BLASTX nr result

ID: Rehmannia25_contig00029529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029529
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004244645.1| PREDICTED: uncharacterized WD repeat-contain...    69   5e-10
ref|XP_004244644.1| PREDICTED: uncharacterized WD repeat-contain...    69   5e-10
ref|XP_006352232.1| PREDICTED: uncharacterized protein LOC102579...    69   7e-10
ref|XP_004245475.1| PREDICTED: uncharacterized protein LOC101244...    67   2e-09
ref|XP_006343802.1| PREDICTED: WD repeat-containing protein 44-l...    65   7e-09

>ref|XP_004244645.1| PREDICTED: uncharacterized WD repeat-containing protein
           C3H5.08c-like isoform 2 [Solanum lycopersicum]
          Length = 710

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = +1

Query: 166 MMASYSETE-DQFFVTXXXXXXXXXXXXXXXXGCLSSGLGNCALGYEFWTKEPDSVDERR 342
           MM +YSETE D FF                   C  + +   ALGYEFWT++P+SVDERR
Sbjct: 1   MMGTYSETEEDSFFDICAETGSLSDLGSDGSDACTRNEISERALGYEFWTQDPESVDERR 60

Query: 343 GRFLRWMGLSSDWHKTSEDEE 405
            RFL+WMGL+S+  ++   +E
Sbjct: 61  DRFLKWMGLNSNCDRSDCSDE 81


>ref|XP_004244644.1| PREDICTED: uncharacterized WD repeat-containing protein
           C3H5.08c-like isoform 1 [Solanum lycopersicum]
          Length = 733

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = +1

Query: 166 MMASYSETE-DQFFVTXXXXXXXXXXXXXXXXGCLSSGLGNCALGYEFWTKEPDSVDERR 342
           MM +YSETE D FF                   C  + +   ALGYEFWT++P+SVDERR
Sbjct: 1   MMGTYSETEEDSFFDICAETGSLSDLGSDGSDACTRNEISERALGYEFWTQDPESVDERR 60

Query: 343 GRFLRWMGLSSDWHKTSEDEE 405
            RFL+WMGL+S+  ++   +E
Sbjct: 61  DRFLKWMGLNSNCDRSDCSDE 81


>ref|XP_006352232.1| PREDICTED: uncharacterized protein LOC102579447 isoform X1 [Solanum
           tuberosum] gi|565371275|ref|XP_006352233.1| PREDICTED:
           uncharacterized protein LOC102579447 isoform X2 [Solanum
           tuberosum]
          Length = 711

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = +1

Query: 166 MMASYSETE-DQFFVTXXXXXXXXXXXXXXXXGCLSSGLGNCALGYEFWTKEPDSVDERR 342
           MM +YSETE D FF                   C  + +   ALGYEFWT++P+SVDERR
Sbjct: 1   MMGTYSETEEDSFFDIRAETGSLSDLGLDGSDACTRNEISERALGYEFWTQDPESVDERR 60

Query: 343 GRFLRWMGLSSDWHKTSEDEE 405
            RFL+WMGL+S+  ++   +E
Sbjct: 61  HRFLKWMGLNSNCDRSDCSDE 81


>ref|XP_004245475.1| PREDICTED: uncharacterized protein LOC101244103 [Solanum
           lycopersicum]
          Length = 729

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +1

Query: 166 MMASYSETEDQ-FFVTXXXXXXXXXXXXXXXXGCLSSGLGNCALGYEFWTKEPDSVDERR 342
           MM SYSE E++ FF +                 C+ S    C LGY+ W K+P+SVDERR
Sbjct: 1   MMGSYSEFEEECFFDSREEITSVSDLGSDCNETCVRSLGDECVLGYDLWNKDPESVDERR 60

Query: 343 GRFLRWMGLSSDW 381
            RFL+W+GLSS W
Sbjct: 61  DRFLKWIGLSSSW 73


>ref|XP_006343802.1| PREDICTED: WD repeat-containing protein 44-like [Solanum tuberosum]
          Length = 728

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = +1

Query: 166 MMASYSETEDQ-FFVTXXXXXXXXXXXXXXXXGCLSSGLGNCALGYEFWTKEPDSVDERR 342
           MM +YSE E++ FF +                 C+ +    C LGY+FW K+P+SVDERR
Sbjct: 1   MMGNYSEFEEECFFDSREEISSVSDLGSDCNETCVRNLGDECVLGYDFWNKDPESVDERR 60

Query: 343 GRFLRWMGLSSDWHKTSEDEE 405
            RFL+W+G SS W      E+
Sbjct: 61  DRFLKWIGSSSSWDSPDGKEQ 81


Top