BLASTX nr result
ID: Rehmannia25_contig00029888
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia25_contig00029888 (310 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 59 9e-07 gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 59 9e-07 pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 58 1e-06 gb|EMJ16028.1| hypothetical protein PRUPE_ppa024018mg, partial [... 56 6e-06 gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 49 6e-06 gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 10003... 55 7e-06 >ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis] Length = 2303 Score = 58.5 bits (140), Expect = 9e-07 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = -3 Query: 308 FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRAIRFW--KLSPIQW 135 F+W+ +N LPT + L K+ C DPICQ C E ET+ H +C A + W S +Q Sbjct: 1031 FMWRAARNLLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCKAARKIWYHATSSVQI 1090 Query: 134 SN 129 SN Sbjct: 1091 SN 1092 >gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1138 Score = 58.5 bits (140), Expect = 9e-07 Identities = 22/56 (39%), Positives = 35/56 (62%) Frame = -3 Query: 308 FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRAIRFWKLSPI 141 FLW+ LP DQ++++ +DP CQ+CG+E E+ H+ F C+ A + W LS + Sbjct: 834 FLWRILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGV 889 >pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1| reverse transcriptase [Arabidopsis thaliana] Length = 1333 Score = 58.2 bits (139), Expect = 1e-06 Identities = 23/59 (38%), Positives = 37/59 (62%) Frame = -3 Query: 308 FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRAIRFWKLSPIQWS 132 FLW+ + LP Q++++ +DP CQ+CGEE E++ H+ F C+ A + W LS + S Sbjct: 1060 FLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGVPTS 1118 >gb|EMJ16028.1| hypothetical protein PRUPE_ppa024018mg, partial [Prunus persica] Length = 213 Score = 55.8 bits (133), Expect = 6e-06 Identities = 24/57 (42%), Positives = 32/57 (56%) Frame = -3 Query: 308 FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRAIRFWKLSPIQ 138 FLW+CC+N L + L + V+ C G+E ET H+FF C A FW SP+Q Sbjct: 153 FLWRCCRNILAVRGNLRSRRIDVENGCPFYGQEEETQVHIFFRCQIAKPFWFASPLQ 209 >gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1225 Score = 49.3 bits (116), Expect(2) = 6e-06 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = -3 Query: 308 FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRAIRFWKLSPI 141 F W+C L T +L + + +C CG E E++ HL F C + + W LSPI Sbjct: 938 FEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPI 993 Score = 26.2 bits (56), Expect(2) = 6e-06 Identities = 7/19 (36%), Positives = 16/19 (84%) Frame = -1 Query: 58 SEDRIQLSTYLLWWLWKTR 2 +ED +++ ++LW++WK+R Sbjct: 1022 AEDIMEIFPWILWYIWKSR 1040 >gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 100033-105622 [Arabidopsis thaliana] Length = 1557 Score = 55.5 bits (132), Expect = 7e-06 Identities = 21/47 (44%), Positives = 32/47 (68%) Frame = -3 Query: 308 FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRA 168 FLW+ LP DQ+L++ +VDP CQ+CG+E E++ H+ F C+ A Sbjct: 1332 FLWRILSAALPVADQILRRGMNVDPCCQICGQEGESINHVLFTCSVA 1378