BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029666
         (653 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344540.1| PREDICTED: pentatricopeptide repeat-containi...   175   1e-41
ref|XP_004242906.1| PREDICTED: pentatricopeptide repeat-containi...   168   1e-39
ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi...   147   4e-33
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]   145   8e-33
ref|XP_002533731.1| pentatricopeptide repeat-containing protein,...   142   1e-31
ref|XP_004296451.1| PREDICTED: pentatricopeptide repeat-containi...   135   1e-29
ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|5...   133   5e-29
gb|EMJ16134.1| hypothetical protein PRUPE_ppa001374mg [Prunus pe...   132   7e-29
gb|EOY31850.1| Tetratricopeptide repeat (TPR)-like superfamily p...   131   2e-28
ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containi...   128   1e-27
ref|XP_006409097.1| hypothetical protein EUTSA_v10022551mg [Eutr...   127   3e-27
ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containi...   127   3e-27
ref|NP_179484.1| pentatricopeptide repeat-containing protein [Ar...   126   5e-27
gb|ESW10803.1| hypothetical protein PHAVU_009G239200g [Phaseolus...   123   4e-26
ref|XP_006453335.1| hypothetical protein CICLE_v10007460mg [Citr...   119   8e-25
ref|XP_002884184.1| pentatricopeptide repeat-containing protein ...   118   1e-24
ref|XP_006296987.1| hypothetical protein CARUB_v10012981mg [Caps...   114   3e-23
gb|EXC05166.1| hypothetical protein L484_003973 [Morus notabilis]     112   1e-22
ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containi...   112   1e-22
ref|XP_003594946.1| Pentatricopeptide repeat-containing protein ...   109   6e-22

>ref|XP_006344540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic-like [Solanum tuberosum]
          Length = 842

 Score =  175 bits (443), Expect = 1e-41
 Identities = 104/207 (50%), Positives = 126/207 (60%), Gaps = 8/207 (3%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHS----FPL 432
           MEG+LFPNRP  P+Q TKP   P  QRLK                     S S    FPL
Sbjct: 1   MEGSLFPNRPILPIQSTKPTPLPPTQRLKLNPTTTSSPLPPLKQQQQQTPSSSTSTSFPL 60

Query: 431 DSLLQHLLHISSPVKSSLTSSHVIPSHDQDSLSAHFRKDD----KSSIPIPRIGVDDEGL 264
           DSLLQHLLH+SS        S  I +    SL      DD     + + +P++   D+G 
Sbjct: 61  DSLLQHLLHVSSSNPPRTVKSSRISNTHLSSLPVSLENDDTLFGNTRVTVPKMESFDDGS 120

Query: 263 LDFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLF 84
           L+FLP  CKLL++SILE+P+S L  FFDS KFELL EVDL SLLKGLDV G  ++AILLF
Sbjct: 121 LEFLPLNCKLLIDSILERPLSHLTEFFDSVKFELL-EVDLMSLLKGLDVIGKWDRAILLF 179

Query: 83  EWVVLNLDVSNSDKLDNQIIELMVKIL 3
           EWVVLN+ V N +KLD+Q+IE MVK+L
Sbjct: 180 EWVVLNIHVEN-EKLDSQVIEFMVKVL 205


>ref|XP_004242906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Solanum lycopersicum]
          Length = 842

 Score =  168 bits (426), Expect = 1e-39
 Identities = 99/207 (47%), Positives = 124/207 (59%), Gaps = 8/207 (3%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHS----FPL 432
           MEG+LFPNRP  P+Q TKP   P  QRLK                     S S    FPL
Sbjct: 1   MEGSLFPNRPILPIQSTKPTPLPPTQRLKLNPTTTTSPLPPLKQQQQQTPSSSTSTSFPL 60

Query: 431 DSLLQHLLHISSPVKSSLTSSHVIPSHDQDSLSAHFRKDD----KSSIPIPRIGVDDEGL 264
           DSLLQHLLH+SS        S  I +    +L      DD     + + +P++   D+G 
Sbjct: 61  DSLLQHLLHVSSSNPPRTVKSSRISNTHLSTLPVSLENDDTLFGNTRVTVPKMESFDDGS 120

Query: 263 LDFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLF 84
           L+FLP  CKL+++SILE+P+S +  FFDS K ELL EVDL SLLKGLDV G  ++AILLF
Sbjct: 121 LEFLPLNCKLMIDSILERPLSHMTEFFDSVKLELL-EVDLMSLLKGLDVLGKWDRAILLF 179

Query: 83  EWVVLNLDVSNSDKLDNQIIELMVKIL 3
           EW VLN+ V N +KLD+Q+IE MVK+L
Sbjct: 180 EWAVLNIHVEN-EKLDSQVIEFMVKVL 205


>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
           protein product [Vitis vinifera]
          Length = 821

 Score =  147 bits (370), Expect = 4e-33
 Identities = 91/199 (45%), Positives = 120/199 (60%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           MEGTLFPNRP+FP+  TK ++ PNH  +KF                      S PLDSLL
Sbjct: 1   MEGTLFPNRPSFPIPRTK-STQPNHPHVKFNPATLPLPPQSPSPP-------SLPLDSLL 52

Query: 419 QHLLHISSPVKSSLTSSHVIPSHDQDSLSAHFRKDDKSSIPIPRIGVDDEGLLDFLPFKC 240
           QHLLH SSP       +   P  +    SA      + S+   +     +G ++FL  K 
Sbjct: 53  QHLLHFSSPTHKPKPINP--PKTNLKKFSAVSVSQLEGSVEEAQ---SPDGSVEFLSRKG 107

Query: 239 KLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLFEWVVLNLD 60
           K LLNSI+E P+  L  FFDS KFELL +VDL SLLKGLD+SG+ ++A+LLF+W +LNL 
Sbjct: 108 KFLLNSIVEHPLPGLNDFFDSVKFELL-DVDLVSLLKGLDLSGNWKRAVLLFKWAILNL- 165

Query: 59  VSNSDKLDNQIIELMVKIL 3
            S ++K+DNQ++ELMV+IL
Sbjct: 166 YSRNEKIDNQLVELMVRIL 184


>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  145 bits (367), Expect = 8e-33
 Identities = 91/199 (45%), Positives = 119/199 (59%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           MEGTLFPNRP+FP+  TK  + PNH  +KF                      S PLDSLL
Sbjct: 1   MEGTLFPNRPSFPIPRTKX-TXPNHPHVKFNPATLPLPPQSPSPP-------SLPLDSLL 52

Query: 419 QHLLHISSPVKSSLTSSHVIPSHDQDSLSAHFRKDDKSSIPIPRIGVDDEGLLDFLPFKC 240
           QHLLH SSP       +   P  +    SA      + S+   +     +G ++FL  K 
Sbjct: 53  QHLLHFSSPTHKPKPINP--PKTNLKKFSAVSVSQLEGSVEEAQ---SPDGSVEFLSRKG 107

Query: 239 KLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLFEWVVLNLD 60
           K LLNSI+E P+  L  FFDS KFELL +VDL SLLKGLD+SG+ ++A+LLF+W +LNL 
Sbjct: 108 KFLLNSIVEHPLPGLNDFFDSVKFELL-DVDLVSLLKGLDLSGNWKRAVLLFKWAILNL- 165

Query: 59  VSNSDKLDNQIIELMVKIL 3
            S ++K+DNQ++ELMV+IL
Sbjct: 166 YSRNEKIDNQLVELMVRIL 184


>ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526356|gb|EEF28650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  142 bits (357), Expect = 1e-31
 Identities = 95/210 (45%), Positives = 119/210 (56%), Gaps = 11/210 (5%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           MEGTLFPN+P +P+ PTK    PN   LKF                          DSLL
Sbjct: 1   MEGTLFPNKPVYPI-PTKRPQQPNPP-LKFSSAKLPPSPPPPPSSPQLPSR----FDSLL 54

Query: 419 QHLLHISSP----------VKSSLTSSHVIPS-HDQDSLSAHFRKDDKSSIPIPRIGVDD 273
           QHLLH+SSP          +   LT   + P+ H + +    F  D +         V D
Sbjct: 55  QHLLHLSSPPSNTRLPSLQISGDLTKKQLQPAPHRKPNSFLEFEVDKEEDKD-----VSD 109

Query: 272 EGLLDFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAI 93
            G L++L  K KL+L SI+EQP+ SL SFFDS+K+ELLQ VDL SLLK LD SG+ EKA+
Sbjct: 110 SGFLEYLSRKGKLILGSIIEQPLHSLASFFDSSKYELLQ-VDLISLLKALDYSGNWEKAL 168

Query: 92  LLFEWVVLNLDVSNSDKLDNQIIELMVKIL 3
           LLFEW VLNL ++N +K+D   IELMV+IL
Sbjct: 169 LLFEWSVLNLGIAN-EKIDRHAIELMVRIL 197


>ref|XP_004296451.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Fragaria vesca subsp. vesca]
          Length = 846

 Score =  135 bits (339), Expect = 1e-29
 Identities = 89/213 (41%), Positives = 119/213 (55%), Gaps = 14/213 (6%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           MEGTLFP+RP  P+Q  +P        +KF                      SFP+DSLL
Sbjct: 1   MEGTLFPSRPVLPIQTNRPIQPS--PPVKFNATTLPPLPQNPS---------SFPIDSLL 49

Query: 419 QHLLHISSPVKSSLTSSHVIPSHDQDSL--SAHFRKDDK---------SSIPIPRI---G 282
            HLL+ISSP  +      + P H  +    S H   D           +S+ +P      
Sbjct: 50  HHLLNISSPPNTPHNLKPLNPPHQTNDTFPSLHISADSTPKQHQFKKPTSVLVPSFEDKA 109

Query: 281 VDDEGLLDFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSE 102
             ++GL+DFL  K K++ NSI+E P+  +    DSAKFELL EVDL SLLK LD+SG+ E
Sbjct: 110 RTEDGLIDFLTIKGKMMFNSIVESPLDCVNELCDSAKFELL-EVDLISLLKALDLSGNWE 168

Query: 101 KAILLFEWVVLNLDVSNSDKLDNQIIELMVKIL 3
           +A+L+FEW++LNL+ + S KLD QIIELMV+IL
Sbjct: 169 RALLVFEWILLNLN-AESLKLDKQIIELMVRIL 200


>ref|XP_002329666.1| predicted protein [Populus trichocarpa]
           gi|566176851|ref|XP_006381785.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
           gi|550336541|gb|ERP59582.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 821

 Score =  133 bits (334), Expect = 5e-29
 Identities = 89/205 (43%), Positives = 114/205 (55%), Gaps = 6/205 (2%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           ME +LF N+P +P+   +P   PN+  LKF                      +F  DSLL
Sbjct: 1   MESSLFANKPVYPIPINRPPPLPNNPPLKFSSATLPPPPSPQS---------TFHFDSLL 51

Query: 419 QHLLHISSPVKSSLTSSHVIPSHDQDSLSAHFRKDDKSSIPIPRIGVD-DEGL-----LD 258
           QHLLH+SSP    L  +   PS          +  + SSI +    V+ +EGL     L+
Sbjct: 52  QHLLHLSSPPNHKLNKTQ-FPS---------LQISNDSSISVLEFEVEKEEGLSENESLE 101

Query: 257 FLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLFEW 78
           FL  + KLLLNSI EQP+  L  FF+S KFEL Q VDL  +LK LD+SG  E+AILLFEW
Sbjct: 102 FLSKRGKLLLNSIKEQPLGGLNDFFESCKFELFQ-VDLIGVLKALDLSGDCERAILLFEW 160

Query: 77  VVLNLDVSNSDKLDNQIIELMVKIL 3
           +VLNL   N + LDNQ +ELM +IL
Sbjct: 161 LVLNLGTGNVN-LDNQAVELMARIL 184


>gb|EMJ16134.1| hypothetical protein PRUPE_ppa001374mg [Prunus persica]
          Length = 842

 Score =  132 bits (333), Expect = 7e-29
 Identities = 91/217 (41%), Positives = 120/217 (55%), Gaps = 18/217 (8%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           MEGT FP+RPA+P+ PT     P+   +KF                       FP+DSLL
Sbjct: 1   MEGTFFPSRPAYPL-PTNRPIQPSPP-VKFNSTTLPPPPQTPSPP--------FPIDSLL 50

Query: 419 QHLLHISSPVKSSLTSSHVIPSHDQD------------SLSAHFRKDDKSSIPIPRIGVD 276
           QHLL +SSP  +      + P    +            +   H +    +SI +P    D
Sbjct: 51  QHLLSLSSPPNTPPKLKPLNPPQQTNGNFPSLQISVDSTPKQHHQLKKAASILVPNFEDD 110

Query: 275 ------DEGLLDFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVS 114
                 ++GLLDFL  K KL+ +SI+EQP+ SL  FFDSAKFEL  EVDL SLLK LD+S
Sbjct: 111 KVEVKPEDGLLDFLTIKGKLMFSSIVEQPLHSLNDFFDSAKFELF-EVDLISLLKALDLS 169

Query: 113 GSSEKAILLFEWVVLNLDVSNSDKLDNQIIELMVKIL 3
           G+ E+A+LLFEW++ NL   N  KL+N +IELMV+IL
Sbjct: 170 GNWERALLLFEWILSNLSSENL-KLNNPMIELMVRIL 205


>gb|EOY31850.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 845

 Score =  131 bits (329), Expect = 2e-28
 Identities = 91/219 (41%), Positives = 122/219 (55%), Gaps = 20/219 (9%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           MEGT+FPN+P +PV PTK  +  N + L+F                      S PLDSLL
Sbjct: 1   MEGTIFPNKPVYPV-PTKRQTQSN-KPLQFSSSTLPLPPQSQSPP-------SLPLDSLL 51

Query: 419 QHLLHISSPVKSSLTSSHVIPSHDQDSL--SAHFRKDD----------KSSIPIPRIGVD 276
           QHLLH+SSP  +      + P    +S   S H   D           K       +  D
Sbjct: 52  QHLLHLSSPPNTIHKPKTINPPKTNNSHYPSLHISSDSTQKLQQQVHPKKPTSASLLQFD 111

Query: 275 D--------EGLLDFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLD 120
           +        +G L+FL  K  L+LNSI EQP++SL  FF+S KFELLQ  D+FSLLK LD
Sbjct: 112 NSKEESQSRDGSLEFLSRKGMLMLNSIKEQPLNSLNDFFNSVKFELLQ-FDMFSLLKALD 170

Query: 119 VSGSSEKAILLFEWVVLNLDVSNSDKLDNQIIELMVKIL 3
           +SG  E+A+LLF+WVV ++  S++ KLDNQ++ELMV++L
Sbjct: 171 LSGDWERALLLFQWVVSDIG-SDNFKLDNQVVELMVRVL 208


>ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic-like [Glycine max]
          Length = 830

 Score =  128 bits (322), Expect = 1e-27
 Identities = 91/205 (44%), Positives = 112/205 (54%), Gaps = 6/205 (2%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           MEGTLFPNRP  PV   KP   P    LKF                      SF LDSLL
Sbjct: 1   MEGTLFPNRPVLPVPSHKPTQPP----LKFKPTFLPPQSPPPSPPP------SFQLDSLL 50

Query: 419 QHLLHISSPVKSSLTSSHVIPSHDQDSLSAHFRKDDKSSIPI----PRIGVD--DEGLLD 258
           QHL H+SS   ++ T + V PS D    + +F K   S  P     P I  D  D+    
Sbjct: 51  QHLQHLSSVPITTHTLTIVPPSLDN---TKNFNKSVNSKHPTLGSDPIIDEDQFDDAKFR 107

Query: 257 FLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLFEW 78
           FL  K KLLLNS++  P+  L  FF+S KFELL E D  SLLK LD+SG+ E+A+LLFEW
Sbjct: 108 FLSDKGKLLLNSVVGSPLHELNDFFNSVKFELL-EADFPSLLKALDLSGNWERALLLFEW 166

Query: 77  VVLNLDVSNSDKLDNQIIELMVKIL 3
             L+     + +LDNQ++ELMV+IL
Sbjct: 167 GWLHFGSDQNLRLDNQVVELMVRIL 191


>ref|XP_006409097.1| hypothetical protein EUTSA_v10022551mg [Eutrema salsugineum]
           gi|557110259|gb|ESQ50550.1| hypothetical protein
           EUTSA_v10022551mg [Eutrema salsugineum]
          Length = 838

 Score =  127 bits (319), Expect = 3e-27
 Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 13/212 (6%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPA-SHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSL 423
           M+G LFP++P +P+Q  KP  S  ++  +KF                      SFPLDSL
Sbjct: 1   MDGALFPHKPPYPIQSKKPPPSQSSNHSVKFSSATLHLPPPSPP---------SFPLDSL 51

Query: 422 LQHLLHISSPVKSSLTSSHVIPSHDQDSL-SAH-FRKDDKSSIP--IPRIGVD------- 276
           L HL+H+SS  +++ +++   PS +  S  SAH +  + KS+ P  IP +G++       
Sbjct: 52  LHHLVHLSSTPRNANSAAARFPSLEVSSTESAHKWGHEVKSARPDSIPVLGIEIGSDEGK 111

Query: 275 -DEGLLDFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEK 99
             +G L  L  K  +LLNSI+EQP+  L  FFDSAK ELL+  DLFSL+K LD SG+ E+
Sbjct: 112 FGDGSLKLLCKKEVVLLNSIVEQPLHGLSEFFDSAKPELLR-TDLFSLVKSLDDSGNWER 170

Query: 98  AILLFEWVVLNLDVSNSDKLDNQIIELMVKIL 3
           A+LLFEW+VL  + S + KLD+Q+IE++V+IL
Sbjct: 171 AVLLFEWLVLASN-SGALKLDHQVIEIVVRIL 201


>ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic-like [Glycine max]
          Length = 829

 Score =  127 bits (319), Expect = 3e-27
 Identities = 87/202 (43%), Positives = 109/202 (53%), Gaps = 3/202 (1%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           MEGTLFPNRP  P     P+  P  Q LKF                      SF LDSLL
Sbjct: 1   MEGTLFPNRPVLPA----PSHKPTQQPLKFKPTFLPPQSPPPPPP-------SFQLDSLL 49

Query: 419 QHLLHISSPVKSSLTSSHVIPSHDQD---SLSAHFRKDDKSSIPIPRIGVDDEGLLDFLP 249
           QHL H+SS   ++ T + V PSHD     + S H +     S  I      D+    FL 
Sbjct: 50  QHLQHLSSVPITTHTLTLVPPSHDNTKDFNNSVHSKHPTLGSGSIIDEDKFDDAKFGFLS 109

Query: 248 FKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLFEWVVL 69
            K KLL +SI+  P+  L  FF+S KFELL E D  SLLK LD+SG+ E+A+LLFEW  L
Sbjct: 110 DKGKLLFSSIVGSPLHELNDFFNSVKFELL-EADFPSLLKALDLSGNWERALLLFEWGWL 168

Query: 68  NLDVSNSDKLDNQIIELMVKIL 3
           +     + +LDNQ++ELMV+IL
Sbjct: 169 HFGSDQNLRLDNQVVELMVRIL 190


>ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75099137|sp|O64624.1|PP163_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g18940, chloroplastic; Flags: Precursor
           gi|3004555|gb|AAC09028.1| putative salt-inducible
           protein [Arabidopsis thaliana]
           gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14
           [Arabidopsis thaliana] gi|38564280|gb|AAR23719.1|
           At2g18940/F19F24.14 [Arabidopsis thaliana]
           gi|330251736|gb|AEC06830.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  126 bits (317), Expect = 5e-27
 Identities = 86/207 (41%), Positives = 119/207 (57%), Gaps = 8/207 (3%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPA-SHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSL 423
           M+G LFP++P +P+Q  +P  S  ++Q +KF                      SFPLDSL
Sbjct: 1   MDGALFPHKPPYPIQSKRPPPSQSSNQSIKFSSATLHLPPPSPP---------SFPLDSL 51

Query: 422 LQHLLHISSPVKSSLTSSHVIPSHDQDSLSAHFRK-----DDKSSIPIPRIGVDDE--GL 264
           L HL+H+SSP           P    +S +A F       D  SS PI  I +++E  G 
Sbjct: 52  LHHLVHLSSP-----------PPRHSNSAAARFPSLEVSTDSSSSKPILGIEIENERNGS 100

Query: 263 LDFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLF 84
           L  L  K  +L+NSI+EQP++ L  FFDS K ELL+  DL SL+KGLD SG  E+A+ LF
Sbjct: 101 LKLLCKKEVVLVNSIVEQPLTGLSRFFDSVKSELLR-TDLVSLVKGLDDSGHWERAVFLF 159

Query: 83  EWVVLNLDVSNSDKLDNQIIELMVKIL 3
           EW+VL+ + S + KLD+Q+IE+ V+IL
Sbjct: 160 EWLVLSSN-SGALKLDHQVIEIFVRIL 185


>gb|ESW10803.1| hypothetical protein PHAVU_009G239200g [Phaseolus vulgaris]
          Length = 831

 Score =  123 bits (309), Expect = 4e-26
 Identities = 87/205 (42%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           MEGTLFPNRP  P     P S     + K                       SF LDSLL
Sbjct: 1   MEGTLFPNRPVLPAPAPAPKSTQQPSKFK---------PTFLPPQSPPPPPPSFQLDSLL 51

Query: 419 QHLLHISSPVKSSLTSSHVIPSHDQDSLSAHFRKDDKSSIPIPRIG--VDDEGLLD---- 258
           QHL H+SS   ++ T + V  S D    S HF     S  P    G  VD + + D    
Sbjct: 52  QHLQHLSSVPITTPTLTLVPLSEDN---SIHFNNSLHSKHPSLASGPVVDQDRVHDAKFG 108

Query: 257 FLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLFEW 78
           FL  K KLLLNSI+  P+  L  FF+S +FELL EVD  SLLK LD+SG+ E+A+LLFEW
Sbjct: 109 FLSDKGKLLLNSIVGSPLHELNGFFNSVEFELL-EVDFLSLLKALDLSGNWERALLLFEW 167

Query: 77  VVLNLDVSNSDKLDNQIIELMVKIL 3
             L+     + +LDNQ++ELM++IL
Sbjct: 168 GWLHFGSEQNLRLDNQVVELMIRIL 192


>ref|XP_006453335.1| hypothetical protein CICLE_v10007460mg [Citrus clementina]
           gi|567922660|ref|XP_006453336.1| hypothetical protein
           CICLE_v10007460mg [Citrus clementina]
           gi|568840495|ref|XP_006474202.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic-like [Citrus sinensis]
           gi|557556561|gb|ESR66575.1| hypothetical protein
           CICLE_v10007460mg [Citrus clementina]
           gi|557556562|gb|ESR66576.1| hypothetical protein
           CICLE_v10007460mg [Citrus clementina]
          Length = 824

 Score =  119 bits (298), Expect = 8e-25
 Identities = 83/207 (40%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           MEGT+FPNRP  P++  K  S PN   LKF                      S PLDSL+
Sbjct: 1   MEGTIFPNRPVPPIR--KKPSKPNPP-LKFSSAKLPPPPPQSPP--------SVPLDSLI 49

Query: 419 QHLLHISSPVKSSLTSS-HVIPS-------HDQDSLSAHFRKDDKSSIPIPRIGVDDEGL 264
           QHL H+SS   SS +S  H+  +       + +   S    KDDK S       V ++G 
Sbjct: 50  QHLHHLSSSSSSSSSSPLHIAAASTAAKRANSEKPTSVFDGKDDKGS-------VSNDGS 102

Query: 263 LDFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLF 84
            +FL  + +L+ NSI+  P++SL  FFD+++ ELL  +DL ++LK LDVSG  E+A+LLF
Sbjct: 103 FEFLSKRGELIFNSIVGYPLNSLNEFFDNSQHELLG-IDLVTVLKALDVSGYRERALLLF 161

Query: 83  EWVVLNLDVSNSDKLDNQIIELMVKIL 3
           EW+ +N    N  KLD ++I+LMV+IL
Sbjct: 162 EWLAVNSSFENG-KLDKEVIQLMVRIL 187


>ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330024|gb|EFH60443.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 829

 Score =  118 bits (296), Expect = 1e-24
 Identities = 82/205 (40%), Positives = 117/205 (57%), Gaps = 6/205 (2%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTK-PASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSL 423
           M+G LFP++P +P+Q  + P    ++Q +KF                      SFPLDSL
Sbjct: 1   MDGALFPHKPPYPIQSKRSPPPQSSNQSIKFSSATLHLPPPSPP---------SFPLDSL 51

Query: 422 LQHLLHISSPVKSSLTSSHVIPSHDQDSLSAH-FRKDDKSSIPIPRIGVDDE----GLLD 258
           L HL+H+SS       +    PS +  + SAH +R +    +    +GV+ E    G L 
Sbjct: 52  LHHLVHLSSTPPRHAAAR--FPSLEVSTSSAHKWRHESTKPMSSSVLGVEIENERDGSLK 109

Query: 257 FLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLFEW 78
            L  K  +L+NSI+EQP+  L SFFDS K ELL   DL SL+KGLD SG  E+A+ LFEW
Sbjct: 110 LLCKKEVVLVNSIVEQPLPRLSSFFDSVKSELLT-TDLVSLVKGLDDSGHWERAVFLFEW 168

Query: 77  VVLNLDVSNSDKLDNQIIELMVKIL 3
           +VL+ + S + KLD+ +IE++V+IL
Sbjct: 169 LVLSSN-SGALKLDHHVIEILVRIL 192


>ref|XP_006296987.1| hypothetical protein CARUB_v10012981mg [Capsella rubella]
           gi|482565696|gb|EOA29885.1| hypothetical protein
           CARUB_v10012981mg [Capsella rubella]
          Length = 832

 Score =  114 bits (284), Expect = 3e-23
 Identities = 81/206 (39%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTK-PASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSL 423
           M+G LFP++P +P+Q  + P+    +Q +KF                      SFPLDSL
Sbjct: 1   MDGALFPHKPPYPIQTKRSPSPQSPNQSIKFSSATLHLPPPSPP---------SFPLDSL 51

Query: 422 LQHLLHISS--PVKSSLTSSHVIPSHDQDSLSAHFRKDDK----SSIPIPRIGVDDEGLL 261
           L HL+H+SS  P  ++     +  S D  S +  +R +      SS+    IG +  G L
Sbjct: 52  LHHLVHLSSTPPRHAAARFPSLEVSTDSSSSTHKWRHESSKPMSSSVLGGEIGNERGGSL 111

Query: 260 DFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLFE 81
             L  K  +L+NSI+EQP+  L  FFDS K ELL+  DL SL+KGLD SG  E+A  LFE
Sbjct: 112 KLLCKKEVVLVNSIVEQPLPGLNRFFDSVKSELLR-TDLVSLVKGLDDSGHWERAAFLFE 170

Query: 80  WVVLNLDVSNSDKLDNQIIELMVKIL 3
           W+V +   S + KLD+Q+IE++V+IL
Sbjct: 171 WLV-SPSNSGTLKLDHQVIEILVRIL 195


>gb|EXC05166.1| hypothetical protein L484_003973 [Morus notabilis]
          Length = 807

 Score =  112 bits (279), Expect = 1e-22
 Identities = 76/199 (38%), Positives = 109/199 (54%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSLL 420
           M+GTLFP+RP +PV  +   + P +   +                       SFP+DSLL
Sbjct: 1   MDGTLFPSRPVYPVHGSSSNTKPTNPPWQLNPTTPLPPPPSS----------SFPIDSLL 50

Query: 419 QHLLHISSPVKSSLTSSHVIPSHDQDSLSAHFRKDDKSSIPIPRIGVDDEGLLDFLPFKC 240
            HL             S  +P     SL    +    +SI +P    DD GLL+FL  K 
Sbjct: 51  HHL-------------SSNLPKPHYSSLQISLKP---TSIFVPHFQSDD-GLLEFLTTKG 93

Query: 239 KLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLDVSGSSEKAILLFEWVVLNLD 60
           K++ NSI++  +  L  FFDS + +L+ E+DL SLLK LD+SG+ EK++LLFEWV++NL 
Sbjct: 94  KMIFNSIIDLSLHDLNGFFDSVRNDLV-EIDLISLLKALDLSGNWEKSLLLFEWVLVNL- 151

Query: 59  VSNSDKLDNQIIELMVKIL 3
             +  KL++Q+IELMV+IL
Sbjct: 152 CPDYVKLNSQVIELMVRIL 170


>ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
           gi|449507064|ref|XP_004162923.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  112 bits (279), Expect = 1e-22
 Identities = 89/219 (40%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
 Frame = -1

Query: 599 MEGTLFPNRPAFPV-QPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSHSFPLDSL 423
           MEG LFPNR   PV +P +P     +Q LKF                      S P+D+L
Sbjct: 1   MEGALFPNRCPLPVSRPIQP-----NQTLKFNSTTLPPPLPPPSPPSS-----SIPIDTL 50

Query: 422 LQHLLHIS----------SPVKSSLTSSHVIPSHDQDSLSAHFRKDDKSSIPI-----PR 288
           LQHLLH+S           PV  +  +   +PS      S   R+D      +     P+
Sbjct: 51  LQHLLHLSLSPNDSAHKLKPVNVAKKNVAHLPSLQISMDSTKKRRDGAQLKKLVLNSAPQ 110

Query: 287 IGVDD----EGLLDFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLD 120
               D    +G L FL  K   LLNSI  +P  SL + FDS K ELL EVD+ SLLK LD
Sbjct: 111 FEYSDKEIRDGPLQFLSKKGICLLNSIAAEPFDSLNALFDSVKSELL-EVDIVSLLKALD 169

Query: 119 VSGSSEKAILLFEWVVLNLDVSNSDKLDNQIIELMVKIL 3
           V G SE+AILLFEWVV N  VS   KLD++ +ELM++IL
Sbjct: 170 VLGKSERAILLFEWVVSN-SVSGDVKLDSKAVELMIRIL 207


>ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359380|gb|ABN05846.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355483994|gb|AES65197.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  109 bits (273), Expect = 6e-22
 Identities = 82/219 (37%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
 Frame = -1

Query: 605 SAMEGTLFPNRPAFPVQPTKPASHPNHQRLKFXXXXXXXXXXXXXXXXXXXXSH--SFPL 432
           S+MEGTLFPNRP  P+   KP      Q LKF                        SFP+
Sbjct: 4   SSMEGTLFPNRPVLPLPTKKPT-----QALKFKPTFSHSPPPTPSQQSQSQTQTPPSFPI 58

Query: 431 DSLLQHLLHISS-PV--------------KSSLTSSHV-IPSHDQDSLSAHFRKDDKSSI 300
           DSLL HL H+SS P+               +  TS  + +   D++    H ++   SS+
Sbjct: 59  DSLLHHLKHLSSTPIITHTQTLVPNNNNNNTHFTSLQIQLDEKDENLQQGHTKRPTSSSV 118

Query: 299 PIPRIGVDDEGLLDFLPFKCKLLLNSILEQPISSLRSFFDSAKFELLQEVDLFSLLKGLD 120
                   D+    FL  K K +LN I+   ++ L  FF+S K ELL E D+  LLKGLD
Sbjct: 119 DYNHF---DDVKFGFLSGKSKFMLNCIVGSSLNDLIEFFNSVKGELL-ESDITGLLKGLD 174

Query: 119 VSGSSEKAILLFEWVVLNLDVSNSDKLDNQIIELMVKIL 3
           +SG+ E+A LLFEWV LN    N  K+D+Q +E MVK+L
Sbjct: 175 LSGNWERAFLLFEWVWLNFGSENM-KVDDQSVEFMVKML 212