BLASTX nr result

ID: Rehmannia25_contig00029219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029219
         (368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]               58   1e-06
gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, pu...    55   1e-05
ref|XP_004300675.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    55   1e-05

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 7/127 (5%)
 Frame = +2

Query: 2   YKLEINAPALRYLKLQDSVSTHISAQMLASFIEADICFN-NYQDMDDNEYYTLRVLKFVD 178
           YKL ++AP L YL + D VS       L+S ++A +      + +DD   Y  R+ + + 
Sbjct: 186 YKLVVDAPNLEYLSITDFVSEDYLMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIYELLR 245

Query: 179 SLCNMKSLTLTSGKAFCDIA--FAQQRIPILRFDNLTKLELAADW----HFLLKFLESAE 340
            + N+K L+L SG+    ++  F    +P   F ++T+LEL  D+     FL +FL+++ 
Sbjct: 246 GISNVKHLSL-SGETLHSLSGMFCGYELP--AFHSVTRLELEVDYGYGLEFLKEFLDTSP 302

Query: 341 NLEVLII 361
           NLE+LI+
Sbjct: 303 NLEILIL 309


>gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, putative [Theobroma
           cacao]
          Length = 449

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
 Frame = +2

Query: 2   YKLEINAPALRYLKLQDSVSTHISAQMLASFIEADICFNNYQDMDDNEYYTLRVLKFVDS 181
           +KL+INAP L YL LQD++      + ++S +EA++  +  ++         R +  V +
Sbjct: 241 HKLKINAPILEYLNLQDNLPLEYDIENVSSLVEANVTVSFLEN---------RHIPLVKA 291

Query: 182 LCNMK----------SLTLTSGKAFCDIAFAQQRIPILRFDNLTKLELA---ADWHFLLK 322
           L N+K          SLTL S K F          P+  F NL +LEL+     W  + +
Sbjct: 292 LSNVKCLSINWDWYTSLTLGSCKTF----------PL--FLNLVRLELSIGCGGWSVVSR 339

Query: 323 FLESAENLEVLII 361
           FLE++ NLEVL++
Sbjct: 340 FLENSHNLEVLVL 352


>ref|XP_004300675.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78760-like
           [Fragaria vesca subsp. vesca]
          Length = 440

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
 Frame = +2

Query: 14  INAPALRYLKLQDSVSTHISAQMLASFIEADICFNNYQDMDDNEYYTLRVLKFVDSLCNM 193
           INAP L+ L + +   ++ + +   S IEA I     +D D +E    R  KF+  +  +
Sbjct: 227 INAPKLQKLDVSEGFLSNYTFKNTKSIIEASIEITTLKD-DKSEASADRATKFLAGISGV 285

Query: 194 KSLTLTSGKAFCDIAFAQQRIPILRFDNLTKLELAAD---WHFLLKFLESAENLEVLIIR 364
           K LTL+     C I       P+  FDNL++L L  D   W  L+KFLE + NLE  +I+
Sbjct: 286 KCLTLSPFSMACSI-------PV--FDNLSELMLLRDGQWWKILMKFLERSLNLESFVIK 336


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