BLASTX nr result

ID: Rehmannia25_contig00029762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029762
         (572 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343609.1| PREDICTED: uncharacterized protein LOC102602...    83   6e-14
ref|XP_004250421.1| PREDICTED: uncharacterized protein LOC101253...    74   3e-11
ref|XP_006350346.1| PREDICTED: uncharacterized protein LOC102578...    67   3e-09
gb|EOY31493.1| DNA double-strand break repair rad50 ATPase, puta...    67   3e-09

>ref|XP_006343609.1| PREDICTED: uncharacterized protein LOC102602908 [Solanum tuberosum]
          Length = 453

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 59/131 (45%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
 Frame = +3

Query: 24  EAVEEKLYARNEPDWLKKVLKLTHHEKQLCGPSGIASIDCHLAVVEPTTRISESRPELYQ 203
           EAV+  +  R+E D LKK       E +L   S  A+I CHLA+  PTT ISE   E +Q
Sbjct: 326 EAVKSSV--RDEADVLKKYFVSAQQENKLRRASEAAAITCHLAISRPTTSISEI-SESHQ 382

Query: 204 LNRTSEIVEVERPAEC--TSRXXXXXXXXXXXXQINSLHEEIRGLKVKK-SLKRDEPSLC 374
            NRTSEIVEV R A     +R            Q+N +H EI+ LK  K     DEPSL 
Sbjct: 383 PNRTSEIVEVGREASRYEMAREEELKLLHDIKEQLNLMHSEIQSLKSDKLPPSDDEPSLL 442

Query: 375 ALSEAMLYFWL 407
            LSEAM++FWL
Sbjct: 443 LLSEAMVHFWL 453


>ref|XP_004250421.1| PREDICTED: uncharacterized protein LOC101253960 [Solanum
           lycopersicum]
          Length = 202

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 54/133 (40%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
 Frame = +3

Query: 21  PEAVEE---KLYARNEPDWLKKVLKLTHHEKQLCGPSGIASIDCHLAVVEPTTRISESRP 191
           P++V++   K   ++E + LKK       EK+L   S  ASI CHLA+  PTT IS +  
Sbjct: 71  PDSVQQEAVKSSVKDEAELLKKYFVAAQREKKLRRASEAASISCHLAISRPTTSISGTN- 129

Query: 192 ELYQLNRTSEIVEVERPA-ECTSRXXXXXXXXXXXXQINSLHEEIRGLKVKKSLKRDEPS 368
           EL+  NRTSEI EV R A                  Q+N +H EI+ LK  K    DE S
Sbjct: 130 ELHLHNRTSEIGEVGREATRQEMAREELKLLHEIKEQLNLMHSEIQRLKTDKLPPIDESS 189

Query: 369 LCALSEAMLYFWL 407
           L  LSEAM++F L
Sbjct: 190 LLPLSEAMIHFSL 202


>ref|XP_006350346.1| PREDICTED: uncharacterized protein LOC102578440 [Solanum tuberosum]
          Length = 445

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 49/122 (40%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
 Frame = +3

Query: 24  EAVEEKLYARNEPDWLKKVLKLTHHEKQLCGPSGIASIDCHLAVVEPTTRISESRPELYQ 203
           + V  K   ++E + LKK       EK+L   S  ASI CHLA+  PT  IS +  EL+ 
Sbjct: 321 QQVAVKSSVKDEAELLKKYFVSAQREKKLRRASEAASIACHLAISRPTISISGTN-ELHL 379

Query: 204 LNRTSEIVEVERPA-ECTSRXXXXXXXXXXXXQINSLHEEIRGLKVKKSLKRDEPSLCAL 380
            NRTSEI EV R A                  Q+N +H EI+ LK  K    DEPSL  L
Sbjct: 380 HNRTSEIGEVGREATRQEMAQEELKLLHEIKEQLNLMHSEIQSLKTDKLPSSDEPSLLPL 439

Query: 381 SE 386
           SE
Sbjct: 440 SE 441


>gb|EOY31493.1| DNA double-strand break repair rad50 ATPase, putative isoform 1
           [Theobroma cacao] gi|508784238|gb|EOY31494.1| DNA
           double-strand break repair rad50 ATPase, putative
           isoform 1 [Theobroma cacao]
          Length = 511

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
 Frame = +3

Query: 72  KKVLKLTHHEKQLCGPSGIASIDCHLAVVEPTTRISESRPELYQLNRTSEIVEVERPAE- 248
           K  L   +HEK+LC   G  + DC  A++ P T +++ R EL QL +  E +E  R    
Sbjct: 396 KNNLPSANHEKKLCKLRGQTNADCKSALLHPATGVNDYRSELQQLTQRVEQLESGRNNTR 455

Query: 249 ---CTSRXXXXXXXXXXXXQINSLHEEIRGLKVKKSLKRDEPSLCALSEAMLYFWL 407
                 R            Q+NS+  E+R  + KKS   DE +L +L EAML+FWL
Sbjct: 456 HEISEGRGEELNLLRELREQLNSIQSEMRNWRPKKSTPSDEVTLLSLKEAMLHFWL 511


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