BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029654
         (1227 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   376   e-173
gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus pe...   380   e-171
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...   376   e-171
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl...   374   e-170
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   377   e-168
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   380   e-168
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...   372   e-167
gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma ...   360   e-167
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor...   377   e-166
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   376   e-165
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   355   e-165
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   373   e-165
gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus...   365   e-165
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...   365   e-164
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   352   e-163
gb|EPS61068.1| hypothetical protein M569_13732 [Genlisea aurea]       353   e-163
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl...   362   e-162
ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   346   e-160
ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chlor...   343   e-157
ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chlor...   341   e-156

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
            gi|302144082|emb|CBI23187.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  376 bits (965), Expect(2) = e-173
 Identities = 177/236 (75%), Positives = 195/236 (82%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFATRALGL  PLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIRE  
Sbjct: 232  VGGTTDNIEESCATFATRALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKK 291

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       P+ IG++THYMRPVNIAPRLISEDFI GW LCQLEVLEC++VPWP+++ 
Sbjct: 292  VKKLYRALAAAPMPIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLI 351

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            EEK  IED GWP K+ A++CKINLLTGRTHQIR QLAACGAP+VGDS YMPAAIAE   P
Sbjct: 352  EEKYCIEDRGWPLKNSAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSP 411

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEQG 1213
            GLNPFGK KK+Y  ++ +  A+ EWIA HGKEP VAIGLQAC ISWDDGEH Y+ G
Sbjct: 412  GLNPFGKYKKKYTTENDRETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAG 467



 Score =  259 bits (662), Expect(2) = e-173
 Identities = 124/153 (81%), Positives = 138/153 (90%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YP Y RLLPCPSQ GPPRVEHLVVSEGG VL++ISK+L+LPPLFVADLIHFGAV+YALVC
Sbjct: 77  YPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFGAVYYALVC 136

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P+PP SATPEQ++ FK+ T P +LR+R S+KGKTIREAQKTFRIT  +EFVE GTYLRVH
Sbjct: 137 PEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGTYLRVH 196

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC EIDW+SRIIAVTESYVVLDKPAG
Sbjct: 197 VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAG 229


>gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  380 bits (976), Expect(2) = e-171
 Identities = 172/234 (73%), Positives = 195/234 (83%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFATRALGL  PL TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE  
Sbjct: 235  VGGTTDNIEESCATFATRALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKK 294

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       PV  G+ITHYMRP+N+APRLISEDFI  W LCQLEV+EC+++PWPN++ 
Sbjct: 295  VKKLYLALAAAPVPTGIITHYMRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVV 354

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            EEK  +EDCGWP+KD+AYECKINLLTGRTHQ+R QLAACGAP+VGDS YMPAA+AE   P
Sbjct: 355  EEKYCVEDCGWPSKDYAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESP 414

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYE 1207
            GLNPFG+ KK Y  ++ K  A+ EWIA HGKEP+VAIGLQAC ISWDDG+H++E
Sbjct: 415  GLNPFGQYKKHYTTENDKETAVAEWIARHGKEPNVAIGLQACQISWDDGKHTFE 468



 Score =  250 bits (639), Expect(2) = e-171
 Identities = 117/153 (76%), Positives = 134/153 (87%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YP Y RLLPCPS  GPPRVEHLVVSEGGPVLE+I K+L+LPP FVADLIHFGAV+YALVC
Sbjct: 80  YPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIHFGAVYYALVC 139

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P PP +ATPEQ++ FK+ T P +L+ R+S+KGKT+REAQKTFRIT  DEFVE GTYLRVH
Sbjct: 140 PKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHADEFVEAGTYLRVH 199

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC +IDW+SRIIAV+E +VVLDKPAG
Sbjct: 200 VHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAG 232


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
            gi|557551677|gb|ESR62306.1| hypothetical protein
            CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score =  376 bits (966), Expect(2) = e-171
 Identities = 172/234 (73%), Positives = 197/234 (84%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFA+RALGL  PLRTTHQIDNCTEGCVVLART+EYCS+FH KIRE  
Sbjct: 238  VGGTTDNIEESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKK 297

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       P+ +G++THYMRP+NIAPRLISEDFI GW LCQLEV+EC+KVPWP++  
Sbjct: 298  VKKLYLALTAAPLPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATV 357

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
             +  +IEDCGWP++D+AYECKI LLTGRTHQ+R QLAACGAP+VGDS YMPAAIA+ + P
Sbjct: 358  GKAYSIEDCGWPSRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSP 417

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYE 1207
            GLNPFGK +KEYA DD K +A+ EWI+ HGKEPSVAIGLQACHISWDDGE  YE
Sbjct: 418  GLNPFGKCQKEYASDDDKEMAVIEWISQHGKEPSVAIGLQACHISWDDGECCYE 471



 Score =  254 bits (648), Expect(2) = e-171
 Identities = 120/153 (78%), Positives = 135/153 (88%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YP Y RLLPCPSQ  PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFGAV+YALVC
Sbjct: 83  YPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFGAVYYALVC 142

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P PP +ATPEQ++ FK+ TDP +L +RSS+KGKT+REAQKTFRIT  D+ VE GTYLRVH
Sbjct: 143 PKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLRVH 202

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC +IDW+SRIIAVTES+VVLDKPAG
Sbjct: 203 VHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAG 235


>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 487

 Score =  374 bits (960), Expect(2) = e-170
 Identities = 170/234 (72%), Positives = 197/234 (84%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFA+RALGL  PLRTTHQIDNCTEGCVVLART+EYCS+FH KIRE  
Sbjct: 238  VGGTTDNIEESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKK 297

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       P+ +G++THYMRP+NIAPRL+SEDFI+GW LCQLEV+EC+KVPWP++  
Sbjct: 298  VKKLYLALTTAPLPVGIMTHYMRPINIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATV 357

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
             +  +IEDCGWP++D+AYECKI LLTGRTHQ+R QLAACGAP+VGDS YMPAAIA+ + P
Sbjct: 358  GKAYSIEDCGWPSRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSP 417

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYE 1207
            GLNPFGK +KEYA DD K +A+ EWI+ HG EPSVAIGLQACHISWDDGE  YE
Sbjct: 418  GLNPFGKCQKEYASDDDKEMAVIEWISQHGMEPSVAIGLQACHISWDDGECCYE 471



 Score =  253 bits (646), Expect(2) = e-170
 Identities = 120/153 (78%), Positives = 134/153 (87%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YP Y RLLPCPSQ  PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFGAV+YALVC
Sbjct: 83  YPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFGAVYYALVC 142

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P PP +ATPEQ++ FK+ TDP +L +RSS+KGKT+REAQKTFRIT  D+ VE GTYLRVH
Sbjct: 143 PKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLRVH 202

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC +IDW SRIIAVTES+VVLDKPAG
Sbjct: 203 VHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAG 235


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
            gi|550340110|gb|EEE85437.2| pseudouridine synthase family
            protein [Populus trichocarpa]
          Length = 470

 Score =  377 bits (968), Expect(2) = e-168
 Identities = 173/236 (73%), Positives = 196/236 (83%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFATRALGL APLRTTHQIDNCTEGCVVLART+E CSVFHGKIRE  
Sbjct: 226  VGGTTDNIEESCATFATRALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKT 285

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       PV IGV+ HYMRP+N+APRL+SE+FI GW LCQLEV+EC++VPWP+++ 
Sbjct: 286  VKKLYIALAASPVPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVM 345

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            EEK  ++DCGWP+KD AYECKINLLTGRTHQIR QLAA GAPLVGDS YMPAA+AE   P
Sbjct: 346  EEKYCVQDCGWPSKDHAYECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSP 405

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEQG 1213
            G NPFGK KK+Y  +D KA+A+EEW+  HGKEP+VAIGLQAC ISWDDG+H Y  G
Sbjct: 406  GCNPFGKYKKQYTSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAG 461



 Score =  243 bits (620), Expect(2) = e-168
 Identities = 113/153 (73%), Positives = 133/153 (86%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YP Y RLLPCPS   PPR+EHLVVSE GPVL++I K+L+LPPLFVADLIHFGAV YALVC
Sbjct: 71  YPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVC 130

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P PPR+ATPEQI+ F++ T P +L++R+S+KGKT+REAQKTFRIT  D+F+E G YLRVH
Sbjct: 131 PQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHVDQFLEAGMYLRVH 190

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC +IDW+SRII VTES+VVLDKPAG
Sbjct: 191 VHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAG 223


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  380 bits (977), Expect(2) = e-168
 Identities = 175/233 (75%), Positives = 196/233 (84%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFATRALG  APL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE  
Sbjct: 243  VGGTTDNIEESCATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKK 302

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       PV IG++THYMRP+N+APRL+SEDF+ GW LCQLEVLEC+KVPWP+S  
Sbjct: 303  VKKLYLALAAAPVPIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSSEI 362

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            +   N+EDCGW  KDFAYEC+INLLTGRTHQIR QLAAC AP+VGDS YMPAAIAE  CP
Sbjct: 363  QRTYNLEDCGWALKDFAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCP 422

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSY 1204
            G NPFGKNKK Y++++ K+LAI+EWIA HGKEPSVA+GLQAC ISWDDG+H Y
Sbjct: 423  GSNPFGKNKKLYSNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCY 475



 Score =  238 bits (608), Expect(2) = e-168
 Identities = 110/150 (73%), Positives = 131/150 (87%)
 Frame = +1

Query: 58  YGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPDP 237
           YGRL+PCP Q  PPRVEHLVV++ GPVLE+I K+L+LPPL+V DLI FGAV+YALVCP P
Sbjct: 91  YGRLMPCPLQNSPPRVEHLVVTKEGPVLEYICKALDLPPLYVEDLIQFGAVYYALVCPKP 150

Query: 238 PRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVHVHT 417
           P +A+PEQIK +++ TDP +LRQR+S+KGKT+REAQKTF+IT  DE VE GTYLRVHVH 
Sbjct: 151 PPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVHP 210

Query: 418 KRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           KRFPRC +IDW+SRIIAVT+ YVVLDKPAG
Sbjct: 211 KRFPRCYDIDWKSRIIAVTDDYVVLDKPAG 240


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 477

 Score =  372 bits (956), Expect(2) = e-167
 Identities = 171/234 (73%), Positives = 193/234 (82%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATF +RALGL  PL TTHQIDNCTEGCVVLARTK+YCSVFHGKIRE  
Sbjct: 235  VGGTTDNIEESCATFTSRALGLSTPLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKK 294

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       PV +G ITHYMRP+N+APRLISED I  W LCQLEV+EC+KVPWP+S+ 
Sbjct: 295  VKKLYLALAAAPVPLGTITHYMRPINVAPRLISEDSIERWSLCQLEVMECKKVPWPSSVI 354

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            EE+  +EDCGWP+KD+AYECKINLLTG+THQIR QLAACG PLVGDS YMPAAIAE   P
Sbjct: 355  EEEYGVEDCGWPSKDYAYECKINLLTGKTHQIRAQLAACGTPLVGDSMYMPAAIAEMENP 414

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYE 1207
             LNPFGK+KK YA ++ + +A+ EW+A HGKEP VAIGLQAC ISWDDGEHS+E
Sbjct: 415  ELNPFGKHKKHYAGENDEEIAVTEWMARHGKEPIVAIGLQACQISWDDGEHSFE 468



 Score =  244 bits (622), Expect(2) = e-167
 Identities = 113/151 (74%), Positives = 132/151 (87%)
 Frame = +1

Query: 55  PYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPD 234
           PY RLLPCPSQ GPPRVEHLVVSEGGPVLE+I K L+LP  FVADLIHFGAV+YALVCP 
Sbjct: 82  PYTRLLPCPSQNGPPRVEHLVVSEGGPVLEYICKKLDLPAQFVADLIHFGAVYYALVCPK 141

Query: 235 PPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVHVH 414
           PP +ATPEQ++ +K+ T P +L++R S+KGKT+REAQKTFRIT  D++VE GTYLRVHVH
Sbjct: 142 PPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRITHADQYVEDGTYLRVHVH 201

Query: 415 TKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
            KRFPRC +IDW+SR+IAVTE +VVLDKPAG
Sbjct: 202 PKRFPRCYDIDWKSRVIAVTEDFVVLDKPAG 232


>gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 491

 Score =  360 bits (924), Expect(2) = e-167
 Identities = 170/234 (72%), Positives = 189/234 (80%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFA RALG   PL+TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE  
Sbjct: 248  VGGTTDNIEESCATFANRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKK 307

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       P+ IGVITHYMRP+N+APRL+SEDFI GW LCQLEV+EC+KVPWP+ + 
Sbjct: 308  VKKLYLALTAAPLPIGVITHYMRPINMAPRLVSEDFIKGWYLCQLEVMECKKVPWPDYVI 367

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            +E   IED GWP KD AYECKINLLTGRTHQ+R QLAACGAP++GDS YMP  IAE   P
Sbjct: 368  QENYCIEDSGWPLKDHAYECKINLLTGRTHQVRAQLAACGAPILGDSMYMPPTIAEIANP 427

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYE 1207
            GLNPFGK KK  +++D K +AI EWI+  GKEPSVAIGLQAC ISWDDGEH Y+
Sbjct: 428  GLNPFGKYKKHTSEND-KEIAITEWISQFGKEPSVAIGLQACQISWDDGEHFYK 480



 Score =  255 bits (652), Expect(2) = e-167
 Identities = 120/153 (78%), Positives = 136/153 (88%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YP Y RLLPCPS  GPPRVEHLVVSEGGPVLE+I K+L+LPP+FVADLIHFGAV+YALVC
Sbjct: 93  YPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKALDLPPMFVADLIHFGAVYYALVC 152

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P PP SATPEQI+ FK+ T P +L +R+S++GKT+REAQKTFRIT  D+FVE GTYLRVH
Sbjct: 153 PQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFRITHVDQFVEAGTYLRVH 212

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC EIDW+SRIIAVT+SYVVLDKPAG
Sbjct: 213 VHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAG 245


>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
            lycopersicum]
          Length = 448

 Score =  377 bits (968), Expect(2) = e-166
 Identities = 173/233 (74%), Positives = 195/233 (83%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFATRALG  APL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE  
Sbjct: 208  VGGTTDNIEESCATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKK 267

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       PV IG++THYMRP+N+APRL+S DF+ GW LCQLEVLEC+KVPWP+S  
Sbjct: 268  VRKLYLALAAAPVPIGILTHYMRPINMAPRLVSRDFVKGWLLCQLEVLECQKVPWPSSEI 327

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            +   N+EDCGW  KD+AYEC+INLLTGRTHQIR QLAAC AP+VGDS YMPAAIAE  CP
Sbjct: 328  QRTYNLEDCGWALKDYAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCP 387

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSY 1204
            G NPFGKNKK Y++++ K+LAI+EWIA HGKEPSVA+GLQAC ISWDDG+H Y
Sbjct: 388  GSNPFGKNKKLYSNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCY 440



 Score =  235 bits (600), Expect(2) = e-166
 Identities = 108/150 (72%), Positives = 131/150 (87%)
 Frame = +1

Query: 58  YGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPDP 237
           YGRL+PCP Q  PPRVEHLVV++ GPV+E+I K+L+LPPL+V DLI FGAV+YALVCP P
Sbjct: 56  YGRLMPCPLQNSPPRVEHLVVTKEGPVVEYICKALDLPPLYVEDLIQFGAVYYALVCPKP 115

Query: 238 PRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVHVHT 417
           P +A+PEQIK +++ TDP +LR+R+S+KGKT+REAQKTF+IT  DE VE GTYLRVHVH 
Sbjct: 116 PPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVHP 175

Query: 418 KRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           KRFPRC +IDW+SRIIAVT+ YVVLDKPAG
Sbjct: 176 KRFPRCYDIDWKSRIIAVTDDYVVLDKPAG 205


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 476

 Score =  376 bits (966), Expect(2) = e-165
 Identities = 172/236 (72%), Positives = 199/236 (84%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGT DNIEESCATFATRALGL  PL+TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE  
Sbjct: 232  VGGTADNIEESCATFATRALGLTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKK 291

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       PV +GVI +YMRPVNIAPRL+SE+F++GW LCQLEVLECRKVPWP++  
Sbjct: 292  VKKLYLALAASPVPVGVIKNYMRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDAAI 351

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            EEK ++EDCGWP+KDFAYECKINLLTGRTHQIR QLAA GAPLVGDS YMPAA+AE   P
Sbjct: 352  EEKYSVEDCGWPSKDFAYECKINLLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMANP 411

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEQG 1213
            GLNPFGK++K+Y ++  +++A+ EW+A HGKEP VAIGLQAC ISWD+G+H Y+ G
Sbjct: 412  GLNPFGKHRKQYTNESDESMAVAEWVAQHGKEPKVAIGLQACEISWDEGKHIYKAG 467



 Score =  234 bits (597), Expect(2) = e-165
 Identities = 110/150 (73%), Positives = 130/150 (86%)
 Frame = +1

Query: 58  YGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPDP 237
           Y RLLPCPS   PPR+EHLVV E GPVL++I K+L+LPPLFVADLI FGAV YALVCP P
Sbjct: 80  YDRLLPCPSYNRPPRIEHLVVLEEGPVLDYICKALDLPPLFVADLIDFGAVHYALVCPRP 139

Query: 238 PRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVHVHT 417
           P +ATPEQI+ F+K+T P +L++RSS+KGKT+REAQKTFRIT  D+++E GTYLRVHVH 
Sbjct: 140 PTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHVDQYLEAGTYLRVHVHP 199

Query: 418 KRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           KRFPRC +IDW+SRIIAVT+ YVVLDKPAG
Sbjct: 200 KRFPRCYDIDWKSRIIAVTDCYVVLDKPAG 229


>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  355 bits (910), Expect(2) = e-165
 Identities = 166/236 (70%), Positives = 187/236 (79%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFATRALGL +PL TTHQIDNCTEGCV+ ARTKEYCS+FHGKIRE  
Sbjct: 231  VGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKK 290

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       PV +G+ITHYMRP+NIAPRL+S+D I GW +CQLEVLECR+V WP++  
Sbjct: 291  VMKLYLALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADI 350

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            E K  +EDCGWP+K  AYEC+INLLTGRTHQIR QLA CGAPLVGDS YMPA +AE   P
Sbjct: 351  EAKYRVEDCGWPSKKKAYECRINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSP 410

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEQG 1213
            GLNPFGK KKEY +++ K  A+ EW A HGKEP+VAIGLQA  ISWD  EHSY  G
Sbjct: 411  GLNPFGKCKKEYTNEEDKETAVAEWSALHGKEPAVAIGLQAYEISWDSREHSYNAG 466



 Score =  256 bits (653), Expect(2) = e-165
 Identities = 120/153 (78%), Positives = 134/153 (87%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YP Y RLLPCPS   PPRVEH+VV E GPV+E+I KSLNLPPL+VADLIHFGAV+YALVC
Sbjct: 76  YPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYALVC 135

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P PP++ATPEQI+ FKK+T+P  L+ R S+KGKT+REAQKTFRIT  DEFVE GTYLRVH
Sbjct: 136 PQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVH 195

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC EIDW+SRIIAVTESYVVLDKPAG
Sbjct: 196 VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAG 228


>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 395

 Score =  373 bits (957), Expect(2) = e-165
 Identities = 170/236 (72%), Positives = 195/236 (82%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTT+NIEE+CATFATRALGL  PL+TTHQIDNCTEGCVVLART EYC VFHGKIRE  
Sbjct: 155  VGGTTNNIEETCATFATRALGLTIPLKTTHQIDNCTEGCVVLARTNEYCPVFHGKIRENK 214

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       PV +GVITHYMRP NI PRL+SE+FI GW LCQLEVLECRKVPWP+++ 
Sbjct: 215  VKKLYLALAACPVPVGVITHYMRPGNIPPRLVSEEFIEGWYLCQLEVLECRKVPWPDTVT 274

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            EEK ++EDCGWP+KDFAYECKINLLTGRTHQIR QLAACGAPLVGDS YMPAAIAE   P
Sbjct: 275  EEKYSVEDCGWPSKDFAYECKINLLTGRTHQIRAQLAACGAPLVGDSMYMPAAIAEMANP 334

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEQG 1213
            G+NPFGK+KK+Y  ++ +++ + EW+  HGKEPS+AIGLQAC ISW D +H Y+ G
Sbjct: 335  GVNPFGKHKKQYTGENDESMGVAEWVERHGKEPSIAIGLQACEISWGDSKHIYKAG 390



 Score =  237 bits (605), Expect(2) = e-165
 Identities = 111/150 (74%), Positives = 133/150 (88%)
 Frame = +1

Query: 58  YGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPDP 237
           Y RLLPCPSQ  PPRVEHLVV E GPVL++I K+L+LPPLFVADLIHFGAV YALVCP P
Sbjct: 3   YDRLLPCPSQNRPPRVEHLVVLEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVCPQP 62

Query: 238 PRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVHVHT 417
           P +ATPEQI+ F+++T P +L++R+S+KGKT+REAQKTFR++S  +F+E GTYLRV+VH 
Sbjct: 63  PPTATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSVHQFLEVGTYLRVYVHP 122

Query: 418 KRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           +RFPRC EIDW+SRIIAVTESYVVLDKPAG
Sbjct: 123 RRFPRCYEIDWKSRIIAVTESYVVLDKPAG 152


>gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
          Length = 478

 Score =  365 bits (937), Expect(2) = e-165
 Identities = 169/236 (71%), Positives = 188/236 (79%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFATRALGL APL TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE  
Sbjct: 237  VGGTTDNIEESCATFATRALGLTAPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKK 296

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       P+  G+ITHYMRP+N+APRLISEDFI GW +CQLE+ ECRKVPWP    
Sbjct: 297  VKKLYLALASSPLPTGIITHYMRPINMAPRLISEDFIKGWLMCQLEIQECRKVPWPTPSI 356

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            ++K  +EDCGWP +DFAYECKINLLTGRTHQIR Q AAC APLVGDS YMPAAI + + P
Sbjct: 357  QDKYCVEDCGWPYQDFAYECKINLLTGRTHQIRAQFAACRAPLVGDSMYMPAAIGDMSNP 416

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEQG 1213
            GLNPFGK K++++ +  K  A+  WIA HGKEP VAIGLQAC ISWDD +H YE G
Sbjct: 417  GLNPFGKYKRDFSSESEKETAVVNWIAQHGKEPGVAIGLQACQISWDDDDHFYESG 472



 Score =  244 bits (622), Expect(2) = e-165
 Identities = 116/152 (76%), Positives = 129/152 (84%)
 Frame = +1

Query: 52  PPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCP 231
           P Y RLLPCP    PPRVEHLVVSEGGPVLE I K+L LPPL+V DLI FGAV+YALVCP
Sbjct: 83  PKYDRLLPCPLHKTPPRVEHLVVSEGGPVLEHICKALELPPLYVTDLIQFGAVYYALVCP 142

Query: 232 DPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVHV 411
            PP SAT EQI+ FK+ T+P +LRQR+S+KGKT+REAQKTFR+T  D+FVE GTYLRVHV
Sbjct: 143 QPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVREAQKTFRVTHADQFVEPGTYLRVHV 202

Query: 412 HTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           H KRFPRC EIDWRSRII+V ESYVVLDKPAG
Sbjct: 203 HPKRFPRCYEIDWRSRIISVAESYVVLDKPAG 234


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  365 bits (936), Expect(2) = e-164
 Identities = 166/236 (70%), Positives = 191/236 (80%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFATRALG+  PL TTHQIDNCTEGCVVLARTK+YCS+FHGKIRE  
Sbjct: 237  VGGTTDNIEESCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKK 296

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       P+  G+ITHYMRP+N+APRLISEDFI GW LCQLEVLECRK+PWP +  
Sbjct: 297  VKKLYLALAASPLPTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAI 356

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            ++K  +EDCGWP++D+AYECKINLLTG+THQIR Q AA  APL+GDS YMPAAIA+ + P
Sbjct: 357  QDKYCVEDCGWPSQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNP 416

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEQG 1213
            GLNPFGK KK+++ +  K  A+  W+A HGKEPSVAIGLQAC ISWDD EH YE G
Sbjct: 417  GLNPFGKYKKDFSSESEKETAVVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAG 472



 Score =  243 bits (619), Expect(2) = e-164
 Identities = 113/153 (73%), Positives = 132/153 (86%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           +P Y RLLPCPS   PPR+EHLV+SEGGPVLE I K+L+LPPL+V+DLI FGAV+YALVC
Sbjct: 82  FPKYDRLLPCPSHKNPPRIEHLVISEGGPVLELICKALDLPPLYVSDLIQFGAVYYALVC 141

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P PP +AT EQI+ FK+ T+P +LR+R+S+KGKT+REAQKTFR+T  D+FVE GTYLRVH
Sbjct: 142 PQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLRVH 201

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPR  EIDWRSRIIAV ESYVVLDKPAG
Sbjct: 202 VHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAG 234


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  352 bits (903), Expect(2) = e-163
 Identities = 164/236 (69%), Positives = 186/236 (78%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFATRALGL +PL TTHQIDNCTEGCV+ ARTKEYCS+FHGKIRE  
Sbjct: 231  VGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKK 290

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       PV +G+ITHYMRP+NIAPRL+S+D I GW +CQLEVLECR+V WP++  
Sbjct: 291  VMKLYLALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADT 350

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            E K  +EDCGWP+K  AYEC+INLLTGRTHQIR QLA CGAPLVGDS YMPA +AE   P
Sbjct: 351  EAKYRVEDCGWPSKKKAYECRINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSP 410

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEQG 1213
            GLNPFGK KKEY +++ K  ++ EW A HGKEP+VAIGLQA  ISWD  EH Y  G
Sbjct: 411  GLNPFGKCKKEYTNEEDKETSVAEWSALHGKEPAVAIGLQAYEISWDSREHIYNAG 466



 Score =  252 bits (644), Expect(2) = e-163
 Identities = 119/153 (77%), Positives = 132/153 (86%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YP Y RLLPCPS   PPRVEH+VV E GPV+E+I KSLNLPPL+VADLIHFGAV+YALVC
Sbjct: 76  YPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYALVC 135

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P PP++ATPEQI+ FK  T+P  L+ R S+KGKT+REAQKTFRIT  DEFVE GTYLRVH
Sbjct: 136 PQPPKTATPEQIRLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVH 195

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC EIDW+SRIIAVTESYVVLDKPAG
Sbjct: 196 VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAG 228


>gb|EPS61068.1| hypothetical protein M569_13732 [Genlisea aurea]
          Length = 461

 Score =  353 bits (907), Expect(2) = e-163
 Identities = 170/242 (70%), Positives = 189/242 (78%), Gaps = 6/242 (2%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEE CATFA+RALGL  PLRTTHQIDNCTEGCVV A+TKEYCSVFHGKIRE  
Sbjct: 217  VGGTTDNIEECCATFASRALGLSEPLRTTHQIDNCTEGCVVFAKTKEYCSVFHGKIREKT 276

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       PV IG+ITHYMRPVNIAPRLIS DFISGW +C+LEVLECRKV WP+ I 
Sbjct: 277  VKKLYLALTSAPVPIGIITHYMRPVNIAPRLISSDFISGWHMCRLEVLECRKVRWPSEIA 336

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            + K N++DCGWP ++ AYECKINLLTG+THQIR QLAA GAPLVGDS YMPAA++E   P
Sbjct: 337  QRKQNVDDCGWPNRESAYECKINLLTGKTHQIRAQLAARGAPLVGDSMYMPAAMSEMQFP 396

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGE------HSYE 1207
            GLNPFG NK+EY +D+     +E WI  HGKEPS AIGLQA H+SWDD E      HSYE
Sbjct: 397  GLNPFGSNKREYEEDE--VWGMEGWIKAHGKEPSGAIGLQARHVSWDDDEQQQRRRHSYE 454

Query: 1208 QG 1213
             G
Sbjct: 455  AG 456



 Score =  249 bits (637), Expect(2) = e-163
 Identities = 118/153 (77%), Positives = 133/153 (86%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YPPYGRLLPCP +   PRVEHLVVSEGGPVLE+IS +L +PPLFVADLIHFGAVFYALVC
Sbjct: 62  YPPYGRLLPCPIENTLPRVEHLVVSEGGPVLEYISNALEIPPLFVADLIHFGAVFYALVC 121

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           PDPP +A PE+++ ++KYTD  +L +R S+KGKT REAQKTFRIT  DE VETGTYLRVH
Sbjct: 122 PDPPSTAAPEEMEIYRKYTDRSVLSKRPSIKGKTRREAQKTFRITRTDELVETGTYLRVH 181

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC EIDW+SRIIAVT +YVVLDKPAG
Sbjct: 182 VHPKRFPRCYEIDWKSRIIAVTANYVVLDKPAG 214


>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  362 bits (930), Expect(2) = e-162
 Identities = 169/234 (72%), Positives = 189/234 (80%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTTDNIEESCATFATRALG+  PL TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE  
Sbjct: 237  VGGTTDNIEESCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKK 296

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       P+  G+ITHYMRP+++APRLISEDFI GW LCQLEVLECRKVPWP +  
Sbjct: 297  VKKFYLALAAFPLPTGIITHYMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAI 356

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            ++K  IEDCGWP++D+AYECKINLLTG+THQIR Q AA  APL+GDS YMPAAIA  + P
Sbjct: 357  QDKYCIEDCGWPSQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNP 416

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYE 1207
            GLNPFGK KK+++ +  K  A+  WIA HGKEPSVAIGLQAC ISWDD EH YE
Sbjct: 417  GLNPFGKYKKDFSSESEKETAVVNWIAQHGKEPSVAIGLQACQISWDDDEHFYE 470



 Score =  238 bits (606), Expect(2) = e-162
 Identities = 112/150 (74%), Positives = 129/150 (86%)
 Frame = +1

Query: 58  YGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPDP 237
           Y RLLPCPS   PPR+EHLVVSEGGPVLE I K+L+LPPL+V+DLI FGAV+YALVCP P
Sbjct: 85  YDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDLPPLYVSDLIQFGAVYYALVCPQP 144

Query: 238 PRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVHVHT 417
           P +AT EQI+ FK+ T+P +LR+R+S+KGKT+REAQKTFR+T  D+FVE GTYLRVHVH 
Sbjct: 145 PPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLRVHVHP 204

Query: 418 KRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           KR PRC EIDWRSRII V ESYVVLDKPAG
Sbjct: 205 KRSPRCYEIDWRSRIITVAESYVVLDKPAG 234


>ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cicer arietinum]
          Length = 467

 Score =  346 bits (888), Expect(2) = e-160
 Identities = 165/248 (66%), Positives = 183/248 (73%), Gaps = 12/248 (4%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTT N EESCA FATRAL L  PL TTHQIDNCTEGCVVLAR KEYCSVFHGKIRE  
Sbjct: 214  VGGTTGNTEESCANFATRALELTTPLMTTHQIDNCTEGCVVLARNKEYCSVFHGKIREKK 273

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISED------------FISGWRLCQLEVL 829
                       P+  G+I HYMRP+N+APRLISE             F  GW +CQLEVL
Sbjct: 274  VKKIYLALAASPLPTGIIKHYMRPINMAPRLISEGXTTQIGMHSKDYFNKGWHICQLEVL 333

Query: 830  ECRKVPWPNSIKEEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSA 1009
            EC K+PWP ++ +EK  +EDCGWP++D+AYECKINLLTGRTHQIR Q AAC APL+GDS 
Sbjct: 334  ECIKIPWPTTVVQEKYCVEDCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPLIGDSM 393

Query: 1010 YMPAAIAEANCPGLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDD 1189
            YMPAAIAE   PGLNPFGK KK++  +  K  A+  WIA HGKEPSVAIGLQAC ISWDD
Sbjct: 394  YMPAAIAEMMNPGLNPFGKYKKDFTSESEKETAVINWIAQHGKEPSVAIGLQACQISWDD 453

Query: 1190 GEHSYEQG 1213
            GEH YE G
Sbjct: 454  GEHIYEAG 461



 Score =  246 bits (628), Expect(2) = e-160
 Identities = 115/153 (75%), Positives = 134/153 (87%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YP Y RLLPCP+   PPR+EH+VVSEGGPVLE+I K+L+LPPLFVADLI FGAV++ALVC
Sbjct: 59  YPKYNRLLPCPTHKIPPRIEHIVVSEGGPVLEYICKALDLPPLFVADLIKFGAVYFALVC 118

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P PP +AT E+I+ FKK T+PL+LR+R+S+KGKTIREAQKTF +T  D+FVE GTYLRVH
Sbjct: 119 PKPPPTATAEEIRVFKKATEPLVLRKRASIKGKTIREAQKTFLVTDVDQFVEPGTYLRVH 178

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC EIDWRSRIIAV ESYV+LDKPAG
Sbjct: 179 VHPKRFPRCYEIDWRSRIIAVEESYVILDKPAG 211


>ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  343 bits (880), Expect(2) = e-157
 Identities = 163/236 (69%), Positives = 184/236 (77%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTT+NIEE+C TFATRALGL +PL TTHQIDNCTEGCV+LARTKEYCS+FH KIRE  
Sbjct: 231  VGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKK 290

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       P+  G++THYMRP N+APRL+S D I GW LCQLEVLECR+V WP++  
Sbjct: 291  VTKLYLALVAVPLPKGIMTHYMRPNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADI 350

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            E K +IEDCGWP+K  A+ECKINLLTGRTHQIR QLA CGAPLVGDS YMPA +AE   P
Sbjct: 351  EAKYSIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMANP 410

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEQG 1213
            GLNPFGK KKEY  ++ K  A+ EWIA HGKEP+VAIGLQA  ISWD  EHSY  G
Sbjct: 411  GLNPFGKCKKEYTSEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSREHSYNAG 466



 Score =  239 bits (611), Expect(2) = e-157
 Identities = 114/153 (74%), Positives = 131/153 (85%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YP Y RLLPC S   PPRVEHLVV EGGPV+E+ISKSL+LPP++VADLIHFGAV+YALVC
Sbjct: 76  YPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVC 135

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P PP +A+ E+I+ FKK+T P  L  R S+KGKT+REAQKTFRIT  DEFVE GTYLRV+
Sbjct: 136 PQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVY 195

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC E+DW+SRIIAVT+SYVVLDKPAG
Sbjct: 196 VHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAG 228


>ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  341 bits (875), Expect(2) = e-156
 Identities = 163/236 (69%), Positives = 184/236 (77%)
 Frame = +2

Query: 506  VGGTTDNIEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXX 685
            VGGTT+NIEE+C TFATRALGL +PL TTHQIDNCTEGCV+LARTKEYCS+FH KIRE  
Sbjct: 231  VGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKK 290

Query: 686  XXXXXXXXXXXPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIK 865
                       P+  G++THYMRP N+APRL+S D I GW LCQLEVLECR+V WP++  
Sbjct: 291  VTKLYLALVAVPLPKGIMTHYMRPNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADI 350

Query: 866  EEKNNIEDCGWPAKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCP 1045
            E K +IEDCGWP+K  A+ECKINLLTGRTHQIR QLA  GAPLVGDS YMPAA+AE   P
Sbjct: 351  EAKYSIEDCGWPSKKKAFECKINLLTGRTHQIRVQLADYGAPLVGDSIYMPAAVAEMANP 410

Query: 1046 GLNPFGKNKKEYADDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEQG 1213
            GLNPFGK KKEY  ++ K  A+ EWIA HGKEP+VAIGLQA  ISWD GEH Y  G
Sbjct: 411  GLNPFGKCKKEYTSEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSGEHIYNAG 466



 Score =  239 bits (611), Expect(2) = e-156
 Identities = 114/153 (74%), Positives = 131/153 (85%)
 Frame = +1

Query: 49  YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 228
           YP Y RLLPC S   PPRVEHLVV EGGPV+E+ISKSL+LPP++VADLIHFGAV+YALVC
Sbjct: 76  YPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVC 135

Query: 229 PDPPRSATPEQIKAFKKYTDPLLLRQRSSVKGKTIREAQKTFRITSPDEFVETGTYLRVH 408
           P PP +A+ E+I+ FKK+T P  L  R S+KGKT+REAQKTFRIT  DEFVE GTYLRV+
Sbjct: 136 PQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVY 195

Query: 409 VHTKRFPRCNEIDWRSRIIAVTESYVVLDKPAG 507
           VH KRFPRC E+DW+SRIIAVT+SYVVLDKPAG
Sbjct: 196 VHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAG 228