BLASTX nr result
ID: Rehmannia25_contig00029251
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00029251
(342 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006348495.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
gb|EPS72044.1| hypothetical protein M569_02714 [Genlisea aurea] 85 1e-14
ref|XP_002514156.1| pentatricopeptide repeat-containing protein,... 84 1e-14
ref|XP_004228900.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_004288922.1| PREDICTED: putative pentatricopeptide repeat... 81 1e-13
ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
gb|EMJ04554.1| hypothetical protein PRUPE_ppa020478mg [Prunus pe... 77 2e-12
ref|XP_006371982.1| hypothetical protein POPTR_0018s06910g [Popu... 73 4e-11
ref|XP_006475404.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
ref|XP_006451417.1| hypothetical protein CICLE_v10007442mg [Citr... 72 6e-11
ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat... 72 8e-11
ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat... 72 8e-11
gb|EOY12237.1| Pentatricopeptide repeat superfamily protein, put... 69 8e-10
emb|CBI27939.3| unnamed protein product [Vitis vinifera] 69 8e-10
ref|XP_004310131.1| PREDICTED: putative pentatricopeptide repeat... 60 3e-07
ref|XP_002309408.2| hypothetical protein POPTR_0006s22400g [Popu... 60 4e-07
gb|EPS68042.1| hypothetical protein M569_06731, partial [Genlise... 60 4e-07
gb|EEE54934.1| hypothetical protein OsJ_02489 [Oryza sativa Japo... 59 5e-07
gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indi... 59 5e-07
gb|EXB54618.1| hypothetical protein L484_019190 [Morus notabilis] 59 9e-07
>ref|XP_006348495.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like isoform X1 [Solanum tuberosum]
gi|565363546|ref|XP_006348496.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X2 [Solanum tuberosum]
gi|565363548|ref|XP_006348497.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X3 [Solanum tuberosum]
gi|565363550|ref|XP_006348498.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X4 [Solanum tuberosum]
gi|565363552|ref|XP_006348499.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X5 [Solanum tuberosum]
Length = 990
Score = 89.4 bits (220), Expect = 5e-16
Identities = 40/66 (60%), Positives = 52/66 (78%)
Frame = -3
Query: 199 KDKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRH 20
K +KW S ML+D AA++ L EGK +HG +IRSG EPD HLWVSLINFY+KCG+L F+ +
Sbjct: 110 KRGIKWYSEMLKDYAAKLCLKEGKALHGEMIRSGVEPDSHLWVSLINFYSKCGDLVFAEN 169
Query: 19 VFEQMP 2
VF+ +P
Sbjct: 170 VFDLIP 175
>gb|EPS72044.1| hypothetical protein M569_02714 [Genlisea aurea]
Length = 965
Score = 84.7 bits (208), Expect = 1e-14
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -3
Query: 205 NWKDKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFS 26
N + ++WCS LRDC+ +M + GK IH +IR+ EPD HLW+SLINFY+KCG L +
Sbjct: 79 NSRATVEWCSDKLRDCSLQMSTTRGKSIHCFVIRNEIEPDSHLWISLINFYSKCGYLRCA 138
Query: 25 RHVFEQMP 2
R VF++MP
Sbjct: 139 RQVFDKMP 146
>ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546612|gb|EEF48110.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 885
Score = 84.3 bits (207), Expect = 1e-14
Identities = 40/65 (61%), Positives = 48/65 (73%)
Frame = -3
Query: 199 KDKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRH 20
K+ LK SGMLR+CA++ L+EG IHG +I+SG EPD HLWVSLIN YAKCG L F+R
Sbjct: 90 KEVLKRYSGMLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARK 149
Query: 19 VFEQM 5
V M
Sbjct: 150 VLVGM 154
>ref|XP_004228900.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Solanum lycopersicum]
Length = 828
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/66 (56%), Positives = 50/66 (75%)
Frame = -3
Query: 199 KDKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRH 20
K +KW S M +D A ++ L EGK +HG +IRSG EPD +LWVSLINFY+KCG+L F+ +
Sbjct: 185 KRGIKWYSEMFKDYAGKLCLKEGKALHGEMIRSGVEPDSYLWVSLINFYSKCGDLVFAEN 244
Query: 19 VFEQMP 2
VF+ +P
Sbjct: 245 VFDLIP 250
>ref|XP_004288922.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Fragaria vesca subsp. vesca]
Length = 984
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = -3
Query: 199 KDKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRH 20
K +L SGMLR CA++ L+EGK IHG +I++G PDMHLWVSL+N Y+KCG+ ++R
Sbjct: 109 KKRLIQYSGMLRTCASQGALNEGKAIHGQVIKNGIHPDMHLWVSLVNVYSKCGDSLYARK 168
Query: 19 VFEQMP 2
V +MP
Sbjct: 169 VLGEMP 174
>ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = -3
Query: 199 KDKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRH 20
K +L+ SGMLR CA++ L+EGK IHG +I+SG PD HLW SL+N YAKCG ++
Sbjct: 125 KGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACK 184
Query: 19 VFEQMP 2
VF ++P
Sbjct: 185 VFGEIP 190
>gb|EMJ04554.1| hypothetical protein PRUPE_ppa020478mg [Prunus persica]
Length = 872
Score = 77.0 bits (188), Expect = 2e-12
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = -3
Query: 172 MLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRHVFEQMP 2
MLR C + L+EGK IHG +I++G +PD+HLWVSL+N YAKCG+ ++R V ++MP
Sbjct: 1 MLRTCVLQGSLNEGKAIHGQVIKNGIDPDLHLWVSLVNVYAKCGDCGYARKVLDEMP 57
>ref|XP_006371982.1| hypothetical protein POPTR_0018s06910g [Populus trichocarpa]
gi|550318228|gb|ERP49779.1| hypothetical protein
POPTR_0018s06910g [Populus trichocarpa]
Length = 872
Score = 72.8 bits (177), Expect = 4e-11
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = -3
Query: 172 MLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRHVFEQMP 2
MLR+CA++ + EGK IHG +I SG E D HLWVSLINFYAKC F+R V +MP
Sbjct: 1 MLRECASKGDVKEGKAIHGNLITSGVELDSHLWVSLINFYAKCRSRFFARKVLAEMP 57
>ref|XP_006475404.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Citrus sinensis]
Length = 849
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = -3
Query: 205 NWKDKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFS 26
++K +L+ S +L D AA+ L EGK+IHG +I+ G E D HLWVSLIN YAKCG + ++
Sbjct: 91 DYKKRLREYSSLLHDSAAKGSLKEGKLIHGHVIKCGLELDSHLWVSLINAYAKCGTVVYA 150
Query: 25 RHVFEQMP 2
+ V MP
Sbjct: 151 QRVLNIMP 158
>ref|XP_006451417.1| hypothetical protein CICLE_v10007442mg [Citrus clementina]
gi|567918824|ref|XP_006451418.1| hypothetical protein
CICLE_v10007442mg [Citrus clementina]
gi|567918826|ref|XP_006451419.1| hypothetical protein
CICLE_v10007442mg [Citrus clementina]
gi|567918828|ref|XP_006451420.1| hypothetical protein
CICLE_v10007442mg [Citrus clementina]
gi|567918830|ref|XP_006451421.1| hypothetical protein
CICLE_v10007442mg [Citrus clementina]
gi|567918832|ref|XP_006451422.1| hypothetical protein
CICLE_v10007442mg [Citrus clementina]
gi|557554643|gb|ESR64657.1| hypothetical protein
CICLE_v10007442mg [Citrus clementina]
gi|557554644|gb|ESR64658.1| hypothetical protein
CICLE_v10007442mg [Citrus clementina]
gi|557554645|gb|ESR64659.1| hypothetical protein
CICLE_v10007442mg [Citrus clementina]
gi|557554646|gb|ESR64660.1| hypothetical protein
CICLE_v10007442mg [Citrus clementina]
gi|557554647|gb|ESR64661.1| hypothetical protein
CICLE_v10007442mg [Citrus clementina]
gi|557554648|gb|ESR64662.1| hypothetical protein
CICLE_v10007442mg [Citrus clementina]
Length = 849
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = -3
Query: 205 NWKDKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFS 26
++K +L+ S +L D AA+ L EGK+IHG +I+ G E D HLWVSLIN YAKCG + ++
Sbjct: 91 DYKKRLREYSSLLHDSAAKGSLKEGKLIHGHVIKCGLELDSHLWVSLINAYAKCGTVVYA 150
Query: 25 RHVFEQMP 2
+ V MP
Sbjct: 151 QRVLNIMP 158
>ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/66 (50%), Positives = 43/66 (65%)
Frame = -3
Query: 199 KDKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRH 20
K KLK+ S MLR+CA++ L K IHG I++ PD HLWVSL+N YAKC ++R
Sbjct: 109 KKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARL 168
Query: 19 VFEQMP 2
V +MP
Sbjct: 169 VLAKMP 174
>ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/66 (50%), Positives = 43/66 (65%)
Frame = -3
Query: 199 KDKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRH 20
K KLK+ S MLR+CA++ L K IHG I++ PD HLWVSL+N YAKC ++R
Sbjct: 109 KKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARL 168
Query: 19 VFEQMP 2
V +MP
Sbjct: 169 VLAKMP 174
>gb|EOY12237.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 1067
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = -3
Query: 193 KLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRHVF 14
+LK S +L DCA++ L KV+HG I+ +G +PD+HLW SL+N YAKCG ++ V
Sbjct: 70 RLKLYSKILHDCASKGSLRLAKVVHGKIMENGLDPDLHLWNSLVNVYAKCGSFGYACKVL 129
Query: 13 EQMP 2
++MP
Sbjct: 130 DKMP 133
>emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 68.6 bits (166), Expect = 8e-10
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = -3
Query: 172 MLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRHVFEQMP 2
+L+ CA++ L+EGK IHG +I+SG PD HLW SL+N YAKCG ++ VF ++P
Sbjct: 197 ILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253
>ref|XP_004310131.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 733
Score = 60.1 bits (144), Expect = 3e-07
Identities = 23/59 (38%), Positives = 41/59 (69%)
Frame = -3
Query: 178 SGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRHVFEQMP 2
SG+L+ C L GK +HGC+I+S E D+++ +SL++ Y CG+++ +R VF+++P
Sbjct: 163 SGVLKACLGLKALDHGKCVHGCVIKSCYEKDLYVGISLLDLYTTCGDVDDARRVFQEVP 221
>ref|XP_002309408.2| hypothetical protein POPTR_0006s22400g [Populus trichocarpa]
gi|550336857|gb|EEE92931.2| hypothetical protein
POPTR_0006s22400g [Populus trichocarpa]
Length = 563
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = -3
Query: 172 MLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRHVFEQMP 2
+++ C+ E+RL EG+++HG IR G D+++ SLI+FY KC E+ +R VF+++P
Sbjct: 127 LIKVCSNELRLKEGEIVHGSAIRCGVSDDVYVGSSLISFYGKCKEILSARKVFDEIP 183
>gb|EPS68042.1| hypothetical protein M569_06731, partial [Genlisea aurea]
Length = 523
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = -3
Query: 172 MLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRHVFEQMP 2
+++ C L EG++IHG R G E D+ + SLI+FY KCGE+E +R VF++MP
Sbjct: 89 LVKACGRAGALREGRMIHGASFRCGAEADVFVGSSLIDFYGKCGEIESARKVFDEMP 145
>gb|EEE54934.1| hypothetical protein OsJ_02489 [Oryza sativa Japonica Group]
Length = 309
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = -3
Query: 196 DKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRHV 17
++L+ + L+ CAA L GK +H ++RSG PD L SL+N Y KCG L +R V
Sbjct: 58 EELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSV 117
Query: 16 FEQMP 2
F+ MP
Sbjct: 118 FDGMP 122
>gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = -3
Query: 196 DKLKWCSGMLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRHV 17
++L+ + L+ CAA L GK +H ++RSG PD L SL+N Y KCG L +R V
Sbjct: 58 EELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSV 117
Query: 16 FEQMP 2
F+ MP
Sbjct: 118 FDGMP 122
>gb|EXB54618.1| hypothetical protein L484_019190 [Morus notabilis]
Length = 553
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = -3
Query: 172 MLRDCAAEMRLSEGKVIHGCIIRSGTEPDMHLWVSLINFYAKCGELEFSRHVFEQMP 2
+++ CA E R+ EG+ +HG +R G E D+ + SLI+FY KCG++ +R +F++MP
Sbjct: 117 VIKACACEGRVREGRALHGSALRCGVEWDVFVRTSLIDFYGKCGKIGCARKMFDEMP 173