BLASTX nr result

ID: Rehmannia25_contig00029370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029370
         (413 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249968.1| PREDICTED: cytochrome c oxidase assembly pro...    69   8e-10
ref|XP_006361470.1| PREDICTED: cytochrome c oxidase assembly pro...    68   1e-09

>ref|XP_004249968.1| PREDICTED: cytochrome c oxidase assembly protein COX15-like
           [Solanum lycopersicum]
          Length = 475

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
 Frame = -2

Query: 337 MIESRLIVLLRKSKSLTHKFSSSNPKEWKT---FSAPCGLXXXXXXXXXXSFPRFNPAAK 167
           M+ESRLI LLRK+K L  K SS+  K   T    S               S P+  P+ +
Sbjct: 1   MLESRLISLLRKNKDLGVKISSNLGKWGFTATKISNEASFSTLNQYRLLSSLPKLAPSRR 60

Query: 166 TPVTRSCIGCGLRSLLQNNCKNFYKPPFKNFSTVASVSAKSTEGLKLLVTTGPHA 2
             V R+ +  GLRS  Q N K  ++  F+  STVA+ +A++ EGLK LV  GPHA
Sbjct: 61  NFVRRTFVNYGLRSFHQLNHKGVHRTSFRKISTVAASAAENKEGLKFLVIAGPHA 115


>ref|XP_006361470.1| PREDICTED: cytochrome c oxidase assembly protein COX15-like
           [Solanum tuberosum]
          Length = 475

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
 Frame = -2

Query: 337 MIESRLIVLLRKSKSLTHKFSSSNPKEWKT---FSAPCGLXXXXXXXXXXSFPRFNPAAK 167
           M+ESRLI LLR++K L  K SS+  K   T    S               S P+  P+++
Sbjct: 1   MLESRLISLLRQNKDLGVKISSNLGKWGFTAAKISNEASFSTLNQYRLLSSLPKLAPSSR 60

Query: 166 TPVTRSCIGCGLRSLLQNNCKNFYKPPFKNFSTVASVSAKSTEGLKLLVTTGPHA 2
             V R+ +  GLRS    N K  ++  F+  STVA+ +A++ EGLK LVT GPHA
Sbjct: 61  NFVRRTFVNYGLRSFHHLNHKGVHRTSFRKISTVAASAAENKEGLKFLVTAGPHA 115


Top