BLASTX nr result

ID: Rehmannia25_contig00029983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029983
         (424 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGZ16414.1| MYB15, partial [Scutellaria baicalensis]                67   2e-09
gb|EOY03898.1| Myb domain protein 20 [Theobroma cacao]                 62   6e-08
dbj|BAF80451.1| MYB-related transcription factor [Nicotiana taba...    56   4e-06

>gb|AGZ16414.1| MYB15, partial [Scutellaria baicalensis]
          Length = 258

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
 Frame = -2

Query: 408 TFD---LVNNDFCIDEIPVIEPHEILLPNYCDNENXXXXXXXXXXXXXXXXXTNMIEEVL 238
           TFD   LVNNDF IDEIPV+EPHEILL   CD+ +                  NM++E+ 
Sbjct: 182 TFDPMELVNNDFRIDEIPVMEPHEILLS--CDDTS---SSSSSSSSSSSSTSRNMLDEL- 235

Query: 237 QFSPNLEDYYSEIMINDIWYDD 172
            FSP+ +DYYS+ MIN IW +D
Sbjct: 236 -FSPSFDDYYSDFMINSIWSED 256


>gb|EOY03898.1| Myb domain protein 20 [Theobroma cacao]
          Length = 308

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
 Frame = -2

Query: 408 TFDLVNNDFCIDEIPVIEPHEILLPNYCDNENXXXXXXXXXXXXXXXXXTNMIEEVLQFS 229
           T +++NN FC DE+P+IEPHEIL+P    + +                 ++   E LQF 
Sbjct: 188 TMEMMNNGFCTDEVPLIEPHEILVPACAPSTS---------SSSSSSSDSSKFLEELQF- 237

Query: 228 PNLE---DYYSEIMIND-----IWYDDFNGLDLLINDESDQVGNNVITSFEQPMVQYPVM 73
           P+ E   DY +    N+     +W DD +  DLLIND+SD      + S   P++Q P M
Sbjct: 238 PDFEWPSDYNTGSNNNNNNSMSLWDDDLSSWDLLINDDSD-TSKLALDSSSSPLIQCPRM 296

Query: 72  VTDDES 55
             D +S
Sbjct: 297 AFDQDS 302


>dbj|BAF80451.1| MYB-related transcription factor [Nicotiana tabacum]
          Length = 302

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = -2

Query: 408 TFDLVNNDFCIDEIPVIEPHEILLPNYCDNENXXXXXXXXXXXXXXXXXTNMIEEVLQFS 229
           T ++ NN FC DE+P+IEPHEIL+P+                       ++ I E L+F 
Sbjct: 203 TVEVNNNGFCTDEVPLIEPHEILVPS---------KSTPSTSSSSSSSSSSYIIEELKFL 253

Query: 228 PNLEDYYSEIMINDIWYDDFNG-LDLLINDESDQVGNNV 115
           P+ +D+  E  +   W +DF+  LD L+ND++D   NNV
Sbjct: 254 PSFDDWPMENNMGFGWENDFSSTLDFLLNDDNDM--NNV 290


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