BLASTX nr result

ID: Rehmannia25_contig00028806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00028806
         (392 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004244328.1| PREDICTED: uncharacterized protein LOC101258...    47   3e-06
ref|XP_006346074.1| PREDICTED: uncharacterized protein LOC102592...    47   3e-06

>ref|XP_004244328.1| PREDICTED: uncharacterized protein LOC101258676 [Solanum
           lycopersicum]
          Length = 966

 Score = 47.4 bits (111), Expect(2) = 3e-06
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -1

Query: 113 VFCATVLQQINGNRSFLASRMLQVGARFAPSPIPI 9
           VFC  +LQQ N +R  +ASRMLQVGA FAP+PI +
Sbjct: 663 VFCTALLQQSNDSRDSVASRMLQVGAWFAPAPISV 697



 Score = 29.3 bits (64), Expect(2) = 3e-06
 Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = -3

Query: 300 EFLGRFYEKLGRLSF--WHMGGLFSFLNLQLCHLLYMRT*FRSI*RNRWLSSLSIADQQL 127
           EFL +F EKLGR SF  W +G L S L + L   L+       +      S+LSI  QQ 
Sbjct: 593 EFLHKFDEKLGRSSFGLWVVGSLLSELAI-LPSALFEAVNQVPVEETASCSNLSIPHQQF 651

Query: 126 FR 121
            R
Sbjct: 652 CR 653


>ref|XP_006346074.1| PREDICTED: uncharacterized protein LOC102592557 [Solanum tuberosum]
          Length = 969

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 21/35 (60%), Positives = 28/35 (80%)
 Frame = -1

Query: 113 VFCATVLQQINGNRSFLASRMLQVGARFAPSPIPI 9
           +FC T+LQQ + +R  +ASRMLQVGA FAP+PI +
Sbjct: 666 IFCTTLLQQSSDSRDSVASRMLQVGAWFAPAPISV 700



 Score = 29.3 bits (64), Expect(2) = 3e-06
 Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -3

Query: 300 EFLGRFYEKLGRLSF--WHMGGLFSFLNLQLCHLLYMRT*FRSI*RNRWLSSLSIADQQL 127
           EFL +F EKLGR SF  W +G L S L + L   L+       +      S+LSI  QQ 
Sbjct: 596 EFLHKFDEKLGRSSFGLWVVGSLLSELAI-LPSALFEDVNQVPVEETTSCSNLSIPHQQF 654

Query: 126 FRIISLLCNCL 94
            R    L   L
Sbjct: 655 CRTNPFLMKTL 665


Top