BLASTX nr result
ID: Rehmannia25_contig00030645
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00030645
(348 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGV54225.1| DNA-directed RNA polymerase I subunit rpa43-like ... 64 2e-08
ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycin... 64 3e-08
gb|EXB58395.1| putative DNA-directed RNA polymerase I subunit RP... 63 3e-08
gb|EPS66698.1| hypothetical protein M569_08078, partial [Genlise... 63 3e-08
ref|XP_004492890.1| PREDICTED: DNA-directed RNA polymerase I sub... 63 5e-08
ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I sub... 63 5e-08
ref|XP_006302682.1| hypothetical protein CARUB_v10020789mg, part... 60 3e-07
ref|XP_006435147.1| hypothetical protein CICLE_v10002352mg [Citr... 60 4e-07
ref|XP_006473630.1| PREDICTED: DNA-directed RNA polymerase I sub... 58 1e-06
ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I sub... 58 1e-06
gb|AAF87113.1|AC006434_9 F10A5.14 [Arabidopsis thaliana] 58 1e-06
gb|AAK93576.1| unknown protein [Arabidopsis thaliana] 58 1e-06
ref|NP_565115.1| DNA-directed RNA polymerase [Arabidopsis thalia... 58 1e-06
ref|XP_003624241.1| hypothetical protein MTR_7g080860 [Medicago ... 57 3e-06
ref|XP_006390285.1| hypothetical protein EUTSA_v10019169mg [Eutr... 57 3e-06
gb|EOY14977.1| DNA-directed RNA polymerases, putative isoform 1 ... 57 3e-06
gb|AFK42289.1| unknown [Lotus japonicus] 56 4e-06
ref|XP_002889036.1| hypothetical protein ARALYDRAFT_316494 [Arab... 56 4e-06
ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264... 56 4e-06
ref|XP_002301988.2| hypothetical protein POPTR_0002s02620g [Popu... 55 1e-05
>gb|AGV54225.1| DNA-directed RNA polymerase I subunit rpa43-like protein [Phaseolus
vulgaris] gi|561012820|gb|ESW11681.1| hypothetical
protein PHAVU_008G050600g [Phaseolus vulgaris]
Length = 232
Score = 63.9 bits (154), Expect = 2e-08
Identities = 26/39 (66%), Positives = 34/39 (87%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMDM 230
GT++RF VKSFDEE+LHI GSL+ DHTG + WLDKN+++
Sbjct: 144 GTMIRFLVKSFDEEILHICGSLIPDHTGSIYWLDKNLEV 182
>ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycine max]
gi|571541492|ref|XP_006601777.1| PREDICTED:
uncharacterized protein LOC100527229 isoform X1 [Glycine
max] gi|571541496|ref|XP_006601778.1| PREDICTED:
uncharacterized protein LOC100527229 isoform X2 [Glycine
max] gi|255631830|gb|ACU16282.1| unknown [Glycine max]
Length = 232
Score = 63.5 bits (153), Expect = 3e-08
Identities = 25/40 (62%), Positives = 35/40 (87%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMDME 227
GT++RF VKSFDEE+LH+ GSL+ DHTG + WLDKN++++
Sbjct: 144 GTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLDKNLEVD 183
>gb|EXB58395.1| putative DNA-directed RNA polymerase I subunit RPA43 [Morus
notabilis]
Length = 234
Score = 63.2 bits (152), Expect = 3e-08
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMD 233
GT++RF VKS DEE+LHISGSL+ HTGC+RWL K++D
Sbjct: 144 GTMIRFLVKSLDEEILHISGSLIPAHTGCIRWLAKHLD 181
>gb|EPS66698.1| hypothetical protein M569_08078, partial [Genlisea aurea]
Length = 185
Score = 63.2 bits (152), Expect = 3e-08
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMD 233
GT++RF VKSFDEE+LH++GSLLAD TG +WLDKN D
Sbjct: 143 GTMIRFIVKSFDEEMLHVTGSLLADSTGSAKWLDKNTD 180
>ref|XP_004492890.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like [Cicer
arietinum]
Length = 232
Score = 62.8 bits (151), Expect = 5e-08
Identities = 26/42 (61%), Positives = 36/42 (85%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMDMEKL 221
GT++RF+VKSFDEE+LHI GSL+ D+TG + WLDKN+++ L
Sbjct: 144 GTMIRFSVKSFDEEILHIYGSLVPDNTGSIHWLDKNLEVVSL 185
>ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform
X1 [Glycine max] gi|571479213|ref|XP_006587794.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa43-like isoform X2 [Glycine max]
gi|571479215|ref|XP_006587795.1| PREDICTED: DNA-directed
RNA polymerase I subunit rpa43-like isoform X3 [Glycine
max]
Length = 232
Score = 62.8 bits (151), Expect = 5e-08
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMDME 227
GT++RF VKSFDEE+LH+ GSL+ DHTG + WLDKN++ +
Sbjct: 144 GTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLDKNLEAD 183
>ref|XP_006302682.1| hypothetical protein CARUB_v10020789mg, partial [Capsella rubella]
gi|482571392|gb|EOA35580.1| hypothetical protein
CARUB_v10020789mg, partial [Capsella rubella]
Length = 270
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMD 233
GT+LR V+SFDEEVLHI+GSLL ++TGCV+WL+K+ +
Sbjct: 218 GTILRLQVQSFDEEVLHIAGSLLPENTGCVKWLEKHSE 255
>ref|XP_006435147.1| hypothetical protein CICLE_v10002352mg [Citrus clementina]
gi|557537269|gb|ESR48387.1| hypothetical protein
CICLE_v10002352mg [Citrus clementina]
Length = 233
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDK 242
GT++RF VKSFDEE+LHISGSL HTG +RWLDK
Sbjct: 144 GTMIRFLVKSFDEEILHISGSLKPAHTGSIRWLDK 178
>ref|XP_006473630.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform
X1 [Citrus sinensis]
Length = 233
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDK 242
GT++RF VKSFDEE+LHISGSL+ TG +RWLDK
Sbjct: 144 GTMIRFLVKSFDEEILHISGSLIPARTGSIRWLDK 178
>ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
[Cucumis sativus] gi|449476884|ref|XP_004154864.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa43-like [Cucumis sativus]
Length = 231
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKN 239
GT++R VKSFDEE+LHISGSL+ HTG + WL+KN
Sbjct: 144 GTMIRLLVKSFDEEILHISGSLVPSHTGSIHWLEKN 179
>gb|AAF87113.1|AC006434_9 F10A5.14 [Arabidopsis thaliana]
Length = 168
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMD 233
GT+LR V+SFDEEV+HI+GSLL ++TGCV+WL+K +
Sbjct: 116 GTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLEKKSE 153
>gb|AAK93576.1| unknown protein [Arabidopsis thaliana]
Length = 196
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMD 233
GT+LR V+SFDEEV+HI+GSLL ++TGCV+WL+K +
Sbjct: 144 GTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLEKKSE 181
>ref|NP_565115.1| DNA-directed RNA polymerase [Arabidopsis thaliana]
gi|42572115|ref|NP_974148.1| DNA-directed RNA polymerase
[Arabidopsis thaliana] gi|23297345|gb|AAN12946.1|
unknown protein [Arabidopsis thaliana]
gi|332197622|gb|AEE35743.1| DNA-directed RNA polymerase
[Arabidopsis thaliana] gi|332197623|gb|AEE35744.1|
DNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 196
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMD 233
GT+LR V+SFDEEV+HI+GSLL ++TGCV+WL+K +
Sbjct: 144 GTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLEKKSE 181
>ref|XP_003624241.1| hypothetical protein MTR_7g080860 [Medicago truncatula]
gi|124361023|gb|ABN08995.1| Nucleic acid-binding,
OB-fold [Medicago truncatula]
gi|355499256|gb|AES80459.1| hypothetical protein
MTR_7g080860 [Medicago truncatula]
gi|388494038|gb|AFK35085.1| unknown [Medicago
truncatula]
Length = 228
Score = 57.0 bits (136), Expect = 3e-06
Identities = 23/39 (58%), Positives = 35/39 (89%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMDM 230
GT+LRF+VKSFDEE +++ GSL+ D+TG ++WLDKN+++
Sbjct: 142 GTMLRFSVKSFDEEQIYVYGSLVPDNTGNIQWLDKNLEV 180
>ref|XP_006390285.1| hypothetical protein EUTSA_v10019169mg [Eutrema salsugineum]
gi|557086719|gb|ESQ27571.1| hypothetical protein
EUTSA_v10019169mg [Eutrema salsugineum]
Length = 196
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMD 233
GT+LR V+SFDEEVLHI+GSL+ +TGCV+WL+K +
Sbjct: 144 GTMLRLQVESFDEEVLHIAGSLMPANTGCVKWLEKQSE 181
>gb|EOY14977.1| DNA-directed RNA polymerases, putative isoform 1 [Theobroma cacao]
Length = 243
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMD 233
GT++RF VKSFDEE+LHI GSL+ HTG + WLD N++
Sbjct: 160 GTMIRFLVKSFDEEILHIIGSLMPAHTGSICWLDWNLE 197
>gb|AFK42289.1| unknown [Lotus japonicus]
Length = 232
Score = 56.2 bits (134), Expect = 4e-06
Identities = 22/38 (57%), Positives = 32/38 (84%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMD 233
G ++RF+VKSFDEE+LH+ GS + D+TG + WLDKN++
Sbjct: 144 GAMIRFSVKSFDEEILHVYGSPIPDNTGSMHWLDKNLE 181
>ref|XP_002889036.1| hypothetical protein ARALYDRAFT_316494 [Arabidopsis lyrata subsp.
lyrata] gi|297334877|gb|EFH65295.1| hypothetical protein
ARALYDRAFT_316494 [Arabidopsis lyrata subsp. lyrata]
Length = 196
Score = 56.2 bits (134), Expect = 4e-06
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMD 233
GT+LR V+SFDEEV+HI+GSLL ++TGCV+WL+ +
Sbjct: 144 GTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLENKSE 181
>ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera]
gi|302142630|emb|CBI19833.3| unnamed protein product
[Vitis vinifera]
Length = 233
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDKNMD 233
GT++RF VKS DEE+LHISGSL HTG + WLDK ++
Sbjct: 144 GTMIRFLVKSLDEEILHISGSLNPPHTGSILWLDKKLE 181
>ref|XP_002301988.2| hypothetical protein POPTR_0002s02620g [Populus trichocarpa]
gi|550344135|gb|EEE81261.2| hypothetical protein
POPTR_0002s02620g [Populus trichocarpa]
Length = 232
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = -3
Query: 346 GTVLRFTVKSFDEEVLHISGSLLADHTGCVRWLDK 242
G VLRF VKS DEE+LHISGSL+ +TG V WLDK
Sbjct: 144 GAVLRFVVKSLDEEILHISGSLIPANTGSVHWLDK 178