BLASTX nr result
ID: Rehmannia25_contig00029411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00029411
(460 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 87 2e-15
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 87 2e-15
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 83 4e-14
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 81 2e-13
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera] 80 2e-13
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 78 1e-12
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 77 2e-12
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 76 4e-12
gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group] 75 1e-11
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 73 3e-11
gb|ABA97279.2| retrotransposon protein, putative, Ty1-copia subc... 72 8e-11
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 71 1e-10
ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255... 70 3e-10
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 70 3e-10
ref|XP_006605035.1| PREDICTED: uncharacterized protein LOC102664... 70 4e-10
emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera] 69 5e-10
emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera] 69 7e-10
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group] 69 7e-10
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group] 69 7e-10
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 69 8e-10
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 87.4 bits (215), Expect = 2e-15
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Frame = +3
Query: 9 GGR----GYFNNMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXX 176
GGR G +N P+CQ+C+ GHT C+YR + NFVP
Sbjct: 264 GGRANVGGGTDNRPKCQLCYKRGHTVCDCWYRYDENFVPDER------------------ 305
Query: 177 XXXXXXFSPHVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAG 356
A T+ + D +WY D+GAT+HVT +++ L V ++HG ++V TA
Sbjct: 306 ------------FAGTAVSYGV-DTNWYLDTGATDHVTGELDKLTVRDKYHGNDQVHTAS 352
Query: 357 GSGIDIAHIGNSIVKS-SCNTH 419
G+G++I+HIGNS+VK+ S N H
Sbjct: 353 GAGMEISHIGNSVVKTPSRNLH 374
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 87.0 bits (214), Expect = 2e-15
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Frame = +3
Query: 3 GRG-GRGYFNNMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXX 179
GRG GR P+CQ+C+ GHT +CFYR + NF N P G
Sbjct: 169 GRGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNF--HGNMPANGPTPGVLGSGARNGA 226
Query: 180 XXXXXFSPHVNI---------------ANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNV 314
+ +VN+ A ++ E Q+ W+PDSGATNHVT D+ LN
Sbjct: 227 SGSISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNS 286
Query: 315 ASEFHGPERVQTAGGSGIDIAHIGNSIVKSSCNTHSHSF 431
+E++G ++ G+G+ I+HIG S+ SS + + F
Sbjct: 287 GAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLF 325
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 82.8 bits (203), Expect = 4e-14
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Frame = +3
Query: 3 GRGGRGYF--NNMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXX 176
GR GRG + NN P+CQ+C GH +C+YR + +F GP++
Sbjct: 271 GRHGRGSWKGNNKPQCQLCGRIGHVVMQCYYRFDQSFT----GPSQLQGNRPQGNMAHLH 326
Query: 177 XXXXXXFSPHVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAG 356
F P ++ E QD +WYPDSGAT+H+T ++N L S+F + V
Sbjct: 327 QQLSEXFFPGTPSVKPTTAEIIQDNNWYPDSGATHHLTPNLNNLLTKSQFPSSDEVFVGN 386
Query: 357 GSGIDIAHIGNSIVKSS 407
G G+ I HIG++ SS
Sbjct: 387 GKGLPIHHIGHTSFSSS 403
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/151 (29%), Positives = 71/151 (47%)
Frame = +3
Query: 6 RGGRGYFNNMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXXXX 185
RG + + P CQ+C+ GH A KC++R + N+VP
Sbjct: 236 RGNQQRVDPRPICQVCYKRGHVAAKCWHRFDENYVPDER--------------------- 274
Query: 186 XXXFSPHVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAGGSG 365
++A + D +WY DSGAT+H+T +++ L V ++ G E++ TA G G
Sbjct: 275 --------HVAAAAQAAYAVDTNWYIDSGATDHITSELDKLTVREKYKGTEKIHTANGVG 326
Query: 366 IDIAHIGNSIVKSSCNTHSHSFXXXXXXHVP 458
+ I HIG+++V + N H+ HVP
Sbjct: 327 MQIKHIGHALVHTPDN---HTLHLKNVLHVP 354
>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
Length = 955
Score = 80.5 bits (197), Expect = 2e-13
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Frame = +3
Query: 3 GRG-GRGYFNNMPRCQICHYNGHTADKCFYRANLNFVPGN---NGPNRGHFXXXXXXXXX 170
GRG GR P+CQ+C+ GHT +CFYR + NF GN NGP G
Sbjct: 171 GRGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNF-HGNMXANGPTPGVLGSGARNGAX 229
Query: 171 XXXXXXXXFSPHVNI---------------ANTSSTEPTQDLSWYPDSGATNHVTFDMNT 305
+ +VN+ A ++ E Q+ W+PDS ATNHVT D+
Sbjct: 230 GSISS----AGNVNLTEYDAQEDQDYSEMEAMVATXEDLQNCCWFPDSRATNHVTHDLGN 285
Query: 306 LNVASEFHGPERVQTAGGSGIDIAHIGNSIVKSSCNTHSHSF 431
LN +E++G ++ +G+ I+HIG S+ SS + + F
Sbjct: 286 LNSGAEYNGNSKIHMGNETGLKISHIGLSVFPSSSSPNKVFF 327
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 77.8 bits (190), Expect = 1e-12
Identities = 43/144 (29%), Positives = 72/144 (50%)
Frame = +3
Query: 27 NNMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXXXXXXXFSPH 206
++ PRCQ+C GHTA C+YR + N+VP
Sbjct: 277 SSRPRCQVCSRVGHTALNCWYRFDENYVPDQRS--------------------------- 309
Query: 207 VNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAGGSGIDIAHIG 386
AN+++ + ++ WY D+GAT+H+T D++ L + ++ G +++ A G+G+ I++IG
Sbjct: 310 ---ANSAAHQNGSNVPWYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGMTISNIG 366
Query: 387 NSIVKSSCNTHSHSFXXXXXXHVP 458
N+IV +S S S HVP
Sbjct: 367 NAIVPTS----SRSLHLRSVLHVP 386
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 77.4 bits (189), Expect = 2e-12
Identities = 52/146 (35%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Frame = +3
Query: 3 GRGGRGYF-----------NNMPRCQICHYNGHTADKCFYRANLNF-VPGN----NGPNR 134
GRG +G F N P CQ+C GH +C+YR + F VP N N R
Sbjct: 286 GRGNKGSFQARPPWNSDNQNEKPACQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNSSPR 345
Query: 135 GHFXXXXXXXXXXXXXXXXXFSPHVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNV 314
++ FSP VN +S E D +WYPDSGA+NHVT + L
Sbjct: 346 AYYS----------------FSPQVNGVIPTS-EVFSDDNWYPDSGASNHVTPNPENLMK 388
Query: 315 ASEFHGPERVQTAGGSGIDIAHIGNS 392
++EF G +V G+G+ I HIG S
Sbjct: 389 SAEFAGQNQVHVGNGTGLSIKHIGQS 414
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 76.3 bits (186), Expect = 4e-12
Identities = 40/129 (31%), Positives = 64/129 (49%)
Frame = +3
Query: 18 GYFNNMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXXXXXXXF 197
G +N P+CQ+C+ GHT C+YR + +FVP
Sbjct: 271 GGVDNRPKCQLCYKRGHTVINCWYRYDEDFVPDEKYAG---------------------- 308
Query: 198 SPHVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAGGSGIDIA 377
S+T D +WY D+ AT+HVT +++ L V + G ++V TA G+G++I+
Sbjct: 309 ---------SATSYGIDTNWYVDTSATDHVTGELDKLTVRDRYKGQDQVHTASGAGMEIS 359
Query: 378 HIGNSIVKS 404
HIG+S V++
Sbjct: 360 HIGHSTVRT 368
>gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 760
Score = 74.7 bits (182), Expect = 1e-11
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Frame = +3
Query: 6 RGGRGYFNNM--PRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXX 179
+GGRG NN P+CQ+C GHT KC+ R + +F
Sbjct: 187 QGGRGGANNQEWPKCQLCGKLGHTVIKCYKRFDTSFTGEEKA------------------ 228
Query: 180 XXXXXFSPHVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAGG 359
ANT++T D +WY D+GAT+H+T +++ L V ++ G E+V A G
Sbjct: 229 ------------ANTATTSYGIDTNWYVDTGATDHITGELDKLTVRDKYTGNEQVHAANG 276
Query: 360 SGIDIAHIGNSIVKSS 407
+G++I+HI ++ V S
Sbjct: 277 TGMEISHIDHATVPIS 292
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/145 (27%), Positives = 67/145 (46%)
Frame = +3
Query: 24 FNNMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXXXXXXXFSP 203
++N P CQ+C+ GH A C++R + +FVP +
Sbjct: 404 YDNRPLCQVCYKRGHVAADCWHRFDEDFVPDDK--------------------------- 436
Query: 204 HVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAGGSGIDIAHI 383
+ + +D +WY D+GAT+H+T ++ L + G +++ TA GSG++I HI
Sbjct: 437 ---LVAAAIHTHARDSNWYVDTGATDHITSELEKLTARDVYKGHDQIHTASGSGMEIKHI 493
Query: 384 GNSIVKSSCNTHSHSFXXXXXXHVP 458
G+SIV +T + HVP
Sbjct: 494 GHSIV----HTPTRPLHLNNVLHVP 514
>gb|ABA97279.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 297
Score = 72.0 bits (175), Expect = 8e-11
Identities = 40/132 (30%), Positives = 66/132 (50%)
Frame = +3
Query: 3 GRGGRGYFNNMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXXX 182
GR RG + P CQ+C G+ A C+YR + ++VP
Sbjct: 110 GRAPRGA-DKRPTCQVCFKRGYMATDCWYRYDEDYVPDPK-------------------- 148
Query: 183 XXXXFSPHVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAGGS 362
IA +++ D +WY D+GAT+H+ +++ L V +++G ER+ TA G+
Sbjct: 149 ---------YIAAAATSSYGVDANWYIDTGATDHIIGELDKLTVKEKYNGGERIHTASGT 199
Query: 363 GIDIAHIGNSIV 398
G+DI+HIG++ V
Sbjct: 200 GMDISHIGHTTV 211
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 71.2 bits (173), Expect = 1e-10
Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Frame = +3
Query: 3 GRGGRGYFNN--MPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXX 176
GRG G FNN P CQ+C GHT KC+ R + +F +
Sbjct: 179 GRGDDGSFNNNNRPTCQLCGKIGHTVHKCWKRFDASFTGEDKS----------------- 221
Query: 177 XXXXXXFSPHVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAG 356
AN +++ D +WY DSGAT+H+T +++ L V ++ G ++V TA
Sbjct: 222 -------------ANVAASSYEVDTNWYIDSGATDHITSELDKLTVKDKYAGNDQVHTAS 268
Query: 357 GSGIDIAHIGNSIVKSS 407
GSG +A IG S SS
Sbjct: 269 GSG--VAQIGGSATGSS 283
>ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255439 [Solanum
lycopersicum]
Length = 318
Score = 70.1 bits (170), Expect = 3e-10
Identities = 42/126 (33%), Positives = 57/126 (45%)
Frame = +3
Query: 27 NNMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXXXXXXXFSPH 206
+N P CQIC H A C+ R N + P N P
Sbjct: 209 SNRPLCQICEKLDHLAKNCYNRYNDQYPPTNTP------------------------RPQ 244
Query: 207 VNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAGGSGIDIAHIG 386
N+A +SS D SW DSGATNHVT D+ L++AS++ G + + GS + I H G
Sbjct: 245 ANVATSSSA--FLDPSWCLDSGATNHVTADVGNLSIASDYSGNDSLAVGNGSQLHITHFG 302
Query: 387 NSIVKS 404
+S + S
Sbjct: 303 SSSIPS 308
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 70.1 bits (170), Expect = 3e-10
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Frame = +3
Query: 3 GRGGRGYFNNM-----PRCQICHYNGHTADKCFYRANLNFVPG----NNGPNRGHFXXXX 155
GR G+G N P+CQ+C GHTA C++R +++F G ++ N G+
Sbjct: 271 GRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTISHSLNNGN----- 325
Query: 156 XXXXXXXXXXXXXFSPHVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGP 335
++ S++ D SWY DSGA++H+T ++ L S + G
Sbjct: 326 --------------QNNIPAMVASASNNPADESWYLDSGASHHLTQNLGNLTSTSPYTGT 371
Query: 336 ERVQTAGGSGIDIAHIGNSIVKSSCNTHSHSFXXXXXXHVP 458
++V G + I++IG+ ++H+HSF HVP
Sbjct: 372 DKVTIGNGKHLSISNIGS----KQLHSHTHSFRLKKVFHVP 408
>ref|XP_006605035.1| PREDICTED: uncharacterized protein LOC102664868 [Glycine max]
Length = 471
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/121 (29%), Positives = 58/121 (47%)
Frame = +3
Query: 36 PRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXXXXXXXFSPHVNI 215
P CQ+C GH A C+ R N P R S N+
Sbjct: 279 PICQLCSKPGHEAINCWQRTNQTDYPSRRANPR-------------------VSSRQANV 319
Query: 216 ANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAGGSGIDIAHIGNSI 395
A T ++ D SWY D+GAT+HVT D++ L +A+++ +++Q G + I+H+G+S+
Sbjct: 320 AQTGTSSIVMDPSWYFDTGATDHVTPDISKLTIANDYTDDDKLQVGNGKHLSISHVGSSL 379
Query: 396 V 398
+
Sbjct: 380 L 380
>emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]
Length = 1139
Score = 69.3 bits (168), Expect = 5e-10
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Frame = +3
Query: 3 GRGGRGYFNNM-----PRCQICHYNGHTADKCFYRANLNFVPG----NNGPNRGHFXXXX 155
GR G+G N P+CQ+C GHTA C++R +++F G ++ N G+
Sbjct: 242 GRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTTSHSLNNGN----- 296
Query: 156 XXXXXXXXXXXXXFSPHVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGP 335
++ S++ D SWY DSG ++H+T ++ L S + G
Sbjct: 297 --------------QNNIPTMVASASNSPADESWYLDSGTSHHLTQNLGNLTSTSLYTGT 342
Query: 336 ERVQTAGGSGIDIAHIGNSIVKSSCNTHSHSFXXXXXXHVP 458
+RV G + I++IG+ ++H+HSF HVP
Sbjct: 343 DRVTIGNGKHLSISNIGS----KQLHSHTHSFQLKKVFHVP 379
>emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera]
Length = 864
Score = 68.9 bits (167), Expect = 7e-10
Identities = 38/118 (32%), Positives = 57/118 (48%)
Frame = +3
Query: 27 NNMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXXXXXXXFSPH 206
N P+CQIC GH A CF+ NLN+ P P+ +F +
Sbjct: 193 NQKPQCQICGKFGHIALICFHXTNLNYSPQ---PSPKYFNTVLTTNSQLSNPPEFSYPAM 249
Query: 207 VNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAGGSGIDIAH 380
++A T +T P D +WY DSGAT+H T D+N L++ + F G ++V ++ H
Sbjct: 250 AHLAATHNTVP--DTNWYMDSGATHHFTLDINMLDIVTPFSGLDQVTVRNVKPFELIH 305
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
Length = 1087
Score = 68.9 bits (167), Expect = 7e-10
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Frame = +3
Query: 3 GRGGRGYFN-NMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXX 179
GRGGRG + + P CQ+C GHT C+ R + +F GN+
Sbjct: 246 GRGGRGRGDGSRPSCQLCGKEGHTVHTCWKRFDRSF-SGND------------------- 285
Query: 180 XXXXXFSPHVNIANTSSTEPTQ--DLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTA 353
F H A ++S + D +WY D+ AT+H+T ++ L +HG E+V A
Sbjct: 286 ---VIFQQHHQQAKSASAVSSYGVDTNWYLDTAATDHITGELKKLTTKERYHGNEQVHAA 342
Query: 354 GGSGIDIAHIGNSI 395
+G+ I+HIG +I
Sbjct: 343 NSAGMSISHIGRTI 356
>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
Length = 1131
Score = 68.9 bits (167), Expect = 7e-10
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Frame = +3
Query: 3 GRGGRGYFN-NMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXX 179
GRGGRG + + P CQ+C GHT C+ R + +F GN+
Sbjct: 246 GRGGRGRGDGSRPSCQLCGKEGHTVHTCWKRFDRSF-SGND------------------- 285
Query: 180 XXXXXFSPHVNIANTSSTEPTQ--DLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTA 353
F H A ++S + D +WY D+ AT+H+T ++ L +HG E+V A
Sbjct: 286 ---VIFQQHHQQAKSASAVSSYGVDTNWYLDTAATDHITGELKKLTTKERYHGNEQVHAA 342
Query: 354 GGSGIDIAHIGNSI 395
+G+ I+HIG +I
Sbjct: 343 NSAGMSISHIGRTI 356
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 68.6 bits (166), Expect = 8e-10
Identities = 44/152 (28%), Positives = 66/152 (43%)
Frame = +3
Query: 3 GRGGRGYFNNMPRCQICHYNGHTADKCFYRANLNFVPGNNGPNRGHFXXXXXXXXXXXXX 182
G GGR F P CQ+C GH C++ + +FVP
Sbjct: 264 GNGGRN-FKPRPTCQLCSKVGHVVADCWHCYDDSFVPD---------------------- 300
Query: 183 XXXXFSPHVNIANTSSTEPTQDLSWYPDSGATNHVTFDMNTLNVASEFHGPERVQTAGGS 362
+A +S D +WY D+GAT+H+T ++ L ++G E++ TA GS
Sbjct: 301 --------ARVAAAASYGV--DSNWYVDTGATDHITNELEKLTTRDRYNGKEQIHTASGS 350
Query: 363 GIDIAHIGNSIVKSSCNTHSHSFXXXXXXHVP 458
G+DI HIG S ++ T + + HVP
Sbjct: 351 GMDIKHIGQSTIR----TPTRNLYLRNILHVP 378