BLASTX nr result

ID: Rehmannia25_contig00029975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029975
         (395 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242582.1| PREDICTED: RNA polymerase II C-terminal doma...    59   7e-07
ref|XP_006343662.1| PREDICTED: RNA polymerase II C-terminal doma...    56   4e-06

>ref|XP_004242582.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Solanum lycopersicum]
          Length = 512

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +1

Query: 238 RVKRRKLELPDGVINPESSSSQGEPKEDLGESSPKKNTCPHPGVYAGMCMRC 393
           R K+RK+EL +G ++P+SS S+GEP E  G +S   + C HPGV  GMC+RC
Sbjct: 113 RSKKRKIELIEGAVDPQSSVSRGEPAETSG-ASMALDVCTHPGVMGGMCIRC 163


>ref|XP_006343662.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Solanum tuberosum]
          Length = 478

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +1

Query: 238 RVKRRKLELPDGVINPESSSSQGEPKEDLGESSPKKNTCPHPGVYAGMCMRC 393
           R K+RK+EL +  ++P+SS S+GEP E  G +S   + C HPGV  GMC+RC
Sbjct: 79  RSKKRKIELIEAAVDPQSSVSRGEPAETSG-ASLALDVCTHPGVMGGMCIRC 129


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