BLASTX nr result
ID: Rehmannia25_contig00029327
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00029327
(462 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN75996.1| hypothetical protein VITISV_022989 [Vitis vinifera] 91 2e-31
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 89 1e-30
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 82 5e-28
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 82 3e-27
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera] 83 4e-26
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 82 1e-25
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 83 2e-25
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 83 2e-25
ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa In... 88 2e-25
ref|YP_002000554.1| orf490 [Oryza sativa Japonica Group] gi|2349... 88 2e-25
ref|XP_006580846.1| PREDICTED: uncharacterized mitochondrial pro... 78 3e-25
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 82 1e-24
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 85 1e-24
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 80 2e-24
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat... 79 2e-24
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 81 2e-24
gb|AAB82754.1| retrofit [Oryza longistaminata] 82 3e-24
emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera] 83 3e-24
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 77 3e-24
gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Ja... 82 3e-24
>emb|CAN75996.1| hypothetical protein VITISV_022989 [Vitis vinifera]
Length = 274
Score = 90.9 bits (224), Expect(2) = 2e-31
Identities = 45/94 (47%), Positives = 65/94 (69%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L++ F+L DLG +++ LGIQV +TT+GL L QT+YI+DLL +A + ++ N+PM +
Sbjct: 106 LYKSFTLKDLGEVDYFLGIQVRHTTEGLYLSQTKYIKDLLCKAKMQFSESSNTPMTSGLK 165
Query: 189 LSNYEGQPIQYAYLYMQIVGALQYVTMTSPNITF 290
LS Y PI+ LY IVGALQYVT+T I++
Sbjct: 166 LSAYRSDPIENERLYRNIVGALQYVTITRLKISY 199
Score = 70.9 bits (172), Expect(2) = 2e-31
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
PL++HWKAVKRILRYL+GT GL + S N+ G+ DADWA+++DDKRS
Sbjct: 211 PLESHWKAVKRILRYLSGTLDYGLHLRRSSQLNLVGFCDADWATDLDDKRS 261
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 88.6 bits (218), Expect(2) = 1e-30
Identities = 46/91 (50%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Frame = +3
Query: 21 FSLTDLGRLNFLLGIQVTYTTDG-LILDQTRYIEDLLSRAGIDGAKGLNSPMITTTALSN 197
FSL DLG L++ LGI+V T DG L L Q +YI+DLL + +DGAK L +PM++ LS
Sbjct: 967 FSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSA 1026
Query: 198 YEGQPIQYAYLYMQIVGALQYVTMTSPNITF 290
G PI + Y +VGALQY+T+T P I F
Sbjct: 1027 GMGDPIDNVFEYRSVVGALQYITITRPEIAF 1057
Score = 70.1 bits (170), Expect(2) = 1e-30
Identities = 31/51 (60%), Positives = 37/51 (72%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
PLD HWKAVKRILRYL GT LG+ + N+ G+ DADW S+VDD+RS
Sbjct: 1069 PLDTHWKAVKRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRS 1119
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 82.0 bits (201), Expect(2) = 5e-28
Identities = 40/96 (41%), Positives = 60/96 (62%)
Frame = +3
Query: 3 TTLHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITT 182
T L+ F+L DLG +++ LGIQV +T+ G+ L Q +YI +LL + + K + +PM++
Sbjct: 1095 TQLNNQFALKDLGDIDYFLGIQVKHTSAGMHLSQAKYISNLLQKTKMLHVKSVPTPMVSN 1154
Query: 183 TALSNYEGQPIQYAYLYMQIVGALQYVTMTSPNITF 290
+LSN P LY VGALQY T+T P+IT+
Sbjct: 1155 QSLSNSGSAPFSNTQLYRSTVGALQYATITRPDITY 1190
Score = 68.2 bits (165), Expect(2) = 5e-28
Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSN--YNITGYVDADWASNVDDKRS 462
PL HWKAVKRILRYLAGT GL + SN NITG+ DADWAS+VDD+ S
Sbjct: 1202 PLTAHWKAVKRILRYLAGTLHHGLHLQHNSNSHLNITGFCDADWASDVDDRHS 1254
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 82.0 bits (201), Expect(2) = 3e-27
Identities = 41/94 (43%), Positives = 60/94 (63%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L+ FSL DLG +++ LGIQV++T +GL L QT+YI DLL + + K +P+ T
Sbjct: 1151 LNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLK 1210
Query: 189 LSNYEGQPIQYAYLYMQIVGALQYVTMTSPNITF 290
L +G P++ + Y VGALQYVT+T P ++F
Sbjct: 1211 LRVGDGDPVEDLHGYRSTVGALQYVTITRPELSF 1244
Score = 65.5 bits (158), Expect(2) = 3e-27
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P + HWK VKRILRYL GT GL + SN ++ G+ DADWAS++DD+RS
Sbjct: 1256 PTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRS 1306
>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
Length = 955
Score = 83.2 bits (204), Expect(2) = 4e-26
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +3
Query: 21 FSLTDLGRLNFLLGIQVTYTTDG--LILDQTRYIEDLLSRAGIDGAKGLNSPMITTTALS 194
F L DLG L++ LGI+V TT+G + + +YI+DLL + +DGAK L +PM++ LS
Sbjct: 758 FXLKDLGXLSYFLGIEVKKTTBGGLHLSXKKKYIQDLLKKTKMDGAKSLPTPMLSXLKLS 817
Query: 195 NYEGQPIQYAYLYMQIVGALQYVTMTSPNITF 290
G PI + Y +VGALQY+T+T P I F
Sbjct: 818 AGMGDPIDNVFXYRSVVGALQYITITRPEIAF 849
Score = 60.5 bits (145), Expect(2) = 4e-26
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKR 459
PLD HWKAVKRILRYL GT LG+ + N+ G+ DA+ S+V D+R
Sbjct: 861 PLDTHWKAVKRILRYLNGTXXLGIVLKPSETMNLVGFCDABXGSDVHDRR 910
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 82.0 bits (201), Expect(2) = 1e-25
Identities = 41/96 (42%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L++ F+L DLG L++ LGI+ T DG++L Q +Y++DLL R +D K +++P+ T
Sbjct: 1038 LNKSFALKDLGELHYFLGIEATKVCDGILLSQEKYVKDLLKRINMDKCKPVSTPLSPTEK 1097
Query: 189 LSNYEGQPI--QYAYLYMQIVGALQYVTMTSPNITF 290
LS ++G + A Y IVGALQY+T+T P+I+F
Sbjct: 1098 LSIHQGDVLGPNDATNYRSIVGALQYLTLTRPDISF 1133
Score = 60.1 bits (144), Expect(2) = 1e-25
Identities = 29/51 (56%), Positives = 35/51 (68%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P HW AVKRILRYL T LGLKI S+ ++G+ DADWA +DD+RS
Sbjct: 1145 PTTVHWAAVKRILRYLQQTSGLGLKIRKSSSLLVSGFSDADWAGCLDDRRS 1195
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 82.8 bits (203), Expect(2) = 2e-25
Identities = 41/90 (45%), Positives = 56/90 (62%)
Frame = +3
Query: 21 FSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTALSNY 200
F+L DLG+L+F LGI+V+Y + L QT+YI DLL R + K N+P LS +
Sbjct: 1106 FALRDLGQLSFFLGIEVSYNEGSMTLSQTKYISDLLHRTELFDTKPANTPGAVGKNLSKF 1165
Query: 201 EGQPIQYAYLYMQIVGALQYVTMTSPNITF 290
+G P+ Y +VGALQYVT+T P+I F
Sbjct: 1166 DGDPMTDVTHYRSVVGALQYVTLTRPDIAF 1195
Score = 58.9 bits (141), Expect(2) = 2e-25
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P HW +VKRILRYL GT GL + SN I G+ DADW +++DD+RS
Sbjct: 1207 PTTAHWLSVKRILRYLRGTMQDGLLFSPSSNLTIEGFTDADWGAHLDDRRS 1257
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 83.2 bits (204), Expect(2) = 2e-25
Identities = 44/94 (46%), Positives = 62/94 (65%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L Q F+L D G L++ LGI+V +DG+++ Q +Y DLL RAG+ K +++P+ TT
Sbjct: 1031 LKQEFALKDFGDLHYFLGIEVNKLSDGILVTQNKYALDLLKRAGMLDCKPVDTPLSTTEK 1090
Query: 189 LSNYEGQPIQYAYLYMQIVGALQYVTMTSPNITF 290
LS Y G IQ A Y IVGALQY+T+T P+ +F
Sbjct: 1091 LSAYTGS-IQDATRYRSIVGALQYLTLTRPDTSF 1123
Score = 58.5 bits (140), Expect(2) = 2e-25
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P HW AVKRILRY+ + LGLK+ + S+ I+ + DADWA +VDD+RS
Sbjct: 1135 PTMQHWMAVKRILRYVKSSVDLGLKLNSSSSTIISAFSDADWAGSVDDRRS 1185
>ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa Indica Group]
gi|289065044|ref|YP_003433855.1| hypothetical protein
OrrupM_p18 [Oryza rufipogon] gi|74100111|gb|AAZ99275.1|
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] gi|74100166|gb|AAZ99329.1| hypothetical
protein (mitochondrion) [Oryza sativa Japonica Group]
gi|74100220|gb|AAZ99382.1| hypothetical protein
(mitochondrion) [Oryza sativa Japonica Group]
gi|285026126|dbj|BAI67959.1| hypothetical protein [Oryza
rufipogon] gi|285026155|dbj|BAI67987.1| hypothetical
protein [Oryza sativa Indica Group]
gi|353685219|gb|AER12982.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|353685288|gb|AER13050.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277649|gb|AEZ03755.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277659|gb|AEZ03764.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|528540457|dbj|BAN67511.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
gi|528540460|dbj|BAN67513.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
Length = 490
Score = 88.2 bits (217), Expect(2) = 2e-25
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L + F+L DLG L++ LGI+V DG+IL Q +Y DLL R G+ G K +N+P+ TT
Sbjct: 199 LKEEFALKDLGALHYFLGIEVNKVHDGIILTQEKYATDLLKRVGMHGCKEINTPLSTTDK 258
Query: 189 LSNYEGQPI--QYAYLYMQIVGALQYVTMTSPNITF 290
L EG+P+ + + Y IVGALQY+T+T P+I F
Sbjct: 259 LLAKEGEPLGAEDSTRYRSIVGALQYLTLTRPDIAF 294
Score = 53.5 bits (127), Expect(2) = 2e-25
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P HW AVKRILRYL G+ LGL+I + ++ + DADWA DD++S
Sbjct: 306 PTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAFSDADWAGCPDDRKS 356
>ref|YP_002000554.1| orf490 [Oryza sativa Japonica Group] gi|23495377|dbj|BAC19858.1|
orf490 [Oryza sativa Japonica Group]
Length = 490
Score = 88.2 bits (217), Expect(2) = 2e-25
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L + F+L DLG L++ LGI+V DG+IL Q +Y DLL R G+ G K +N+P+ TT
Sbjct: 199 LKEEFALKDLGALHYFLGIEVNKVHDGIILTQEKYATDLLKRVGMHGCKEINTPLSTTDK 258
Query: 189 LSNYEGQPI--QYAYLYMQIVGALQYVTMTSPNITF 290
L EG+P+ + + Y IVGALQY+T+T P+I F
Sbjct: 259 LLAKEGEPLGAEDSTRYRSIVGALQYLTLTRPDIAF 294
Score = 53.5 bits (127), Expect(2) = 2e-25
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P HW AVKRILRYL G+ LGL+I + ++ + DADWA DD++S
Sbjct: 306 PTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAFSDADWAGCPDDRKS 356
>ref|XP_006580846.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 228
Score = 77.8 bits (190), Expect(2) = 3e-25
Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDG-LILDQTRYIEDLLSRAGIDGAKGLNSPMITTT 185
L+ FSL LG+L++ LGI+VT+ +G L+L Q++YI DLL++ + A G+ +PM+++
Sbjct: 26 LNDVFSLKQLGKLDYFLGIEVTHLPNGSLLLSQSKYITDLLAKVNMTSANGMPTPMVSSN 85
Query: 186 ALSNYEGQPIQYAYLYMQIVGALQYVTMTSPNITF 290
LS + + +VGALQY T+T P I+F
Sbjct: 86 KLSKIGSNEVDDPTQFRSVVGALQYATLTRPEISF 120
Score = 63.2 bits (152), Expect(2) = 3e-25
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 3/54 (5%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKI---TARSNYNITGYVDADWASNVDDKRS 462
PL+ HWKAVKRILRYL+GTK GL I + + ++ G+ DADWAS+ DD+RS
Sbjct: 132 PLEEHWKAVKRILRYLSGTKHHGLLIQPASLQQPLHLLGFCDADWASDPDDRRS 185
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 82.4 bits (202), Expect(2) = 1e-24
Identities = 39/96 (40%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L+Q F+L DLGRL++ LGI+V +G++L Q +Y D+L R + K +N+P+ +
Sbjct: 998 LNQEFALKDLGRLHYFLGIEVKELNNGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEK 1057
Query: 189 LSNYEGQPI--QYAYLYMQIVGALQYVTMTSPNITF 290
LS +EG P+ + + Y +VGALQY+T+T P+++F
Sbjct: 1058 LSAHEGNPLGPEDSTRYRSLVGALQYLTLTRPDLSF 1093
Score = 56.2 bits (134), Expect(2) = 1e-24
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P HW A KRILRYL T LGLKI+ ++ ++ + DADWA +DD+RS
Sbjct: 1105 PTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRRS 1155
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 84.7 bits (208), Expect(2) = 1e-24
Identities = 40/96 (41%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L+Q F+L DLGRL++ LGI+V DG++L Q +Y D+L R + K +N+P+ +
Sbjct: 736 LNQEFALKDLGRLHYFLGIEVKEVNDGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEK 795
Query: 189 LSNYEGQPI--QYAYLYMQIVGALQYVTMTSPNITF 290
LS +EG P+ + + Y +VGALQY+T+T P+++F
Sbjct: 796 LSAHEGNPLGPEDSTRYRSLVGALQYLTLTRPDLSF 831
Score = 53.9 bits (128), Expect(2) = 1e-24
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 322 HWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
HW A KRILRYL T LGLKI+ ++ ++ + DADWA +DD+RS
Sbjct: 847 HWVAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRRS 893
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 80.5 bits (197), Expect(2) = 2e-24
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L + F+L DLG L++ LGI+VT + G++L Q +Y+ DLL R + K +++P+ T+
Sbjct: 953 LQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEK 1012
Query: 189 LSNYEGQPI--QYAYLYMQIVGALQYVTMTSPNITF 290
LS EG P+ A Y +VGALQY+T+T P+I F
Sbjct: 1013 LSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAF 1048
Score = 57.8 bits (138), Expect(2) = 2e-24
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P +HW AVKRILRYL LGLK++ + ++ Y DADWA ++DD+RS
Sbjct: 1060 PTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRS 1110
>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
gi|31430072|gb|AAP52036.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1058
Score = 79.0 bits (193), Expect(2) = 2e-24
Identities = 37/97 (38%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Frame = +3
Query: 6 TLHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTT 185
+L + F+L DLG L++ LGI+V + ++L+Q RY +++ R ++ K + +P+ T
Sbjct: 756 SLEKEFALKDLGELHYFLGIEVKKASGNILLNQERYASEIVKRVSMENCKSVGTPLSTVE 815
Query: 186 ALSNYEGQPI--QYAYLYMQIVGALQYVTMTSPNITF 290
LS YEG+ + + A Y +VGALQY+T+T P+I+F
Sbjct: 816 KLSAYEGEKLGEKDATQYRSVVGALQYLTLTRPDISF 852
Score = 59.3 bits (142), Expect(2) = 2e-24
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P HW VKRILRY+ GT LGLK+ S+ ++ Y DADWA +DDKRS
Sbjct: 864 PTTVHWATVKRILRYVKGTLGLGLKVEKSSSNIVSAYSDADWADCLDDKRS 914
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 81.3 bits (199), Expect(2) = 2e-24
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L++ F+L DLG L++ LGI+VT +G++L Q +Y DLL R + K +++P+ +
Sbjct: 1142 LNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVSEK 1201
Query: 189 LSNYEGQPI--QYAYLYMQIVGALQYVTMTSPNITF 290
L+ YEG P+ A Y IVGALQY+T+T P+I +
Sbjct: 1202 LTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAY 1237
Score = 56.6 bits (135), Expect(2) = 2e-24
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P +HW AVKRILRYL LGL I ++ + GY DADWA +VDD++S
Sbjct: 1249 PTTDHWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKS 1299
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 82.4 bits (202), Expect(2) = 3e-24
Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L++ F+L DLG L++ LGI+VT ++G+IL Q +Y DLL R + K +++P+ +
Sbjct: 1151 LNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEK 1210
Query: 189 LSNYEGQPI--QYAYLYMQIVGALQYVTMTSPNITF 290
L+ YEG P+ A Y IVGALQY+T+T P+I +
Sbjct: 1211 LTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAY 1246
Score = 55.1 bits (131), Expect(2) = 3e-24
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P +HW AVKRILRYL LGL I ++ + GY DADWA ++DD++S
Sbjct: 1258 PTTSHWIAVKRILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSIDDRKS 1308
>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
Length = 1379
Score = 83.2 bits (204), Expect(2) = 3e-24
Identities = 41/92 (44%), Positives = 61/92 (66%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
LH F++ DLG L++ LG++V+Y DG L Q +Y D+L+RA + +K + +PMI +
Sbjct: 492 LHSEFAVKDLGPLSYFLGLEVSYIPDGFFLSQVKYATDILARAQLLDSKPVPTPMIVSQR 551
Query: 189 LSNYEGQPIQYAYLYMQIVGALQYVTMTSPNI 284
LS+ EG P LY +VGALQY+T+T PN+
Sbjct: 552 LSS-EGTPFADPTLYRSLVGALQYLTITRPNL 582
Score = 54.3 bits (129), Expect(2) = 3e-24
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P + H++AVKRILRY+ GT GLK T+ S+ + Y DADWA D +RS
Sbjct: 596 PTEVHFQAVKRILRYVQGTLHFGLKFTSCSSMGLVAYSDADWAGCPDTRRS 646
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 77.0 bits (188), Expect(2) = 3e-24
Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = +3
Query: 9 LHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTTA 188
L + F+L DLG L++ LGI+V + G++L Q +Y+ DLL R G+ K +++P+ T+
Sbjct: 962 LQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPLSTSEK 1021
Query: 189 LSNYEGQPI--QYAYLYMQIVGALQYVTMTSPNITF 290
L+ +EG + A Y +VGALQY+T+T P+I F
Sbjct: 1022 LTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYF 1057
Score = 60.5 bits (145), Expect(2) = 3e-24
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +1
Query: 322 HWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
HW A+KRILRYL LGLKI+ + ++GY DADWA N+DD+RS
Sbjct: 1073 HWAAMKRILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRS 1119
>gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1096
Score = 82.4 bits (202), Expect(2) = 3e-24
Identities = 39/97 (40%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Frame = +3
Query: 6 TLHQHFSLTDLGRLNFLLGIQVTYTTDGLILDQTRYIEDLLSRAGIDGAKGLNSPMITTT 185
+L+Q F+L DLG L++ LGI+V DG++L Q +Y +D+L R + K +N+P+ +
Sbjct: 802 SLNQEFALKDLGELHYFLGIEVKKVNDGIVLTQEKYAKDVLKRVNMSDCKAVNTPLSISE 861
Query: 186 ALSNYEGQPI--QYAYLYMQIVGALQYVTMTSPNITF 290
LS YEG P+ + Y +VGAL Y+T+T P+++F
Sbjct: 862 KLSAYEGTPLGPVDSTWYRSLVGALHYLTLTRPDLSF 898
Score = 55.1 bits (131), Expect(2) = 3e-24
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1
Query: 310 PLDNHWKAVKRILRYLAGTK*LGLKITARSNYNITGYVDADWASNVDDKRS 462
P HW A KRILRYL T LGLKI ++ ++ + DADWA +DD+RS
Sbjct: 910 PTTEHWAAAKRILRYLKHTVKLGLKIGKSNSLLVSAFSDADWAGCLDDRRS 960