BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029823
         (628 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239474.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
ref|XP_003621292.1| Pentatricopeptide repeat-containing protein ...    67   5e-09
emb|CBI34116.3| unnamed protein product [Vitis vinifera]               65   2e-08
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi...    65   2e-08
gb|EOX92409.1| Pentatricopeptide repeat-containing protein, puta...    64   3e-08
gb|EOX92408.1| Pentatricopeptide repeat-containing protein, puta...    64   3e-08
gb|EOX92407.1| Pentatricopeptide repeat-containing protein, puta...    64   3e-08
ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
ref|XP_003602250.1| Pentatricopeptide repeat-containing protein ...    64   4e-08
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,...    63   8e-08
gb|EPS64373.1| hypothetical protein M569_10413, partial [Genlise...    60   5e-07
ref|XP_004491840.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...    59   1e-06
ref|XP_004295544.1| PREDICTED: pentatricopeptide repeat-containi...    56   1e-05

>ref|XP_004239474.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Solanum lycopersicum]
          Length = 644

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 34/63 (53%), Positives = 44/63 (69%)
 Frame = -2

Query: 213 NFCIDFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSEL 34
           N  + FF QLKE GF+HDIQ+Y+A+I+  C WG+D KLDSLF  +IN  K    FEVS+L
Sbjct: 79  NDALSFFRQLKESGFKHDIQTYMAMIRTFCYWGMDMKLDSLFLEVINLGKKGLGFEVSDL 138

Query: 33  LRQ 25
             +
Sbjct: 139 FEE 141


>ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 829

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 34/63 (53%), Positives = 44/63 (69%)
 Frame = -2

Query: 213 NFCIDFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSEL 34
           N  + FF QLKE GF+HDIQ+Y+A+I+  C WG+D KLDSLF  +IN  K    FEVS+L
Sbjct: 79  NDALSFFRQLKESGFKHDIQTYMAMIRTFCYWGMDMKLDSLFLEVINLGKRGLGFEVSDL 138

Query: 33  LRQ 25
             +
Sbjct: 139 FEE 141


>ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355496307|gb|AES77510.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 738

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -2

Query: 228 YAKGTNFCIDFFNQLKEK-GFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRC 52
           Y    +    +F QLK + GF H+IQ+Y +II+ILC + LDRKLDSLF  II+  K   C
Sbjct: 71  YQNNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPC 130

Query: 51  FEVSEL 34
           FE++ L
Sbjct: 131 FEINVL 136


>emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 28/60 (46%), Positives = 40/60 (66%)
 Frame = -2

Query: 213 NFCIDFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSEL 34
           N    FF QLKE GFQH++ +Y A+I++LC W L+RKL SL   I+ SK+    F+++ L
Sbjct: 78  NLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITAL 137


>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 28/60 (46%), Positives = 40/60 (66%)
 Frame = -2

Query: 213 NFCIDFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSEL 34
           N    FF QLKE GFQH++ +Y A+I++LC W L+RKL SL   I+ SK+    F+++ L
Sbjct: 78  NLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITAL 137


>gb|EOX92409.1| Pentatricopeptide repeat-containing protein, putative isoform 3
           [Theobroma cacao]
          Length = 784

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 32/63 (50%), Positives = 41/63 (65%)
 Frame = -2

Query: 222 KGTNFCIDFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEV 43
           K  N  + FFNQL E GF HD+ +Y AI++ILC WG DRKLDS+   II  +K    FE+
Sbjct: 48  KQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDRKLDSVLLEIIRKEK-RLGFEI 106

Query: 42  SEL 34
            +L
Sbjct: 107 MDL 109


>gb|EOX92408.1| Pentatricopeptide repeat-containing protein, putative isoform 2
           [Theobroma cacao]
          Length = 818

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 32/63 (50%), Positives = 41/63 (65%)
 Frame = -2

Query: 222 KGTNFCIDFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEV 43
           K  N  + FFNQL E GF HD+ +Y AI++ILC WG DRKLDS+   II  +K    FE+
Sbjct: 74  KQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDRKLDSVLLEIIRKEK-RLGFEI 132

Query: 42  SEL 34
            +L
Sbjct: 133 MDL 135


>gb|EOX92407.1| Pentatricopeptide repeat-containing protein, putative isoform 1
           [Theobroma cacao]
          Length = 792

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 32/63 (50%), Positives = 41/63 (65%)
 Frame = -2

Query: 222 KGTNFCIDFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEV 43
           K  N  + FFNQL E GF HD+ +Y AI++ILC WG DRKLDS+   II  +K    FE+
Sbjct: 48  KQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDRKLDSVLLEIIRKEK-RLGFEI 106

Query: 42  SEL 34
            +L
Sbjct: 107 MDL 109


>ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Cucumis sativus]
          Length = 795

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 30/56 (53%), Positives = 43/56 (76%)
 Frame = -2

Query: 198 FFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSELL 31
           FF +L+E+GFQH+I +Y A+I+ILC WGL RKL++LF  +I SKK    F+V +L+
Sbjct: 79  FFCELEERGFQHNISTYAALIRILCSWGLGRKLETLFLNLIGSKKVE--FDVLDLI 132


>ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Cucumis sativus]
          Length = 920

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 30/56 (53%), Positives = 43/56 (76%)
 Frame = -2

Query: 198 FFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSELL 31
           FF +L+E+GFQH+I +Y A+I+ILC WGL RKL++LF  +I SKK    F+V +L+
Sbjct: 79  FFCELEERGFQHNISTYAALIRILCSWGLGRKLETLFLNLIGSKKVE--FDVLDLI 132


>ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491298|gb|AES72501.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 946

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
 Frame = -2

Query: 228 YAKGTNFCIDFFNQLKEK-GFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINS-KKDHR 55
           Y    +  +  F++LK + GF H+IQ+YVAII+ILC W L+R+LDSLF+ II S  K + 
Sbjct: 73  YRNNPSLALSHFSELKNQHGFSHNIQTYVAIIRILCYWNLNRRLDSLFRDIIISHSKQNP 132

Query: 54  CFEVSELLRQ 25
            FE+ +L  +
Sbjct: 133 LFEIHDLFEK 142


>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 913

 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
 Frame = -2

Query: 204 IDFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGII--NSKKDHRCFEVSELL 31
           + FFNQLK+ GF+HDI +Y AII+ILC WGL ++L S+F  II  +   +   FE+S  L
Sbjct: 84  LSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLDIIYVSCNDNDTPFEISHFL 143


>gb|EPS64373.1| hypothetical protein M569_10413, partial [Genlisea aurea]
          Length = 124

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = -2

Query: 198 FFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSELL 31
           FF  LK++GFQHD+Q Y+AII+IL    L  KLDSLF  I++ K +   FE+SELL
Sbjct: 23  FFYSLKDRGFQHDVQCYLAIIEILSRRRLITKLDSLFIEILDVKNNDLSFEISELL 78


>ref|XP_004491840.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X1 [Cicer arietinum]
           gi|502101204|ref|XP_004491841.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X2 [Cicer arietinum]
           gi|502101208|ref|XP_004491842.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X3 [Cicer arietinum]
           gi|502101212|ref|XP_004491843.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X4 [Cicer arietinum]
           gi|502101216|ref|XP_004491844.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X5 [Cicer arietinum]
           gi|502101220|ref|XP_004491845.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X6 [Cicer arietinum]
           gi|502101225|ref|XP_004491846.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X7 [Cicer arietinum]
          Length = 694

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 26/57 (45%), Positives = 38/57 (66%)
 Frame = -2

Query: 204 IDFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSEL 34
           + +F QL ++GF ++I +Y AII+I+C WG  RKLDSLF  +I   K    F++ EL
Sbjct: 81  LSYFTQLNQQGFSYNISTYAAIIRIMCYWGWLRKLDSLFLDVIAHSKQDPSFKIHEL 137


>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = -2

Query: 213 NFCIDFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKD 61
           +    +FNQLKE G+ HD  +Y AI++ILC WG  RKLDS+   II  KKD
Sbjct: 74  SLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEII--KKD 122


>ref|XP_004295544.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 515

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -2

Query: 195 FNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKD 61
           F +LKE GF+H++ +Y A+++ILC W LDRKLDSLF  +I    D
Sbjct: 114 FCKLKEDGFRHNVLTYCALVRILCYWRLDRKLDSLFLELIKGSGD 158