BLASTX nr result

ID: Rehmannia25_contig00030043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00030043
         (600 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV59372.1| GAGA-binding transcriptional activator [Triphysar...    89   2e-22
ref|XP_006347363.1| PREDICTED: protein BASIC PENTACYSTEINE2-like...    66   2e-20
ref|NP_001266122.1| GAGA-binding transcriptional activator [Sola...    64   5e-09

>gb|ADV59372.1| GAGA-binding transcriptional activator [Triphysaria pusilla]
          Length = 293

 Score = 89.4 bits (220), Expect(2) = 2e-22
 Identities = 43/70 (61%), Positives = 51/70 (72%), Gaps = 6/70 (8%)
 Frame = -2

Query: 431 VMFSTNGGPFHHHRVGGISESHIPMDYWMNQSREKYLNIC----YQPSYAISPE*SAHSI 264
           VM STNGGPFHHHRVGG+SE HIP+DYWMNQ+  KYLNI     YQ  Y  SPE S+  +
Sbjct: 54  VMASTNGGPFHHHRVGGVSEPHIPIDYWMNQNPGKYLNIISGNYYQLGYGTSPETSSSHL 113

Query: 263 --LPHPINLP 240
             LPH +++P
Sbjct: 114 LQLPHSVDIP 123



 Score = 42.4 bits (98), Expect(2) = 2e-22
 Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 17/50 (34%)
 Frame = -1

Query: 552 MDENRNLSLRN*GF-----------------QLMSSMAEKPLLGCGVRDH 454
           MDEN N++LRN GF                 QLMSSMAEKPL   GVRD+
Sbjct: 1   MDENGNMNLRNWGFLGTPTTAPIKSPAHLGLQLMSSMAEKPLFSAGVRDN 50


>ref|XP_006347363.1| PREDICTED: protein BASIC PENTACYSTEINE2-like isoform X1 [Solanum
           tuberosum]
          Length = 311

 Score = 66.2 bits (160), Expect(3) = 2e-20
 Identities = 37/72 (51%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
 Frame = -2

Query: 455 TTTPTQSAVMFSTNGGPFHHHRVGGISESHIPMDY----WMNQS--REKYLNIC-----Y 309
           T  P    VM STNGG FHHHRV G+SES +PM+Y    W+NQ   REKYLN+      Y
Sbjct: 54  THQPDHPTVMASTNGGAFHHHRVCGLSESPMPMEYMRDSWVNQKDYREKYLNVLSANHPY 113

Query: 308 QPSYAISPE*SA 273
            P Y   PE S+
Sbjct: 114 LPGYGFLPETSS 125



 Score = 50.4 bits (119), Expect(3) = 2e-20
 Identities = 28/78 (35%), Positives = 39/78 (50%)
 Frame = -3

Query: 238 IDETCEERDNXXXXXXXXXXXXXKTPNSXXXXXXXXXXXXXXXRDEHTTPPIHRARAPKK 59
           ++E C+ERDN             +   S                 + +TP + RARAP+K
Sbjct: 146 VEEVCQERDNIGGLAKKREAGQSQVLKSPKPKKAKKATRAPK---DESTPSLPRARAPRK 202

Query: 58  CAEIVINGINMDISEIPV 5
            AE++INGINMDIS IP+
Sbjct: 203 SAEVIINGINMDISVIPI 220



 Score = 28.5 bits (62), Expect(3) = 2e-20
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 516 GFQLMSSMAEKPLLGCGVRDHHH 448
           G QLMSSM EKP     + D+HH
Sbjct: 27  GLQLMSSMNEKPPHFRNIHDNHH 49


>ref|NP_001266122.1| GAGA-binding transcriptional activator [Solanum lycopersicum]
           gi|319718183|gb|ADV59393.1| GAGA-binding transcriptional
           activator [Solanum lycopersicum]
           gi|319718185|gb|ADV59394.1| GAGA-binding transcriptional
           activator [Solanum lycopersicum]
          Length = 311

 Score = 64.3 bits (155), Expect(2) = 5e-09
 Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 11/69 (15%)
 Frame = -2

Query: 446 PTQSAVMFSTNGGPFHHHRVGGISESHIPMDY----WMNQS--REKYLNIC-----YQPS 300
           P   +VM STNGG FHHHRV G+SES +PM+Y    W+NQ   REKYLN+      Y P 
Sbjct: 57  PDHPSVMASTNGGAFHHHRVCGLSESPMPMEYMRDSWVNQKDYREKYLNVLSANHPYLPG 116

Query: 299 YAISPE*SA 273
           +   PE S+
Sbjct: 117 FGFLPETSS 125



 Score = 22.3 bits (46), Expect(2) = 5e-09
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 516 GFQLMSSMAEKPLLGCGVRDHH 451
           G Q +SSM EKP     + D+H
Sbjct: 27  GLQFVSSMNEKPPHFRNIHDNH 48


Top