BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00029005
         (962 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   568   e-160
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   568   e-160
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   565   e-159
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   560   e-157
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              557   e-156
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]          546   e-153
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   546   e-153
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   546   e-153
gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [...   540   e-151
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   535   e-150
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   534   e-149
ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   533   e-149
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise...   528   e-147
ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III s...   521   e-145
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s...   521   e-145
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus...   520   e-145
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr...   519   e-145
ref|XP_003606553.1| DNA-directed RNA polymerase [Medicago trunca...   518   e-144
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...   516   e-144
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor...   515   e-143

>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score =  568 bits (1465), Expect = e-160
 Identities = 276/316 (87%), Positives = 296/316 (93%)
 Frame = -3

Query: 948  RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 769
            +SL  W DLQMEVAQYINSDVRGVPL+M A RPLSGF QRLKGKQGRFRGNLSGKRVEYT
Sbjct: 301  KSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYT 360

Query: 768  GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 589
            GRTVISPDPNLKI +VAIPILMA+ILTYPERVS HNIEKLRQCVRNGPNKYPGAK+IR P
Sbjct: 361  GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP 420

Query: 588  DGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 409
            DG+ ISLM   RKRHADELK+G IVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT
Sbjct: 421  DGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 480

Query: 408  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 229
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDF
Sbjct: 481  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDF 540

Query: 228  LTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPH 49
            LTSS+LITRKDTFY+R+SFSL+CSYMGDA DP DLP+PA +KP ELWTGKQLF +LLRP+
Sbjct: 541  LTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRPY 600

Query: 48   AKMRVYLNLTLAEKNY 1
            +KMRVY+NLT+ EK+Y
Sbjct: 601  SKMRVYVNLTVTEKSY 616


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  568 bits (1465), Expect = e-160
 Identities = 276/316 (87%), Positives = 296/316 (93%)
 Frame = -3

Query: 948  RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 769
            +SL  W DLQMEVAQYINSDVRGVPL+M A RPLSGF QRLKGKQGRFRGNLSGKRVEYT
Sbjct: 301  KSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYT 360

Query: 768  GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 589
            GRTVISPDPNLKI +VAIPILMA+ILTYPERVS HNIEKLRQCVRNGPNKYPGAK+IR P
Sbjct: 361  GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP 420

Query: 588  DGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 409
            DG+ ISLM   RKRHADELK+G IVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT
Sbjct: 421  DGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 480

Query: 408  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 229
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDF
Sbjct: 481  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDF 540

Query: 228  LTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPH 49
            LTSS+LITRKDTFY+R+SFSL+CSYMGDA DP DLP+PA +KP ELWTGKQLF +LLRP+
Sbjct: 541  LTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRPY 600

Query: 48   AKMRVYLNLTLAEKNY 1
            +KMRVY+NLT+ EK+Y
Sbjct: 601  SKMRVYVNLTVTEKSY 616


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score =  565 bits (1456), Expect = e-159
 Identities = 275/316 (87%), Positives = 294/316 (93%)
 Frame = -3

Query: 948  RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 769
            +SL  W DLQMEVAQYINSDVRGVPL M   RPLSGF QRLKGKQGRFRGNLSGKRVEYT
Sbjct: 301  KSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFTQRLKGKQGRFRGNLSGKRVEYT 360

Query: 768  GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 589
            GRTVISPDPNLKI +VAIPILMA+ILTYPERVS HNIEKLRQCVRNGPNKYPGAK+IR P
Sbjct: 361  GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP 420

Query: 588  DGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 409
            DG  +SLM + RKR+ADELK+G IVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT
Sbjct: 421  DGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 480

Query: 408  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 229
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDF
Sbjct: 481  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDF 540

Query: 228  LTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPH 49
            LTSS+LITRKDTFY+R+SFSL+CSYMGDA DP DLP+PA +KP ELWTGKQLF VLLRP+
Sbjct: 541  LTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHVLLRPY 600

Query: 48   AKMRVYLNLTLAEKNY 1
            +KMRVY+NLTL EK+Y
Sbjct: 601  SKMRVYVNLTLTEKSY 616


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  560 bits (1442), Expect = e-157
 Identities = 272/317 (85%), Positives = 293/317 (92%)
 Frame = -3

Query: 951  NRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 772
            ++ L  WD LQ+EVAQYINSDVRGVPL M AARPLSGFVQRLKGKQGRFRGNLSGKRVEY
Sbjct: 303  SKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362

Query: 771  TGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQ 592
            TGRTVISPDPNLKI +VAIPILMA+IL+YPERVSHHNIEKLRQC+ NGP KYPGAK IR 
Sbjct: 363  TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422

Query: 591  PDGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 412
            PDG++ SLM + RKR ADELKYG IV+RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 423  PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482

Query: 411  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 232
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD
Sbjct: 483  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542

Query: 231  FLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRP 52
            FLTSS+LITRKDTFYDR++FSLMCSYMGD  D +DLPTPA++KP ELWTGKQLF+VLLRP
Sbjct: 543  FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRP 602

Query: 51   HAKMRVYLNLTLAEKNY 1
            HA +RVYLNLT+ EK Y
Sbjct: 603  HANVRVYLNLTVMEKTY 619


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  557 bits (1436), Expect = e-156
 Identities = 271/317 (85%), Positives = 292/317 (92%)
 Frame = -3

Query: 951  NRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 772
            ++ L  WD LQ+EVAQYINSDVRGVPL M AARPLSGFVQRLKGKQGRFRGNLSGKRVEY
Sbjct: 303  SKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362

Query: 771  TGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQ 592
            TGRTVISPDPNLKI +VAIPILMA+IL+YPERVSHHNIEKLRQC+ NGP KYPGAK IR 
Sbjct: 363  TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422

Query: 591  PDGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 412
            PDG++ SLM + RKR ADELKYG IV+RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 423  PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482

Query: 411  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 232
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD
Sbjct: 483  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542

Query: 231  FLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRP 52
            FLTSS+LITRKDTFYDR++FSLMCSYMGD  D +DLPTPA++K  ELWTGKQLF+VLLRP
Sbjct: 543  FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLRP 602

Query: 51   HAKMRVYLNLTLAEKNY 1
            HA +RVYLNLT+ EK Y
Sbjct: 603  HANVRVYLNLTVMEKTY 619


>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
          Length = 1395

 Score =  546 bits (1407), Expect = e-153
 Identities = 264/316 (83%), Positives = 288/316 (91%)
 Frame = -3

Query: 948  RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 769
            + L  W+ LQ+EVAQYINSDVRGVP  M  ++PLSGFVQR+KGK GRFRGNLSGKRVEYT
Sbjct: 301  KCLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFRGNLSGKRVEYT 360

Query: 768  GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 589
            GRTVISPDPNLKI +VAIPI MARILTYPERVS+HNIEKLRQCVRNGP+KYPGA+ +R P
Sbjct: 361  GRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVRYP 420

Query: 588  DGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 409
            DG+   L+ + RKR ADELK+GC+VDRHLEDGDIVLFNRQPSLHRMSIM HRARIMPWRT
Sbjct: 421  DGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRT 480

Query: 408  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 229
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF
Sbjct: 481  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 540

Query: 228  LTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPH 49
            LTSS+LITRKD FYDR++FSL+CSYMGD  D IDLPTPAL+KP ELWTGKQLFSVLLRPH
Sbjct: 541  LTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRPH 600

Query: 48   AKMRVYLNLTLAEKNY 1
            A +RVYLNL + E+NY
Sbjct: 601  ASVRVYLNLIVKERNY 616


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  546 bits (1406), Expect = e-153
 Identities = 264/316 (83%), Positives = 284/316 (89%)
 Frame = -3

Query: 948  RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 769
            +SL  W+ LQ+EVAQYINSDVRGVP  M  ARPLSGFVQRLKGKQGRFRGNLSGKRVEYT
Sbjct: 308  KSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 367

Query: 768  GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 589
            GRTVISPDPNLKI +VAIPI MARILTYPERVS HNIEKLRQC++NGP+KYPGA+ IR P
Sbjct: 368  GRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMIRYP 427

Query: 588  DGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 409
            DGT   L    R + A ELK GCIVDRHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRT
Sbjct: 428  DGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 487

Query: 408  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 229
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVASTQDF
Sbjct: 488  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDF 547

Query: 228  LTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPH 49
            LTSS+LITRKDTFYDR++FSLMC YMGD  D +DLPTPA++KP ELWTGKQLFSVL+RPH
Sbjct: 548  LTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLIRPH 607

Query: 48   AKMRVYLNLTLAEKNY 1
            A MRVY+NLT+ EK Y
Sbjct: 608  ANMRVYVNLTVKEKTY 623


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  546 bits (1406), Expect = e-153
 Identities = 264/316 (83%), Positives = 284/316 (89%)
 Frame = -3

Query: 948  RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 769
            +SL  W+ LQ+EVAQYINSDVRGVP  M  ARPLSGFVQRLKGKQGRFRGNLSGKRVEYT
Sbjct: 323  KSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 382

Query: 768  GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 589
            GRTVISPDPNLKI +VAIPI MARILTYPERVS HNIEKLRQC++NGP+KYPGA+ IR P
Sbjct: 383  GRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMIRYP 442

Query: 588  DGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 409
            DGT   L    R + A ELK GCIVDRHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRT
Sbjct: 443  DGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 502

Query: 408  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 229
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVASTQDF
Sbjct: 503  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDF 562

Query: 228  LTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPH 49
            LTSS+LITRKDTFYDR++FSLMC YMGD  D +DLPTPA++KP ELWTGKQLFSVL+RPH
Sbjct: 563  LTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLIRPH 622

Query: 48   AKMRVYLNLTLAEKNY 1
            A MRVY+NLT+ EK Y
Sbjct: 623  ANMRVYVNLTVKEKTY 638


>gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
          Length = 867

 Score =  540 bits (1392), Expect = e-151
 Identities = 261/316 (82%), Positives = 287/316 (90%)
 Frame = -3

Query: 948  RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 769
            + L SWD LQ+EVAQYINSD+RGVP  M  A+PLSGFVQRLKGK GRFRGNLSGKRVEYT
Sbjct: 311  KCLASWDILQVEVAQYINSDIRGVPFSMQTAKPLSGFVQRLKGKGGRFRGNLSGKRVEYT 370

Query: 768  GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 589
            GRTVISPDPNLKI +V +PI MA+ILTYPERVSHHNIEKLRQCV NGP+KYPGA+ +R P
Sbjct: 371  GRTVISPDPNLKITEVGVPIKMAQILTYPERVSHHNIEKLRQCVSNGPDKYPGARMLRNP 430

Query: 588  DGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 409
            DGT  SL  N RK  AD LKYG IV+RHLEDGDIVLFNRQPSLHRMSIM HRA++MPWRT
Sbjct: 431  DGTEWSLKVN-RKNAADGLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRAKVMPWRT 489

Query: 408  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 229
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+MLMGVQNNLCTPKNGE+LVASTQDF
Sbjct: 490  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMGVQNNLCTPKNGEVLVASTQDF 549

Query: 228  LTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPH 49
            LTSS+LITRKDTFYDR+SFSLMCSYMGD TDP+DLPTPA++KP ELWTGKQLFSVL+RP+
Sbjct: 550  LTSSFLITRKDTFYDRASFSLMCSYMGDGTDPVDLPTPAVIKPIELWTGKQLFSVLVRPN 609

Query: 48   AKMRVYLNLTLAEKNY 1
            + +RVYLN T+ EK+Y
Sbjct: 610  SNVRVYLNFTVNEKSY 625


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  535 bits (1379), Expect = e-150
 Identities = 259/320 (80%), Positives = 287/320 (89%)
 Frame = -3

Query: 960  NLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKR 781
            N   + L SWD LQ EVAQ INSDVRG+P  M  ++PL+GFVQRLKGKQGRFRGNL GKR
Sbjct: 296  NSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGKR 355

Query: 780  VEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKY 601
            VE+TGRTVISPDPNLKI +VA+PI MARILTYPERV+ HNIEKLRQCV NGP+KYPGA+ 
Sbjct: 356  VEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARM 415

Query: 600  IRQPDGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 421
            +R  DG++ SLM + RKR ADELKYG IV+RHLEDGD+VLFNRQPSLHRMSIM HR R+M
Sbjct: 416  LRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVM 475

Query: 420  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 241
            PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILVAS
Sbjct: 476  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAS 535

Query: 240  TQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVL 61
            TQDFLTSS+LITRKDTFYDR++FSLMCSYMGD  D +DLPTPALVKP ELWTGKQLFSVL
Sbjct: 536  TQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVL 595

Query: 60   LRPHAKMRVYLNLTLAEKNY 1
            +RPHA M+VYLNLT+ EK+Y
Sbjct: 596  VRPHASMKVYLNLTVKEKSY 615


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score =  534 bits (1375), Expect = e-149
 Identities = 257/317 (81%), Positives = 286/317 (90%)
 Frame = -3

Query: 951  NRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 772
            ++ L  WD LQ EVAQ+INSDVRG+P YM   + L+GFVQRLKGK GRFRGNLSGKRVEY
Sbjct: 302  SKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGKHGRFRGNLSGKRVEY 361

Query: 771  TGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQ 592
            TGRTVISPDPNLKI++VAIPI MARILTYPERV+HHNIEKLRQCVRNGP+KYPGA+ +R+
Sbjct: 362  TGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRR 421

Query: 591  PDGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 412
              G   SL    RKR ADEL+ G IVDRHLEDGDIVLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 422  DGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWR 481

Query: 411  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 232
            TLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGV+NNLCTPKNGEILVASTQD
Sbjct: 482  TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEILVASTQD 541

Query: 231  FLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRP 52
            FLTSS+LITRKDTFYDRS+FSL+CSY+GD  DPIDLPTPA+VKP ELW+GKQLFS++LRP
Sbjct: 542  FLTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQLFSIILRP 601

Query: 51   HAKMRVYLNLTLAEKNY 1
            HA MRVY+NLT+ E+NY
Sbjct: 602  HANMRVYVNLTVKERNY 618


>ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit rpc1-like, partial [Cucumis sativus]
          Length = 693

 Score =  533 bits (1373), Expect = e-149
 Identities = 257/312 (82%), Positives = 284/312 (91%)
 Frame = -3

Query: 936 SWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTV 757
           SWD LQ EVAQ INSDVRG+P  M  ++PL+GFVQRLKGKQGRFRGNL GKRVE+TGRTV
Sbjct: 2   SWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFTGRTV 61

Query: 756 ISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQPDGTL 577
           ISPDPNLKI +VA+PI MARILTYPERV+ HNIEKLRQCV NGP+KYPGA+ +R  DG++
Sbjct: 62  ISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHLDGSM 121

Query: 576 ISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFN 397
            SLM + RKR ADELKYG IV+RHLEDGD+VLFNRQPSLHRMSIM HR R+MPWRTLRFN
Sbjct: 122 RSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFN 181

Query: 396 ESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS 217
           ESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSS
Sbjct: 182 ESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS 241

Query: 216 YLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMR 37
           +LITRKDTFYDR++FSLMCSYMGD  D +DLPTPALVKP ELWTGKQLFSVL+RPHA M+
Sbjct: 242 FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMK 301

Query: 36  VYLNLTLAEKNY 1
           VYLNLT+ EK+Y
Sbjct: 302 VYLNLTVKEKSY 313


>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
          Length = 1368

 Score =  528 bits (1360), Expect = e-147
 Identities = 254/321 (79%), Positives = 289/321 (90%), Gaps = 1/321 (0%)
 Frame = -3

Query: 960  NLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMT-AARPLSGFVQRLKGKQGRFRGNLSGK 784
            N++ + +TSW+ LQ+EVAQYINSD RG+PLY   +++PLSGFVQRLKGKQGRFRGNLSGK
Sbjct: 292  NIYKKGVTSWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSGK 351

Query: 783  RVEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 604
            RVEYTGRTVISPDPNLKI +VA+PILMA+ILTYPERVSH NI +LR+CVR GPN+YPGAK
Sbjct: 352  RVEYTGRTVISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGAK 411

Query: 603  YIRQPDGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 424
            +IRQPDGT ISL  + RK HAD LKYG IVDRHL+DGDIVLFNRQPSLHRMSIM HRARI
Sbjct: 412  FIRQPDGTEISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRARI 471

Query: 423  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 244
            MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEE+R EA+MLMGVQNNLCTPKNGE+LVA
Sbjct: 472  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEESRAEAIMLMGVQNNLCTPKNGEVLVA 531

Query: 243  STQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSV 64
            STQDFLTSS+LITRKDTFYDRS+FSL+C+++ D    +DLP PA+VKP ELWTGKQ+FSV
Sbjct: 532  STQDFLTSSFLITRKDTFYDRSAFSLICAFVSDGLGTVDLPMPAVVKPVELWTGKQIFSV 591

Query: 63   LLRPHAKMRVYLNLTLAEKNY 1
            LLRP    +V++NLT+AEK Y
Sbjct: 592  LLRPDKDRKVFVNLTVAEKIY 612


>ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Cicer arietinum]
          Length = 1291

 Score =  521 bits (1343), Expect = e-145
 Identities = 251/308 (81%), Positives = 280/308 (90%)
 Frame = -3

Query: 924  LQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPD 745
            LQ  VAQYINSDV+G P  M A++PL+GFVQR+KGKQGRFR NLSGKRVEYTGRTVISPD
Sbjct: 201  LQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKGKQGRFRSNLSGKRVEYTGRTVISPD 260

Query: 744  PNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQPDGTLISLM 565
            PNLKI +VAIPI MARILTYPERV+HHNIEKLRQC+RNGP+KYPGAK +R   GT  +L 
Sbjct: 261  PNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLLRHAGGTTWNLK 320

Query: 564  NNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVC 385
             + RKR ADEL++G IVDRHLEDGD+VLFNRQPSLHRMS+M HRARIMPWRTLRFNESVC
Sbjct: 321  VSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMPWRTLRFNESVC 380

Query: 384  NPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLIT 205
            NPYNADFDGDEMN+HVPQTEEARTEAL+LM VQNNLCTPKNGEILVASTQDFLTSS+LIT
Sbjct: 381  NPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVASTQDFLTSSFLIT 440

Query: 204  RKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLN 25
            RKDTFYDRS+FSL+CSYMGD  DPIDLPTPA++KP ELW+GKQLFS+LLRPHA +RVY+N
Sbjct: 441  RKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILLRPHANVRVYVN 500

Query: 24   LTLAEKNY 1
            LT+ EK +
Sbjct: 501  LTVKEKTH 508


>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Cicer arietinum]
          Length = 1399

 Score =  521 bits (1343), Expect = e-145
 Identities = 251/308 (81%), Positives = 280/308 (90%)
 Frame = -3

Query: 924  LQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPD 745
            LQ  VAQYINSDV+G P  M A++PL+GFVQR+KGKQGRFR NLSGKRVEYTGRTVISPD
Sbjct: 309  LQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKGKQGRFRSNLSGKRVEYTGRTVISPD 368

Query: 744  PNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQPDGTLISLM 565
            PNLKI +VAIPI MARILTYPERV+HHNIEKLRQC+RNGP+KYPGAK +R   GT  +L 
Sbjct: 369  PNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLLRHAGGTTWNLK 428

Query: 564  NNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVC 385
             + RKR ADEL++G IVDRHLEDGD+VLFNRQPSLHRMS+M HRARIMPWRTLRFNESVC
Sbjct: 429  VSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMPWRTLRFNESVC 488

Query: 384  NPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLIT 205
            NPYNADFDGDEMN+HVPQTEEARTEAL+LM VQNNLCTPKNGEILVASTQDFLTSS+LIT
Sbjct: 489  NPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVASTQDFLTSSFLIT 548

Query: 204  RKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLN 25
            RKDTFYDRS+FSL+CSYMGD  DPIDLPTPA++KP ELW+GKQLFS+LLRPHA +RVY+N
Sbjct: 549  RKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILLRPHANVRVYVN 608

Query: 24   LTLAEKNY 1
            LT+ EK +
Sbjct: 609  LTVKEKTH 616


>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
          Length = 1392

 Score =  520 bits (1340), Expect = e-145
 Identities = 250/320 (78%), Positives = 286/320 (89%)
 Frame = -3

Query: 960  NLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKR 781
            ++ ++ L  W+ LQ EVAQ+INS+VRG+P YM + + L+GFVQRLKGK GRFRGNLSGKR
Sbjct: 299  SVSSKFLDGWEILQNEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKGKHGRFRGNLSGKR 358

Query: 780  VEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKY 601
            VEYTGRTVISPDPNLKI++VAIPILMA ILTYPERV+HHNIEKLRQCVRNGP+KYPGA+ 
Sbjct: 359  VEYTGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGARM 418

Query: 600  IRQPDGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 421
            +R+  G   SL    RKR ADEL+ G IVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM
Sbjct: 419  LRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 478

Query: 420  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 241
            PWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCTPKNGEILVAS
Sbjct: 479  PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAS 538

Query: 240  TQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVL 61
            TQDFLTSS+L+TRKDTFYDRS+F+ +C+++GD  D IDLPTPA+VKP ELW+GKQLFS+L
Sbjct: 539  TQDFLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGKQLFSLL 598

Query: 60   LRPHAKMRVYLNLTLAEKNY 1
            LRPHA  +VY+NLT+ EK Y
Sbjct: 599  LRPHANFKVYVNLTVKEKTY 618


>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
            gi|557101978|gb|ESQ42341.1| hypothetical protein
            EUTSA_v10012446mg [Eutrema salsugineum]
          Length = 1375

 Score =  519 bits (1336), Expect = e-145
 Identities = 251/316 (79%), Positives = 281/316 (88%)
 Frame = -3

Query: 948  RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 769
            +++  WD +Q EVAQYINS+VRG+P     ++PLSG +QRLKGKQGRFR NLSGKRVEYT
Sbjct: 308  KNMQVWDTVQSEVAQYINSEVRGIP-NQPDSKPLSGILQRLKGKQGRFRANLSGKRVEYT 366

Query: 768  GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 589
            GRTVISPDPNLKI +V IPILMARILT+PE VS HNIEKLRQCVRNGPNKYPGA+ +R P
Sbjct: 367  GRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARSVRYP 426

Query: 588  DGTLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 409
            DG+  +L+ + RKR ADEL  GCIVDRHLE+GD VLFNRQPSLHRMSIM HRARIMPWRT
Sbjct: 427  DGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPWRT 486

Query: 408  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 229
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVASTQDF
Sbjct: 487  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQDF 546

Query: 228  LTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPH 49
            LTSSYLITRKDTFYDR++FSL+CSYMGDA D IDLPTP ++KP ELWTGKQ+FSVLLRP+
Sbjct: 547  LTSSYLITRKDTFYDRAAFSLICSYMGDAMDAIDLPTPTILKPIELWTGKQVFSVLLRPN 606

Query: 48   AKMRVYLNLTLAEKNY 1
            A +RVY+ L + EKN+
Sbjct: 607  ASVRVYVTLNVKEKNF 622


>ref|XP_003606553.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355507608|gb|AES88750.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 807

 Score =  518 bits (1333), Expect = e-144
 Identities = 247/308 (80%), Positives = 279/308 (90%)
 Frame = -3

Query: 924 LQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPD 745
           LQ EVAQYINSDV+G P     ++ L+GF+QR+KGKQGRFR NLSGKRVEYTGRTVISPD
Sbjct: 71  LQFEVAQYINSDVKGGPYNPQMSKSLTGFIQRIKGKQGRFRSNLSGKRVEYTGRTVISPD 130

Query: 744 PNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQPDGTLISLM 565
           PNLKI +VAIPI MARILTYPERV+HHNIEKLRQCVRNGP+KYPGA+ +++  G   +L 
Sbjct: 131 PNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLKEAGGNSWNLR 190

Query: 564 NNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVC 385
            + R R ADELK+G IV+RH+EDGDIV+FNRQPSLHRMS+MSHRAR+MPWRTLRFNESVC
Sbjct: 191 VSSRTRRADELKFGDIVERHIEDGDIVIFNRQPSLHRMSMMSHRARVMPWRTLRFNESVC 250

Query: 384 NPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLIT 205
           NPYNADFDGDEMN+HVPQTEEARTEAL+LM VQNNLCTPKNGEILVASTQDFLTSS+LIT
Sbjct: 251 NPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVASTQDFLTSSFLIT 310

Query: 204 RKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLN 25
           RKDTFYDRSSFSL+CSYMGD  DPIDLPTPA++KP ELW+GKQLFS+LLRPHA +RVY+N
Sbjct: 311 RKDTFYDRSSFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILLRPHANVRVYVN 370

Query: 24  LTLAEKNY 1
           LT+ EKNY
Sbjct: 371 LTVKEKNY 378


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score =  516 bits (1330), Expect = e-144
 Identities = 253/314 (80%), Positives = 274/314 (87%)
 Frame = -3

Query: 942  LTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGR 763
            L  WD+LQ  V  YINSDVR +PL M   RPLSGFVQRL GKQGRFR NL+GKRVE+TGR
Sbjct: 309  LIGWDELQAVVTLYINSDVR-IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEFTGR 367

Query: 762  TVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQPDG 583
            TVISPDPNLKI +VAIPI MARILTYPERV+HHNIEKLRQCV NG  KYPGA+ +  PDG
Sbjct: 368  TVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTYPDG 427

Query: 582  TLISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLR 403
            +   L  N RKR A+ELK GCIV RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLR
Sbjct: 428  SSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 487

Query: 402  FNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 223
            FNESVCNPYNADFDGDEMNMHVPQTEEARTEA +LMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 488  FNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVASTQDFLT 547

Query: 222  SSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAK 43
            SS+LITRKDTFYDR++FSLMCSYM D  D +DLPTP+++KP ELWTGKQLFSVLLRPHA 
Sbjct: 548  SSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVLLRPHAN 607

Query: 42   MRVYLNLTLAEKNY 1
            +RVY+NL L EKNY
Sbjct: 608  VRVYVNLILKEKNY 621


>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
          Length = 1179

 Score =  515 bits (1326), Expect = e-143
 Identities = 255/327 (77%), Positives = 283/327 (86%), Gaps = 13/327 (3%)
 Frame = -3

Query: 942  LTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGR 763
            L +WD LQ  VA YINSDVRG+P      +  SGF+QRLKGKQGRFRGNLSGKRVEYTGR
Sbjct: 75   LENWDALQAHVALYINSDVRGIPPPKPGEKQYSGFIQRLKGKQGRFRGNLSGKRVEYTGR 134

Query: 762  TVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQPDG 583
            TVISPDPNLKI +VAIPI MARILTYPERVSHHNIEKLRQCV NGP+KYPGA+ +R+ DG
Sbjct: 135  TVISPDPNLKITEVAIPIRMARILTYPERVSHHNIEKLRQCVSNGPDKYPGARMLRRADG 194

Query: 582  TL-------------ISLMNNLRKRHADELKYGCIVDRHLEDGDIVLFNRQPSLHRMSIM 442
            +              +S+  + RKR ADELKYG IV+RHLEDGDIVLFNRQPSLHRMSIM
Sbjct: 195  STWQGLICFYYLCGHVSIRVS-RKRLADELKYGDIVERHLEDGDIVLFNRQPSLHRMSIM 253

Query: 441  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 262
             HRAR+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKN
Sbjct: 254  CHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKN 313

Query: 261  GEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTG 82
            GEILVASTQDFLTSS+LITRKDTFYDR++FSLMCSYMGDA +  DLPTPA++KP ELWTG
Sbjct: 314  GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDAMEHNDLPTPAVIKPVELWTG 373

Query: 81   KQLFSVLLRPHAKMRVYLNLTLAEKNY 1
            KQLFSVL+RP+A +RV+LNLT+ EKNY
Sbjct: 374  KQLFSVLVRPNANVRVFLNLTVREKNY 400