BLASTX nr result

ID: Rehmannia25_contig00028458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00028458
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518340.1| conserved hypothetical protein [Ricinus comm...    59   9e-07
gb|EOX98629.1| F-box family protein with a domain of Uncharacter...    57   3e-06
ref|XP_004230661.1| PREDICTED: uncharacterized protein LOC101255...    57   3e-06
ref|XP_002518339.1| conserved hypothetical protein [Ricinus comm...    55   1e-05

>ref|XP_002518340.1| conserved hypothetical protein [Ricinus communis]
           gi|223542560|gb|EEF44100.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 42/138 (30%), Positives = 63/138 (45%)
 Frame = -2

Query: 416 KDTPSPNIWPNLPHHLISLIAKQPNIMQNITSFGCVTKSWRSPSRHCSKSQNWPQLVEIR 237
           K+  +  +WP+LP  LI LIA+  +++++I S G VTKSWR+ +  C  +   P L    
Sbjct: 13  KEANNLELWPDLPQQLIHLIARNSSLLEHICSKG-VTKSWRAQASKCRSNPATPWLELSG 71

Query: 236 EKQRDSNQANAHPHILPTSIFNHWCLSYYYWRISFEEWCPGLYFKGRFRGRIVVMADNLS 57
            ++ D N+  +H   LP      W     YWR   +   P     G   G IV    +  
Sbjct: 72  NRESDHNR-QSHVFHLPIRRGFIW-----YWR-RHKPTPPVYKIIGCSNGLIVAKGASAL 124

Query: 56  DLCLWEPARHSMRYLPPW 3
           D  LW+P       +P W
Sbjct: 125 DYNLWDPVIDGYWCIPRW 142


>gb|EOX98629.1| F-box family protein with a domain of Uncharacterized protein
           function, putative [Theobroma cacao]
          Length = 420

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
 Frame = -2

Query: 392 WPNLPHHLISLIAKQPNIMQNITSFGCVTKSWRSPSRHCSKSQNWPQLVEIREKQRDSNQ 213
           WP+LP  L+ +IAKQP +MQ+I S+G +TK  RSP   C+ +   P  +++ ++   ++ 
Sbjct: 48  WPDLPQILVDIIAKQPALMQDI-SYGGLTKLCRSPPSKCNPNNFTPPCLQLFDEINVNSD 106

Query: 212 ANAHPHILPTSIFNHWCLSYYYWRISFEEWC-PGL-----YFKGRFRGRIVVMADNLSD- 54
            N     L  S    W   ++YW   F  W  P +     ++ G     IV   +  SD 
Sbjct: 107 ENYVEPNLNVSFHRRW---FWYW--YFSRWARPPVRSYWKHYVGFSNEAIVAKGNTFSDP 161

Query: 53  -----LCLWEPA-RHSMRYLPPW 3
                + LW P   +S   LP W
Sbjct: 162 KSSELVYLWYPVDGYSFSRLPEW 184


>ref|XP_004230661.1| PREDICTED: uncharacterized protein LOC101255341 [Solanum
           lycopersicum]
          Length = 389

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 7/137 (5%)
 Frame = -2

Query: 392 WPNLPHHLISLIAKQP-----NIMQNITSFGCVTKSWRSPSRHCSKSQNWPQLVEIREKQ 228
           WPNLP  L++ + +Q       +MQNI  F  VTKSWR+  + CS        +EI +K 
Sbjct: 24  WPNLPQQLLNFMGRQHPDETNRLMQNIC-FPGVTKSWRAVPKQCSNKNAQLPWLEISDKD 82

Query: 227 R-DSNQANAHPHILPTSIFNHWCLSYYYWRISFEEWCPGLYFKGRFRGRIVVMADNLSDL 51
               ++   H   +P  +  +W   +Y  R S++   P  +F G   G IV    + +  
Sbjct: 83  HFFQSKTQEHTLTIPFRLGEYW---WYSRRSSWD--VPWTHFHGCSHGLIVAGGKDPATY 137

Query: 50  CLWEP-ARHSMRYLPPW 3
           CL  P +R + R +P W
Sbjct: 138 CLLIPTSRFTYRSIPTW 154


>ref|XP_002518339.1| conserved hypothetical protein [Ricinus communis]
           gi|223542559|gb|EEF44099.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 335

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/86 (36%), Positives = 44/86 (51%)
 Frame = -2

Query: 404 SPNIWPNLPHHLISLIAKQPNIMQNITSFGCVTKSWRSPSRHCSKSQNWPQLVEIREKQR 225
           S  +WP+LP  LI LI +QP++ Q I S G VTKSW+     C+ +   P L    +   
Sbjct: 52  SSKLWPDLPKKLIYLIERQPSLYQAIFSRG-VTKSWKIKPNKCNSNSTLPWLQLAIDDHE 110

Query: 224 DSNQANAHPHILPTSIFNHWCLSYYY 147
            +N  N  PH    + F   C+ Y+Y
Sbjct: 111 IANNYNKQPHTFNIT-FKRDCIWYWY 135


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