BLASTX nr result

ID: Rehmannia25_contig00028668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00028668
         (515 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]                60   2e-07
emb|CAN76580.1| hypothetical protein VITISV_025642 [Vitis vinifera]    58   1e-06

>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
 Frame = +2

Query: 2    LADNEAKWLKYFLANIPWCSKPTPSMFMHADCQTAIA---NYEE*KK*****YSSEMWFD 172
            +A +EA+WLK FLANIP   KPTPS+ MH DCQ+AIA   N     K      +  +   
Sbjct: 1177 MAGSEAEWLKNFLANIPLGMKPTPSVSMHCDCQSAIAIAKNKSYNGK------NRHIQLR 1230

Query: 173  QTTVERW--SNIH*LCEVRSEFGQSSD*TS--GKKLIVETSRGMRLKPI 307
               V++   S    +  V+SE   +   T   G+K+I+ETSRGM LKP+
Sbjct: 1231 HNLVKQLLKSGTISIDYVKSERDLADPLTKPLGRKMILETSRGMGLKPL 1279


>emb|CAN76580.1| hypothetical protein VITISV_025642 [Vitis vinifera]
          Length = 1046

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
 Frame = +2

Query: 14   EAKWLKYFLANIPWCSKPTPSMFMHADCQTAIANYEE*KK*****YSSEMWFDQTTVERW 193
            EA+WL+  LA+IP   +PTPS+FM  D QT IA  +           S+++  +    R 
Sbjct: 947  EAEWLRNLLADIPLWMRPTPSVFMRCDSQTTIAKAK-----------SKIFNGKNKHIRL 995

Query: 194  SN--IH*LCEVRSEFGQSSD*TSGKKLIVETSRGMRLKPIQEINSDRNPT 337
             +  +  L E R            KKL+ ETSR M L PI E+ S  NPT
Sbjct: 996  RHNIVRQLLETRLNLADPLTKPLNKKLVEETSREMGLMPITEVQSGGNPT 1045


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