BLASTX nr result

ID: Rehmannia25_contig00029587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029587
         (503 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ric...    61   2e-07
ref|NP_001234357.1| GAMyb-like1 [Solanum lycopersicum] gi|121281...    61   2e-07
ref|XP_006471261.1| PREDICTED: transcription factor GAMYB-like i...    57   3e-06
ref|XP_006432327.1| hypothetical protein CICLE_v100007561mg, par...    57   3e-06

>ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223535153|gb|EEF36833.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 556

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
 Frame = +3

Query: 33  CVVKVKEEASDLCPMQYDDKVETTNQMILSRPDLLLASNCLAPMKH-------PTNVMGT 191
           C+VK +  +    P +  DK ETT ++ ++RPD LLAS+ L             T+ + T
Sbjct: 456 CIVKTELVSQPWSPER--DK-ETTTRVDITRPDALLASDWLGQGSGYIKDQVIMTDNIAT 512

Query: 192 FLGDDWSRDCKQMDTGSTSSAQGRGRNSCAWNAMPTV 302
            LGDD S D KQM  G+++S Q  G  SCAWN MP V
Sbjct: 513 LLGDDLSSDYKQMSAGASTSNQVWGLGSCAWNNMPAV 549


>ref|NP_001234357.1| GAMyb-like1 [Solanum lycopersicum] gi|121281632|gb|ABM53273.1|
           GAMyb-like1 [Solanum lycopersicum]
          Length = 537

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/84 (42%), Positives = 49/84 (58%)
 Frame = +3

Query: 42  KVKEEASDLCPMQYDDKVETTNQMILSRPDLLLASNCLAPMKHPTNVMGTFLGDDWSRDC 221
           ++K+E  DL P+  DD+  T+NQ I S P    A+N LA  K P    G+   DD   DC
Sbjct: 449 EIKQEIGDLSPL--DDEDNTSNQTIFSSPKTQHANNHLAS-KDP---FGSCFFDDCDWDC 502

Query: 222 KQMDTGSTSSAQGRGRNSCAWNAM 293
           KQ+   +TSS Q  G NSC+W+A+
Sbjct: 503 KQIHAVTTSSGQANGHNSCSWDAI 526


>ref|XP_006471261.1| PREDICTED: transcription factor GAMYB-like isoform X1 [Citrus
           sinensis] gi|568834258|ref|XP_006471262.1| PREDICTED:
           transcription factor GAMYB-like isoform X2 [Citrus
           sinensis] gi|568834260|ref|XP_006471263.1| PREDICTED:
           transcription factor GAMYB-like isoform X3 [Citrus
           sinensis]
          Length = 551

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
 Frame = +3

Query: 42  KVKEEASDLCPMQYDDKVETTNQMILSRPDLLLASNCL----APMKHP---TNVMGTFLG 200
           KVK E  D       D+ + ++ + +S+PD LLAS+      + +K P    + + T LG
Sbjct: 453 KVKSEPVDQA--WTPDREKESSNLYVSQPDALLASDWFEHGSSYVKDPIVMNDAIATLLG 510

Query: 201 DDWSRDCKQMDTGSTSSAQGRGRNSCAWNAMPTV 302
           DD   + KQ+ TG+++ +QG G +SCAWN MP V
Sbjct: 511 DDLRSEYKQISTGTSAPSQGWGFSSCAWNNMPAV 544


>ref|XP_006432327.1| hypothetical protein CICLE_v100007561mg, partial [Citrus
           clementina] gi|557534449|gb|ESR45567.1| hypothetical
           protein CICLE_v100007561mg, partial [Citrus clementina]
          Length = 100

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
 Frame = +3

Query: 42  KVKEEASDLCPMQYDDKVETTNQMILSRPDLLLASNCL----APMKHP---TNVMGTFLG 200
           KVK E  D       D+ + ++ + +S+PD LLAS+      + +K P    + + T LG
Sbjct: 2   KVKSEPVDQA--WTPDREKESSNLYVSQPDALLASDWFEHGSSYVKDPIVMNDAIATLLG 59

Query: 201 DDWSRDCKQMDTGSTSSAQGRGRNSCAWNAMPTV 302
           DD   + KQ+ TG+++ +QG G +SCAWN MP V
Sbjct: 60  DDLRSEYKQISTGTSAPSQGWGFSSCAWNNMPAV 93


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