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, partial [Populus
trichocarpa] gi|550321669|gb|EEF05487.2| hypothetical
protein POPTR_0015s005302g, partial [Populus
trichocarpa]
Length = 1035
Score = 166 bits (420), Expect = 3e-39
Identities = 83/132 (62%), Positives = 105/132 (79%)
Frame = +3
Query: 51 MVVKGDDSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYF 230
MVV DS ++ ++ +D K A AAPVK+AV+KF LLPEFLK RGLVKQHLDSFNYF
Sbjct: 1 MVVVQADSLSEENVVDHLIDKQKHA-AAPVKSAVDKFQLLPEFLKGRGLVKQHLDSFNYF 59
Query: 231 VRTQIKKIVQANDLITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAA 410
+ IKKIV+AND I S +DPS+YLR+ DV+IG PS+V+D ++E+++PH CR+SD TYAA
Sbjct: 60 INIGIKKIVRANDRIVSTVDPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAA 119
Query: 411 PIYVNIEYITGS 446
PI VNIEYI+GS
Sbjct: 120 PILVNIEYISGS 131
>ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
[Fragaria vesca subsp. vesca]
Length = 1163
Score = 162 bits (411), Expect = 3e-38
Identities = 77/118 (65%), Positives = 98/118 (83%)
Frame = +3
Query: 93 QENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDL 272
Q + +DIDK+ LAAP+K+A +KF L+PEFLKVRGLVKQHLDSFNYFV T IKKIV+AND
Sbjct: 27 QVHHMDIDKELLAAPIKSAKDKFALIPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDR 86
Query: 273 ITSRIDPSIYLRYKDVRIGTPSLVIDGVTEKLSPHKCRISDLTYAAPIYVNIEYITGS 446
I S +DPSI+LR+ +V I PSL DGVT +++PH CR+SD+TY+API V++EY+ GS
Sbjct: 87 IVSGVDPSIWLRFNNVYIDRPSLTTDGVTTEIAPHTCRLSDMTYSAPIRVDVEYVEGS 144