BLASTX nr result

ID: Rehmannia25_contig00029308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029308
         (374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Sol...    59   5e-07
ref|XP_004305900.1| PREDICTED: F-box protein At5g07610-like [Fra...    56   4e-06

>ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Solanum tuberosum]
          Length = 403

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 45/98 (45%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
 Frame = -3

Query: 372 EMKRDYSEWFVKYQVDMTKVDELMNVISGGFSILSLVRVDVGKGGSFLVL--QGCGKVIR 199
           EMKRDYSEWFVKY+VD+    EL       F++LSLVR    +  +FLVL   G  K +R
Sbjct: 312 EMKRDYSEWFVKYKVDLEHPHELNYY---NFTVLSLVR-GRREEDAFLVLAIPGDCKAMR 367

Query: 198 YNLDCNTFEQISDIGNENHVVKRLLPCAFEHIVSLAGV 85
           YN+   TFE++ D    +  V  L   AFE+I SL  V
Sbjct: 368 YNIIEKTFEKLCDYEGADEQVYFL--NAFEYIESLCCV 403


>ref|XP_004305900.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
           vesca]
          Length = 414

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
 Frame = -3

Query: 372 EMKRDYSEWFVKYQVDMTKVDELMNVISGGFSILSLVRVDVGKGGSFLVLQGCGKVIRYN 193
           EM RDYS WFVKY VD+  +      I   F +L L +    + GS L+L  CGKV+ YN
Sbjct: 317 EMGRDYSGWFVKYTVDLDPLFTAYPWIQA-FVVLFLAKGQNEEEGSSLLLHDCGKVLSYN 375

Query: 192 LDCNTFEQIS-------------DIGNENHVVKRLLPC 118
           L  +TF+ I               +G  NH     L C
Sbjct: 376 LKSHTFKSIDLTPQAGVDDTSSLRVGQSNHRYMETLAC 413


Top