BLASTX nr result

ID: Rehmannia25_contig00029888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029888
         (310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...    59   9e-07
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    59   9e-07
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    58   1e-06
gb|EMJ16028.1| hypothetical protein PRUPE_ppa024018mg, partial [...    56   6e-06
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    49   6e-06
gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 10003...    55   7e-06

>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = -3

Query: 308  FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRAIRFW--KLSPIQW 135
            F+W+  +N LPT + L K+ C  DPICQ C  E ET+ H   +C  A + W    S +Q 
Sbjct: 1031 FMWRAARNLLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCKAARKIWYHATSSVQI 1090

Query: 134  SN 129
            SN
Sbjct: 1091 SN 1092


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1138

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 22/56 (39%), Positives = 35/56 (62%)
 Frame = -3

Query: 308  FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRAIRFWKLSPI 141
            FLW+     LP  DQ++++   +DP CQ+CG+E E+  H+ F C+ A + W LS +
Sbjct: 834  FLWRILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGV 889


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 23/59 (38%), Positives = 37/59 (62%)
 Frame = -3

Query: 308  FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRAIRFWKLSPIQWS 132
            FLW+   + LP   Q++++   +DP CQ+CGEE E++ H+ F C+ A + W LS +  S
Sbjct: 1060 FLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGVPTS 1118


>gb|EMJ16028.1| hypothetical protein PRUPE_ppa024018mg, partial [Prunus persica]
          Length = 213

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/57 (42%), Positives = 32/57 (56%)
 Frame = -3

Query: 308 FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRAIRFWKLSPIQ 138
           FLW+CC+N L  +  L  +   V+  C   G+E ET  H+FF C  A  FW  SP+Q
Sbjct: 153 FLWRCCRNILAVRGNLRSRRIDVENGCPFYGQEEETQVHIFFRCQIAKPFWFASPLQ 209


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 49.3 bits (116), Expect(2) = 6e-06
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = -3

Query: 308  FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRAIRFWKLSPI 141
            F W+C    L T  +L  +    + +C  CG E E++ HL F C  + + W LSPI
Sbjct: 938  FEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPI 993



 Score = 26.2 bits (56), Expect(2) = 6e-06
 Identities = 7/19 (36%), Positives = 16/19 (84%)
 Frame = -1

Query: 58   SEDRIQLSTYLLWWLWKTR 2
            +ED +++  ++LW++WK+R
Sbjct: 1022 AEDIMEIFPWILWYIWKSR 1040


>gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 100033-105622 [Arabidopsis thaliana]
          Length = 1557

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 21/47 (44%), Positives = 32/47 (68%)
 Frame = -3

Query: 308  FLWKCCQNFLPTKDQLLKKDCHVDPICQMCGEEAETLPHLFFNCTRA 168
            FLW+     LP  DQ+L++  +VDP CQ+CG+E E++ H+ F C+ A
Sbjct: 1332 FLWRILSAALPVADQILRRGMNVDPCCQICGQEGESINHVLFTCSVA 1378


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