BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00030603
         (887 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   374   e-101
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   363   3e-98
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   361   2e-97
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]   359   9e-97
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              350   4e-94
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus...   324   3e-86
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   324   3e-86
gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Th...   323   4e-86
gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Th...   323   4e-86
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   322   9e-86
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   320   3e-85
gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus...   318   2e-84
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   318   2e-84
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   318   2e-84
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   310   6e-82
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...   307   4e-81
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   299   8e-79
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   298   2e-78
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...   295   2e-77
gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma ca...   290   4e-76

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  374 bits (960), Expect = e-101
 Identities = 194/303 (64%), Positives = 232/303 (76%), Gaps = 8/303 (2%)
 Frame = -3

Query: 885  NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASD-Y 709
            NC+  +P++ KPTFGWFH+  L++ + R+N IR S+L+   S   E+K SSEV N +D +
Sbjct: 254  NCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMF 313

Query: 708  SWKDDSGTAEANSFLTASDS-----TKKPSKKDAKR-IKILNQGLEDQNNYFSGPLLPSQ 547
             W D   T E +S +  +D      TK+  +K A+  I+ + Q      ++FSGPLLPS+
Sbjct: 314  PWGDGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAPIEFIKQ-----KSFFSGPLLPSE 368

Query: 546  VRDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDS 370
            VRDI+ RLWENE  LCS+I DI Q++   SG   GYSMFFLETILVPPIKFRPP+KG  S
Sbjct: 369  VRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQIS 428

Query: 369  VMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKD 190
            VMEHP T+LLGK+LQ+NIALGNAH NN+ERSKIISR MDLQQSINVLFD KTA  Q Q+D
Sbjct: 429  VMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRD 488

Query: 189  GTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERV 10
              SGICQ LEKKEG+FRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRLTYPE+V
Sbjct: 489  TGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKV 548

Query: 9    TPW 1
            TPW
Sbjct: 549  TPW 551


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  363 bits (933), Expect = 3e-98
 Identities = 192/297 (64%), Positives = 227/297 (76%), Gaps = 2/297 (0%)
 Frame = -3

Query: 885  NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTH-SGGGEDKPSSEVVNASDY 709
            NC+  NPKI KP+FG FH++ ++N +IR N I S R    H +GG E+ PS EVVNA++ 
Sbjct: 198  NCKAKNPKIRKPSFGRFHMD-ISNKQIRENYINSGRRFNLHDTGGSEENPSPEVVNATE- 255

Query: 708  SWKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILR 529
                  G AE +  +T++D  +  SK   ++    +  +E Q + FS   LPSQVR I+ 
Sbjct: 256  ----PLGEAETSLCVTSTDGVEN-SKARKRQGGDQSDVVEQQKDSFSVAHLPSQVRSIIE 310

Query: 528  RLWENE-PLCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPH 352
             LWENE PLC++  DIQ Q    SGK  G SMFFL++ILVPPIKFRPPAKGGDS+MEHPH
Sbjct: 311  HLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLDSILVPPIKFRPPAKGGDSIMEHPH 370

Query: 351  TLLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSGIC 172
            T+LLGK++Q+NIALGNAH+N A RSKIISRLMDLQQS+NVLFDSKTA+   QKD  SGIC
Sbjct: 371  TVLLGKVVQANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSKTASGPGQKDVGSGIC 430

Query: 171  QYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
            Q LEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPER+TPW
Sbjct: 431  QMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERLTPW 487


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  361 bits (926), Expect = 2e-97
 Identities = 190/297 (63%), Positives = 226/297 (76%), Gaps = 2/297 (0%)
 Frame = -3

Query: 885  NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTH-SGGGEDKPSSEVVNASDY 709
            NC+  NPKI KP+FG FH++ ++N +IR N I S R    H +GG E+ PS EVVNA++ 
Sbjct: 198  NCKAKNPKIRKPSFGRFHMD-ISNKQIRENYINSGRRFNLHDTGGSEENPSPEVVNATE- 255

Query: 708  SWKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILR 529
                  G AE +  +T++D  +  SK   ++    +  +E Q + FS   LPSQVR I+ 
Sbjct: 256  ----PLGEAETSLCVTSTDGVEN-SKGRKRQGGDQSDVVEQQKDSFSVAHLPSQVRSIIE 310

Query: 528  RLWENE-PLCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPH 352
             LWENE PLC++  DIQ Q    SGK  G SMFFL++ILVPP+KFRPPAKGGDS+MEHPH
Sbjct: 311  HLWENEAPLCTFFCDIQSQHRNTSGKVAGPSMFFLDSILVPPVKFRPPAKGGDSIMEHPH 370

Query: 351  TLLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSGIC 172
            T+LLGK++Q+NIALGNAH+N A RSKIISRLMDLQQS+NVLFDSKTA+   QKD  SGIC
Sbjct: 371  TVLLGKVIQANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSKTASGPGQKDVGSGIC 430

Query: 171  QYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
            Q LEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFA RLTYPER+TPW
Sbjct: 431  QMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFASRLTYPERLTPW 487


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score =  359 bits (921), Expect = 9e-97
 Identities = 193/327 (59%), Positives = 229/327 (70%), Gaps = 32/327 (9%)
 Frame = -3

Query: 885  NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASD-Y 709
            NC+  +P++ KPTFGWFH+  L++ + R+N IR S+L+   S   E+K SSEV N +D +
Sbjct: 274  NCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMF 333

Query: 708  SWKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLE--DQNNYFSGPLLPSQV--- 544
             W D   T E +S +  +D  +    K  +R K     +E   Q ++FSGPLLPS+V   
Sbjct: 334  PWGDGVDTDETHSSIAPTDGIQDTVTKXLER-KGAQAPIEFIKQKSFFSGPLLPSEVCFL 392

Query: 543  -------------------------RDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGY 442
                                     RDI+ RLWENE  LCS+I DI Q++   SG   GY
Sbjct: 393  XALEHHHQLPWLMSVVVVNYVVTKVRDIMERLWENEAELCSFISDILQERLGASGNKAGY 452

Query: 441  SMFFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISR 262
            SMFFLETILVPPIKFRPP+KG  SVMEHP T+LLGK+LQ+NIALGNAH NN+ERSKIISR
Sbjct: 453  SMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISR 512

Query: 261  LMDLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPD 82
             MDLQQSINVLFD KTA  Q Q+D  SGICQ LEKKEG+FRQKMMGKRVNFACRSVISPD
Sbjct: 513  WMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPD 572

Query: 81   PYLSVNEIGIPPYFALRLTYPERVTPW 1
            PYL+VNEIGIPPYFALRLTYPE+VTPW
Sbjct: 573  PYLAVNEIGIPPYFALRLTYPEKVTPW 599


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  350 bits (898), Expect = 4e-94
 Identities = 182/297 (61%), Positives = 217/297 (73%), Gaps = 2/297 (0%)
 Frame = -3

Query: 885  NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 706
            NC+  +P++ KPTFGWFH+  L++ + R+N IR S+L+   +G   D+  S +       
Sbjct: 205  NCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLNGVDTDETHSSIAPTDGIQ 264

Query: 705  WKDDSGTAEANSFLTASDSTKKPSKKDAKR-IKILNQGLEDQNNYFSGPLLPSQVRDILR 529
                               TK+  +K A+  I+ + Q      ++FSGPLLPS+VRDI+ 
Sbjct: 265  ----------------DTVTKRLERKGAQAPIEFIKQ-----KSFFSGPLLPSEVRDIME 303

Query: 528  RLWENEP-LCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPH 352
            RLWENE  LCS+I DI Q++   SG   GYSMFFLETILVPPIKFRPP+KG  SVMEHP 
Sbjct: 304  RLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQ 363

Query: 351  TLLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSGIC 172
            T+LLGK+LQ+NIALGNAH NN+ERSKIISR MDLQQSINVLFD KTA  Q Q+D  SGIC
Sbjct: 364  TVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGIC 423

Query: 171  QYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
            Q LEKKEG+FRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRLTYPE+VTPW
Sbjct: 424  QLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPW 480


>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
          Length = 1770

 Score =  324 bits (830), Expect = 3e-86
 Identities = 172/296 (58%), Positives = 209/296 (70%), Gaps = 1/296 (0%)
 Frame = -3

Query: 885 NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 706
           NCE     I +P FGW ++ R++    R+N IR+S+L+   S G E  P  E++N  D +
Sbjct: 137 NCEAHRLTITQPVFGWLNMERISGARARANVIRNSKLEGPFSDG-ESLPEEEIIN--DVT 193

Query: 705 WKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILRR 526
             D     +     T + STK    K  K   +  + L+    +  GP+LPS V++++R 
Sbjct: 194 SPDSDADTD-----TPATSTKSHRSKGGK---VPREYLKQTETFSGGPMLPSDVKEMIRL 245

Query: 525 LWENE-PLCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPHT 349
           LWENE  LC+YI DIQ Q     G    +SMFFLETILVPPIKFRPP+KGGDSVMEHPHT
Sbjct: 246 LWENEIELCTYITDIQHQGI---GNKADHSMFFLETILVPPIKFRPPSKGGDSVMEHPHT 302

Query: 348 LLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSGICQ 169
           +LL K+LQ+NI LGNAHVN  E +KI+ R MDLQQS+NV+FDSKT+T   Q++   GICQ
Sbjct: 303 VLLNKVLQANIELGNAHVNKLEYTKIVRRWMDLQQSVNVMFDSKTST--GQRNVAPGICQ 360

Query: 168 YLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
            LEKKEGIFRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRLTYPERVTPW
Sbjct: 361 LLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPW 416


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  324 bits (830), Expect = 3e-86
 Identities = 171/298 (57%), Positives = 212/298 (71%), Gaps = 3/298 (1%)
 Frame = -3

Query: 885  NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 706
            NC+  NP+I+KPTFGW H+N + + +IR+N IR   L  T SGG E+K         D  
Sbjct: 205  NCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCNLGETFSGGEEEK---------DLG 255

Query: 705  WKDDSGTAEANSFLTASDSTKKPS-KKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILR 529
               D    E +SF  A   T+  + ++  K    +  G + Q + FSGPLLPS V+DI+ 
Sbjct: 256  TSSDVDAPETHSFNGAFPGTQDTAARRHQKGSGAVPSGFKKQKDLFSGPLLPSDVKDIIE 315

Query: 528  RLWENE-PLCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPH 352
            +LWENE  LCS+I D+QQQ     GK  G+S+FFL  +LVPPIKFR P+KGGDSVMEHP 
Sbjct: 316  KLWENEFELCSFISDMQQQGF---GKKAGHSIFFLGVVLVPPIKFRLPSKGGDSVMEHPQ 372

Query: 351  TLLLGKLLQSNIALGNAHVNNAERSKII-SRLMDLQQSINVLFDSKTATSQAQKDGTSGI 175
            T+LL K+LQ+NI L NA+VN  + +K+I +R M+LQQS+NVLFD K A  Q  +D  SGI
Sbjct: 373  TVLLSKVLQANIYLANAYVNQPDNAKVIVARWMNLQQSVNVLFDGKNAAGQ--RDVASGI 430

Query: 174  CQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
            CQ LEKKEG+FRQK+MGKRVN+ACRSVISPDPYL+VNEIGIPPYFALRLTYPERVTPW
Sbjct: 431  CQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPW 488


>gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  323 bits (829), Expect = 4e-86
 Identities = 178/303 (58%), Positives = 211/303 (69%), Gaps = 8/303 (2%)
 Frame = -3

Query: 885  NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 706
            NC+  NP I KP FGW H+N +   ++R N IR  ++  T S    D+  S + +A D S
Sbjct: 198  NCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFS----DEAGSGLEDADDVS 253

Query: 705  WKDDS------GTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQV 544
               +        T+E     +  +  K   KK    ++ + Q      N FSGPLLPS+V
Sbjct: 254  SSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFMKQ-----KNLFSGPLLPSEV 308

Query: 543  RDILRRLWENE-PLCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSV 367
            + I + LWENE  LCS I DIQQQ     GK  GYSMFFLETILVPPIKFR P KGGDSV
Sbjct: 309  KKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILVPPIKFRAPTKGGDSV 365

Query: 366  MEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRL-MDLQQSINVLFDSKTATSQAQKD 190
            MEHP T+LL K+LQ+NI+LGNA+ NN + SK + RL MDLQQS+N+LFDSKTA SQ  +D
Sbjct: 366  MEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQG-RD 424

Query: 189  GTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERV 10
             +SGICQ LEKKEG+FRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRLTYPERV
Sbjct: 425  VSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 484

Query: 9    TPW 1
            TPW
Sbjct: 485  TPW 487


>gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  323 bits (829), Expect = 4e-86
 Identities = 178/303 (58%), Positives = 211/303 (69%), Gaps = 8/303 (2%)
 Frame = -3

Query: 885  NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 706
            NC+  NP I KP FGW H+N +   ++R N IR  ++  T S    D+  S + +A D S
Sbjct: 198  NCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFS----DEAGSGLEDADDVS 253

Query: 705  WKDDS------GTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQV 544
               +        T+E     +  +  K   KK    ++ + Q      N FSGPLLPS+V
Sbjct: 254  SSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFMKQ-----KNLFSGPLLPSEV 308

Query: 543  RDILRRLWENE-PLCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSV 367
            + I + LWENE  LCS I DIQQQ     GK  GYSMFFLETILVPPIKFR P KGGDSV
Sbjct: 309  KKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILVPPIKFRAPTKGGDSV 365

Query: 366  MEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRL-MDLQQSINVLFDSKTATSQAQKD 190
            MEHP T+LL K+LQ+NI+LGNA+ NN + SK + RL MDLQQS+N+LFDSKTA SQ  +D
Sbjct: 366  MEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQG-RD 424

Query: 189  GTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERV 10
             +SGICQ LEKKEG+FRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRLTYPERV
Sbjct: 425  VSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 484

Query: 9    TPW 1
            TPW
Sbjct: 485  TPW 487


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score =  322 bits (826), Expect = 9e-86
 Identities = 171/298 (57%), Positives = 211/298 (70%), Gaps = 3/298 (1%)
 Frame = -3

Query: 885  NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 706
            NC+  NP+I+KPTFGW H+N + + +IR+N IR   L  T SGG E+K         D  
Sbjct: 205  NCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCNLGETFSGGEEEK---------DLG 255

Query: 705  WKDDSGTAEANSFLTASDSTKKPS-KKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILR 529
               D    E +SF      T+  + ++  K    +  G + Q + FSGPLLPS V+DI+ 
Sbjct: 256  ASSDVDAPETHSFNGTFPGTQDTAARRHQKGSGAVPSGFKKQKDLFSGPLLPSDVKDIIE 315

Query: 528  RLWENE-PLCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPH 352
            +LWENE  LCS+I D+QQQ     GK  G+S+FFL  +LVPPIKFR P+KGGDSVMEHP 
Sbjct: 316  KLWENEFELCSFISDMQQQGF---GKKAGHSIFFLGAVLVPPIKFRLPSKGGDSVMEHPQ 372

Query: 351  TLLLGKLLQSNIALGNAHVNNAERSKII-SRLMDLQQSINVLFDSKTATSQAQKDGTSGI 175
            T+LL K+LQ+NI L NA+VN  + +KII +R M+LQQS+NVLFD K A  Q  +D  SGI
Sbjct: 373  TVLLSKVLQANIYLANAYVNQPDNAKIIVTRWMNLQQSVNVLFDGKNAAGQ--RDMASGI 430

Query: 174  CQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
            CQ LEKKEG+FRQK+MGKRVN+ACRSVISPDPYL+VNEIGIPPYFALRLTYPERVTPW
Sbjct: 431  CQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPW 488


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  320 bits (821), Expect = 3e-85
 Identities = 174/299 (58%), Positives = 213/299 (71%), Gaps = 5/299 (1%)
 Frame = -3

Query: 882  CEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHS----GGGEDKPSSEVVNAS 715
            C   NPKI+KPTFGWFH+N L+  E R+++IRS   + T+     GGG+     ++ +A 
Sbjct: 202  CGAKNPKISKPTFGWFHMNVLSADETRADTIRSVESETTNDDISLGGGDTTDVEDITSA- 260

Query: 714  DYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDI 535
                    GTA                K+D ++ + L+  L +QN   SG LLPSQV+ I
Sbjct: 261  --------GTA----------------KRDKRKKEKLSYKLAEQNK-LSGSLLPSQVKGI 295

Query: 534  LRRLWENEP-LCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEH 358
            L  LWENE  LCSYI DIQ Q     GK  G+SMFFLE I VPPIKFRPP KGGD+VMEH
Sbjct: 296  LELLWENEARLCSYINDIQDQGF---GKKAGHSMFFLENIFVPPIKFRPPTKGGDNVMEH 352

Query: 357  PHTLLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSG 178
            P T+LL K+LQ NI+LG+AH+N ++ SK++SR MDLQQS+N+LFD+KTA+ +  +D  +G
Sbjct: 353  PQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQQSVNMLFDNKTASGK--RDVATG 410

Query: 177  ICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
            ICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRL+YPERVTPW
Sbjct: 411  ICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTPW 469


>gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  318 bits (815), Expect = 2e-84
 Identities = 173/296 (58%), Positives = 210/296 (70%), Gaps = 1/296 (0%)
 Frame = -3

Query: 885 NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 706
           NC  +NP+I+KPTFGWFH+N L++ E R+N++R+                SE +N  D S
Sbjct: 190 NCGVVNPRISKPTFGWFHMNVLSDDEARANTMRALE--------------SETIN-DDMS 234

Query: 705 WKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILRR 526
                 T E +  +T++ + K+  +K  K    L+  L  QN   SG LLPSQV+ IL  
Sbjct: 235 LGGGETTEEED--ITSTGTAKRDKRKKGK----LSSKLAAQNK-LSGSLLPSQVKGILEL 287

Query: 525 LWENEP-LCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPHT 349
           LWENE  LCSYI DIQ Q     GK  G+SMFFLE I VPPIKFRPP KGGD VMEHP T
Sbjct: 288 LWENEARLCSYISDIQDQGF---GKKAGHSMFFLENIFVPPIKFRPPTKGGDDVMEHPQT 344

Query: 348 LLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSGICQ 169
           +LL K+LQ NI+LG+AH+N  + SK++SR MDLQQS+N+LFD+KT+    Q +  +GICQ
Sbjct: 345 VLLTKVLQGNISLGDAHINKLDPSKVLSRWMDLQQSVNLLFDNKTS---GQGEVAAGICQ 401

Query: 168 YLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
            LEKKEGIFRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRL+YPERVTPW
Sbjct: 402 LLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTPW 457


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  318 bits (815), Expect = 2e-84
 Identities = 173/299 (57%), Positives = 206/299 (68%), Gaps = 4/299 (1%)
 Frame = -3

Query: 885 NCEFI---NPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNAS 715
           NC++    +PKI KPTFGWFH+  LA  + R+N+IR S            KP S    A 
Sbjct: 196 NCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRS------------KPVSVSSGAE 243

Query: 714 DYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDI 535
             S  ++  T EA    T  D             + ++  +  Q N+ SG LLPS+V+DI
Sbjct: 244 GVSSLEEETTTEA----TVED------------FEDVSPEVFMQKNFSSGHLLPSEVKDI 287

Query: 534 LRRLWENEPL-CSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEH 358
           L+RLW+NE L CS+I DI QQ     G   G+SMFFLE++LVPPIKFRPPAKGGDSVMEH
Sbjct: 288 LKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPPIKFRPPAKGGDSVMEH 344

Query: 357 PHTLLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSG 178
           P T+LL K+LQSNI+LGN H N +E SKI+   MDLQQSIN+LFDSK+A    + D + G
Sbjct: 345 PQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAAGPGKNDASLG 404

Query: 177 ICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
           ICQ LEKKEG+FRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRLTYPERVT W
Sbjct: 405 ICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAW 463


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
           sativus]
          Length = 1650

 Score =  318 bits (815), Expect = 2e-84
 Identities = 173/299 (57%), Positives = 206/299 (68%), Gaps = 4/299 (1%)
 Frame = -3

Query: 885 NCEFI---NPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNAS 715
           NC++    +PKI KPTFGWFH+  LA  + R+N+IR S            KP S    A 
Sbjct: 190 NCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRS------------KPVSVSSGAE 237

Query: 714 DYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDI 535
             S  ++  T EA    T  D             + ++  +  Q N+ SG LLPS+V+DI
Sbjct: 238 GVSSLEEETTTEA----TVED------------FEDVSPEVFMQKNFSSGHLLPSEVKDI 281

Query: 534 LRRLWENEPL-CSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEH 358
           L+RLW+NE L CS+I DI QQ     G   G+SMFFLE++LVPPIKFRPPAKGGDSVMEH
Sbjct: 282 LKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPPIKFRPPAKGGDSVMEH 338

Query: 357 PHTLLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSG 178
           P T+LL K+LQSNI+LGN H N +E SKI+   MDLQQSIN+LFDSK+A    + D + G
Sbjct: 339 PQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAAGPGKNDASLG 398

Query: 177 ICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
           ICQ LEKKEG+FRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRLTYPERVT W
Sbjct: 399 ICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAW 457


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  310 bits (793), Expect = 6e-82
 Identities = 166/296 (56%), Positives = 204/296 (68%), Gaps = 1/296 (0%)
 Frame = -3

Query: 885  NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 706
            NCE  NP I KPTFGWFH + +++  IR+N I   +L      GG     SE+   +D  
Sbjct: 207  NCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQL------GG--LLGSEIEGTTDVE 258

Query: 705  WKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILRR 526
               + G   +         TKK  KK+ K +    +    Q + FS  LLPS+V++ L  
Sbjct: 259  DAAEPGDQHSG--------TKKHKKKERKEVLEFTR----QKSTFSKQLLPSEVKEKLEL 306

Query: 525  LWENEP-LCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPHT 349
            LW+NE  +CS+I D+QQQ+     +  G +MFFLETILVPPIKFRPP KGGDSVMEHP T
Sbjct: 307  LWKNEARICSFISDLQQQE--FGKRKAGPAMFFLETILVPPIKFRPPTKGGDSVMEHPQT 364

Query: 348  LLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSGICQ 169
            +LL K+LQSNI+LG+AH+N  E SKI+ R +DLQQSIN LFDSKTA    Q++G  GICQ
Sbjct: 365  VLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLFDSKTAKGPGQREGAPGICQ 423

Query: 168  YLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
             LEKKEG+FRQKMMGKRVN+ACRSVISPDPY+ VNEIGIPP FA++LTYPERVTPW
Sbjct: 424  LLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAVKLTYPERVTPW 479


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score =  307 bits (786), Expect = 4e-81
 Identities = 174/296 (58%), Positives = 204/296 (68%), Gaps = 1/296 (0%)
 Frame = -3

Query: 885 NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 706
           NCE  +PKI  P FGWF+            +I  S    TH   G+DKPS E        
Sbjct: 191 NCESRSPKITNPIFGWFYA---------VYAIHRSSSKGTHIREGKDKPSPE-------- 233

Query: 705 WKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILRR 526
                  +EA+S + ++DS     KK +   K LN GL  Q +     LLPS+VR+++ +
Sbjct: 234 ------NSEASSSIISADSPGNSGKKGSSSNK-LNLGLVGQRH-----LLPSEVREMVMQ 281

Query: 525 LWENEP-LCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPHT 349
           LWENE  LCS+I DIQQQQ KLSG    YS+FF ETILV PIKFR P +GG+SVMEHPHT
Sbjct: 282 LWENEESLCSFICDIQQQQGKLSGNRMDYSIFFFETILVNPIKFRAPTRGGNSVMEHPHT 341

Query: 348 LLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSGICQ 169
           +LLGK+L+SNIAL      NA+ SK IS  M+LQQSINVLFD K++TS+  K G SGICQ
Sbjct: 342 VLLGKVLESNIAL-----RNAQPSKFISHWMELQQSINVLFDGKSSTSK--KAGVSGICQ 394

Query: 168 YLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
            LEKKEG+FRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRLTYPERVTPW
Sbjct: 395 LLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPW 450


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score =  299 bits (766), Expect = 8e-79
 Identities = 161/296 (54%), Positives = 201/296 (67%), Gaps = 1/296 (0%)
 Frame = -3

Query: 885  NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 706
            NC +INPKI  PTFGWFHV  L+  + R+N I           G +   +SE+++     
Sbjct: 192  NCGYINPKITIPTFGWFHVKALSAAQARANVI----------SGNDVSLASEIIHDDISL 241

Query: 705  WKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILRR 526
               D+   E    +T+ D     +K+  K  +I +  L       +G LLPSQV+ IL  
Sbjct: 242  GNGDTTDVED---ITSGDIANSNAKRHNKEKQISSHTL-------AGSLLPSQVQRILEL 291

Query: 525  LWENEP-LCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPHT 349
            LWEN+  LC YI DIQ       GK  G+SMFFLE I VPPIKFRPP KG D V EH  T
Sbjct: 292  LWENDARLCLYISDIQGLGI---GKKAGHSMFFLENIYVPPIKFRPPTKGDDKVSEHAQT 348

Query: 348  LLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSGICQ 169
            +LL ++L+SNI+LG AH+N ++ S ++ R MDLQ+S+N+LFD+KTA+ ++QKD  +GICQ
Sbjct: 349  VLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNLLFDNKTASGESQKDLVTGICQ 408

Query: 168  YLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
             LEKKEGIFRQKMMGKRVN+ACRSVISPDPYL+VNEIGIPPYFALRLTYPERVTPW
Sbjct: 409  LLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPW 464


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
           arietinum]
          Length = 1650

 Score =  298 bits (762), Expect = 2e-78
 Identities = 163/296 (55%), Positives = 200/296 (67%), Gaps = 1/296 (0%)
 Frame = -3

Query: 885 NCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 706
           NC  INPKI KPTFGWFHV  L+  + R+N I           G +   +SE+++     
Sbjct: 192 NCGNINPKITKPTFGWFHVKALSAAQARANVI----------SGIDASLASEIIHDDISL 241

Query: 705 WKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILRR 526
              D+   E    +T+ D+    +K+  K  +         +N  SG LLPSQV+ IL  
Sbjct: 242 GNGDTTDVED---ITSGDTANSNAKRQNKLAR---------HNKLSGSLLPSQVQGILEL 289

Query: 525 LWENEP-LCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPHT 349
           LWENE  LC YI DIQ Q     GK  G+SMFFL+ I VPPIKFRPP KG D V EH  T
Sbjct: 290 LWENEARLCLYISDIQGQGF---GKKAGHSMFFLDNIYVPPIKFRPPTKGDDKVSEHAQT 346

Query: 348 LLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSGICQ 169
           +LL ++L+SNI+LG AH+N ++ S ++ R MDLQ+S+N+LFD+KTA+ Q  KD  +GICQ
Sbjct: 347 VLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNLLFDNKTASGQ--KDLVTGICQ 404

Query: 168 YLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
            LEKKEGIFRQKMMGKRVN+ACRSVISPDPYL+VNEIGIPPYFALRLTYPERVTPW
Sbjct: 405 LLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPW 460


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
            lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
            ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score =  295 bits (755), Expect = 2e-77
 Identities = 160/295 (54%), Positives = 203/295 (68%), Gaps = 1/295 (0%)
 Frame = -3

Query: 882  CEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYSW 703
            C+ +NP++ KP FGW  +  +  ++I +N IR  +L          K +S V N  D+  
Sbjct: 216  CKAVNPQLEKPMFGWVRMKAMKGSDIVANVIRGLKLK---------KSTSSVENPDDF-- 264

Query: 702  KDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILRRL 523
             DDSG    ++     D  K+  +K  + +K      E+ NN     LLP++VR+IL+ L
Sbjct: 265  -DDSGI---DALSEVEDGDKETREKSTEVVK----EFEEHNNSSKRDLLPTEVREILKDL 316

Query: 522  WENE-PLCSYIYDIQQQQCKLSGKATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPHTL 346
            WENE   CS+I D+ Q       +   YSMFFLE++LVPPIKFRP  KGGDSVMEHP T+
Sbjct: 317  WENEHDFCSFIGDLWQS----GSEKIDYSMFFLESVLVPPIKFRPSTKGGDSVMEHPQTV 372

Query: 345  LLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSINVLFDSKTATSQAQKDGTSGICQY 166
             L K+L SNI LGNA  N  ++SKIISR M+LQ+S+NVLFDSKTAT Q+Q++G SGICQ 
Sbjct: 373  GLNKVLGSNIQLGNACTNKLDQSKIISRWMNLQESVNVLFDSKTATVQSQREG-SGICQL 431

Query: 165  LEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPW 1
            LEKKEG+FRQKMMGKRVN ACRSVISPDPY++VN+IGIPP FAL+LTYPERVTPW
Sbjct: 432  LEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPERVTPW 486


>gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  290 bits (743), Expect = 4e-76
 Identities = 150/197 (76%), Positives = 166/197 (84%), Gaps = 2/197 (1%)
 Frame = -3

Query: 585 QNNYFSGPLLPSQVRDILRRLWENE-PLCSYIYDIQQQQCKLSGKATGYSMFFLETILVP 409
           Q N FSGPLLPS+V+ I + LWENE  LCS I DIQQQ     GK  GYSMFFLETILVP
Sbjct: 3   QKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILVP 59

Query: 408 PIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRL-MDLQQSINV 232
           PIKFR P KGGDSVMEHP T+LL K+LQ+NI+LGNA+ NN + SK + RL MDLQQS+N+
Sbjct: 60  PIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNL 119

Query: 231 LFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGI 52
           LFDSKTA SQ  +D +SGICQ LEKKEG+FRQKMMGKRVNFACRSVISPDPYL+VNEIGI
Sbjct: 120 LFDSKTAMSQG-RDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGI 178

Query: 51  PPYFALRLTYPERVTPW 1
           PPYFALRLTYPERVTPW
Sbjct: 179 PPYFALRLTYPERVTPW 195