BLASTX nr result

ID: Rehmannia25_contig00028768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00028768
         (502 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB36805.1| hypothetical protein L484_007867 [Morus notabilis]      67   3e-09
ref|XP_002887399.1| hypothetical protein ARALYDRAFT_476317 [Arab...    57   3e-06
ref|XP_002862882.1| predicted protein [Arabidopsis lyrata subsp....    57   3e-06

>gb|EXB36805.1| hypothetical protein L484_007867 [Morus notabilis]
          Length = 179

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
 Frame = +2

Query: 86  STTEEFSFPVVTSISSNNVVHLKTLPPLWRISSINYADDADYLEHQN---GHHVIRKRNI 256
           + TE+FSFP +T+ + +N+ +  +L  LWRISS+ Y D  +  E ++    + V+RK   
Sbjct: 2   ANTEDFSFPKLTNTNKDNINNYYSLS-LWRISSLVYPDQEEEEEEEDKEEDYGVVRKHK- 59

Query: 257 FTSFSHVELGDNTMDSEKDGNFTQGQEKMDVLWEDFNEELLQDMSNNNNTI 409
             SFS +E+GD+             + +MD+LWEDFNE+ LQ +S+ +N I
Sbjct: 60  --SFSEIEVGDS-------------ETRMDLLWEDFNEKELQRVSSLDNRI 95


>ref|XP_002887399.1| hypothetical protein ARALYDRAFT_476317 [Arabidopsis lyrata subsp.
           lyrata] gi|297333240|gb|EFH63658.1| hypothetical protein
           ARALYDRAFT_476317 [Arabidopsis lyrata subsp. lyrata]
          Length = 173

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
 Frame = +2

Query: 83  SSTTEEFSFPVVTSISSNNVVHLKTL--PPLWRISSINYADDADY-------LEHQNGHH 235
           S ++EEFSFP   S++S++  H   L  PPLW+ S +N     DY       L  ++  H
Sbjct: 5   SVSSEEFSFP---SLASHDPSHHSGLDSPPLWKHSPVNSFRRKDYDFGLARLLIGKDDDH 61

Query: 236 VIRKRNIFTSFSHVELGDNTMDSEKDGNFTQGQEKMDVLWEDFNEEL 376
             RK     SFS+VE+    MD +++       EKMD+LWED NEEL
Sbjct: 62  DQRK-----SFSYVEMRSRWMDDKEE-------EKMDMLWEDLNEEL 96


>ref|XP_002862882.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297308645|gb|EFH39141.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 110

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
 Frame = +2

Query: 83  SSTTEEFSFPVVTSISSNNVVHLKTL--PPLWRISSINYADDADY-------LEHQNGHH 235
           S ++EEFSFP   S++S++  H   L  PPLW+ S +N     DY       L  ++  H
Sbjct: 5   SVSSEEFSFP---SLASHDPSHHSGLDSPPLWKHSPVNSFRRKDYDFGLARLLIGKDDDH 61

Query: 236 VIRKRNIFTSFSHVELGDNTMDSEKDGNFTQGQEKMDVLWEDFNEEL 376
             RK     SFS+VE+    MD +++       EKMD+LWED NEEL
Sbjct: 62  DQRK-----SFSYVEMRSRWMDDKEE-------EKMDMLWEDLNEEL 96


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