BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00030806
         (434 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398851.1| RNA polymerase beta subunit [Nicotiana tomentos...    69   7e-10
gb|AGM15015.1| RNA polymerase beta subunit (chloroplast) [Panax ...    68   1e-09
gb|AHE41629.1| RNA polymerase beta subunit protein, partial (chl...    68   1e-09
ref|YP_008964026.1| RNA polymerase beta subunit [Ajuga reptans] ...    68   1e-09
ref|YP_008815929.1| RNA polymerase beta subunit (chloroplast) [L...    68   1e-09
gb|AGW04967.1| RNA polymerase beta subunit [Vincetoxicum rossicum]     68   1e-09
gb|AGW04813.1| RNA polymerase beta subunit [Sisyranthus trichost...    68   1e-09
gb|AGW04736.1| RNA polymerase beta subunit [Orthosia scoparia]         68   1e-09
gb|AGW04659.1| RNA polymerase beta subunit [Matelea biflora]           68   1e-09
gb|AGW04582.1| RNA polymerase beta subunit [Marsdenia astephanoi...    68   1e-09
gb|AGW04510.1| RNA polymerase beta subunit [Eustegia minuta]           68   1e-09
gb|AGW04433.1| RNA polymerase beta subunit [Astephanus triflorus]      68   1e-09
gb|AGW04356.1| RNA polymerase beta subunit [Araujia sericifera]        68   1e-09
gb|AGW04279.1| RNA polymerase beta subunit [Secamone afzelii]          68   1e-09
ref|YP_008081257.1| RNA polymerase beta subunit (chloroplast) [C...    68   1e-09
ref|YP_008082573.1| RNA polymerase beta subunit (chloroplast) [U...    68   1e-09
ref|YP_007507103.1| RNA polymerase beta subunit (chloroplast) [S...    68   1e-09
ref|YP_086958.1| RNA polymerase beta subunit [Panax ginseng] gi|...    68   1e-09
ref|YP_004940502.1| rpoB gene product (chloroplast) [Boea hygrom...    68   1e-09
ref|YP_004935658.1| rpoB gene product (chloroplast) [Sesamum ind...    68   1e-09

>ref|YP_398851.1| RNA polymerase beta subunit [Nicotiana tomentosiformis]
           gi|88909146|sp|Q33C46.1|RPOB_NICTO RecName:
           Full=DNA-directed RNA polymerase subunit beta; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta; Short=RNA polymerase subunit beta
           gi|80750913|dbj|BAE47989.1| RNA polymerase beta subunit
           [Nicotiana tomentosiformis]
          Length = 1070

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQ+VK+S YAPEDRLLR I  IQ+STSK+T LKLL+GGR
Sbjct: 739 VGKLTPQVVKESSYAPEDRLLRAILGIQVSTSKETCLKLLIGGR 782


>gb|AGM15015.1| RNA polymerase beta subunit (chloroplast) [Panax ginseng]
           gi|506444541|gb|AGM15101.1| RNA polymerase beta subunit
           (chloroplast) [Panax ginseng]
           gi|506444657|gb|AGM15187.1| RNA polymerase beta subunit
           (chloroplast) [Panax ginseng]
          Length = 1071

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 740 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 783


>gb|AHE41629.1| RNA polymerase beta subunit protein, partial (chloroplast)
           [Philadelphus coronarius]
          Length = 794

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 723 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 766


>ref|YP_008964026.1| RNA polymerase beta subunit [Ajuga reptans]
           gi|558697183|gb|AHA84938.1| RNA polymerase beta subunit
           [Ajuga reptans]
          Length = 1070

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>ref|YP_008815929.1| RNA polymerase beta subunit (chloroplast) [Lindenbergia
           philippensis] gi|557136855|emb|CDI43910.1| RNA
           polymerase beta subunit (chloroplast) [Lindenbergia
           philippensis]
          Length = 1070

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>gb|AGW04967.1| RNA polymerase beta subunit [Vincetoxicum rossicum]
          Length = 1069

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>gb|AGW04813.1| RNA polymerase beta subunit [Sisyranthus trichostomus]
          Length = 1069

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>gb|AGW04736.1| RNA polymerase beta subunit [Orthosia scoparia]
          Length = 1069

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>gb|AGW04659.1| RNA polymerase beta subunit [Matelea biflora]
          Length = 1069

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>gb|AGW04582.1| RNA polymerase beta subunit [Marsdenia astephanoides]
          Length = 1069

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>gb|AGW04510.1| RNA polymerase beta subunit [Eustegia minuta]
          Length = 1069

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>gb|AGW04433.1| RNA polymerase beta subunit [Astephanus triflorus]
          Length = 1069

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>gb|AGW04356.1| RNA polymerase beta subunit [Araujia sericifera]
          Length = 1069

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>gb|AGW04279.1| RNA polymerase beta subunit [Secamone afzelii]
          Length = 1070

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>ref|YP_008081257.1| RNA polymerase beta subunit (chloroplast) [Catharanthus roseus]
           gi|474452068|gb|AGI51136.1| RNA polymerase beta subunit
           (chloroplast) [Catharanthus roseus]
          Length = 1070

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>ref|YP_008082573.1| RNA polymerase beta subunit (chloroplast) [Utricularia gibba]
           gi|498921846|gb|AGL61067.1| RNA polymerase beta subunit
           (chloroplast) [Utricularia gibba]
          Length = 1079

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 748 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 791


>ref|YP_007507103.1| RNA polymerase beta subunit (chloroplast) [Salvia miltiorrhiza]
           gi|401879734|gb|AFQ30921.1| RNA polymerase beta subunit
           (chloroplast) [Salvia miltiorrhiza]
           gi|573461943|emb|CCQ71612.1| RNA polymerase beta subunit
           (chloroplast) [Salvia miltiorrhiza]
          Length = 1070

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>ref|YP_086958.1| RNA polymerase beta subunit [Panax ginseng]
           gi|68053101|sp|Q68S14.1|RPOB_PANGI RecName:
           Full=DNA-directed RNA polymerase subunit beta; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta; Short=RNA polymerase subunit beta
           gi|51235305|gb|AAT98501.1| RNA polymerase beta subunit
           [Panax ginseng]
          Length = 1071

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 740 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 783


>ref|YP_004940502.1| rpoB gene product (chloroplast) [Boea hygrometrica]
           gi|340549399|gb|AEK53221.1| RNA polymerase beta subunit
           (chloroplast) [Boea hygrometrica]
          Length = 1070

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782


>ref|YP_004935658.1| rpoB gene product (chloroplast) [Sesamum indicum]
           gi|347448287|gb|AEO92698.1| RNA polymerase beta subunit
           (chloroplast) [Sesamum indicum]
           gi|496538593|gb|AGL45328.1| RpoB (chloroplast) [Sesamum
           indicum]
          Length = 1070

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 340 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 209
           VGKLTPQMVK+S YAPEDRLLR I  IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782