BLASTX nr result
ID: Rehmannia25_contig00028409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00028409
(616 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise... 330 1e-88
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 308 8e-82
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope... 304 1e-80
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 295 5e-78
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 294 2e-77
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 294 2e-77
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe... 293 2e-77
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 287 1e-75
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 287 1e-75
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative... 287 1e-75
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative... 287 1e-75
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 287 1e-75
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 284 1e-74
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 284 1e-74
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 283 3e-74
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 280 2e-73
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 279 5e-73
ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit fa... 276 2e-72
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 276 3e-72
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin... 276 3e-72
>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
Length = 1379
Score = 330 bits (847), Expect = 1e-88
Identities = 158/204 (77%), Positives = 181/204 (88%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 435
LVKD+SS+F+ +YPS DD P E+FGLV + LFRGL+PYQEMVHSISSREVIVRS+RGLTE
Sbjct: 717 LVKDLSSLFRSKYPSSDDCPTEDFGLVCQPLFRGLNPYQEMVHSISSREVIVRSSRGLTE 776
Query: 434 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATA 255
PGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEY NS +I +EFCAGDPVGVLAAT+
Sbjct: 777 PGTLFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYSANSTDIVTEFCAGDPVGVLAATS 836
Query: 254 MSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQENA 75
MSNPAYKAVLD +W+MMK+ILLC +FKND SDRRVILYL++C+CGRKHCQE
Sbjct: 837 MSNPAYKAVLDSSSSSNSAWQMMKDILLCATSFKNDISDRRVILYLTDCECGRKHCQETG 896
Query: 74 ALIVKNHLKKVSLKDTAIEFLIEY 3
AL+V+NHLKKV+LKDTA++FLIEY
Sbjct: 897 ALVVQNHLKKVTLKDTAVDFLIEY 920
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1 [Solanum lycopersicum]
Length = 1632
Score = 308 bits (789), Expect = 8e-82
Identities = 157/205 (76%), Positives = 171/205 (83%), Gaps = 1/205 (0%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 435
LV DM+ +FQK+YPS P+EEFGLV LF GLDPYQ M+HSISSREVIVRSTRGLTE
Sbjct: 719 LVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRSTRGLTE 778
Query: 434 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVLAAT 258
PGTLFKNLMAILRDVVICYDGTVRN SNSIIQFEYG + +N+ SEFCAGDPVGVLAAT
Sbjct: 779 PGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVGVLAAT 838
Query: 257 AMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQEN 78
AMSNPAYKAVLD SWEMMKEILLCGV+FKND SDRRVILYL++C C R +C+E
Sbjct: 839 AMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGYCREK 898
Query: 77 AALIVKNHLKKVSLKDTAIEFLIEY 3
AA +VKNHL KV LKD A EFLIEY
Sbjct: 899 AAYVVKNHLSKVCLKDAADEFLIEY 923
>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1127
Score = 304 bits (778), Expect = 1e-80
Identities = 155/205 (75%), Positives = 169/205 (82%), Gaps = 1/205 (0%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 435
LV DM+ +FQK+YPS P+EEFGLV LF GLDPYQ M+HSISSREVIVRSTRGLTE
Sbjct: 270 LVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRSTRGLTE 329
Query: 434 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNS-ANIASEFCAGDPVGVLAAT 258
PGTLF NLMAILRDVVICYDGTVRN SNSIIQFEYG + +N+ SEFCAGDPVGVLAAT
Sbjct: 330 PGTLFXNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVGVLAAT 389
Query: 257 AMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQEN 78
AMSNPAYKA LD SWEMMKEILLCGV+FKND SDRRVILYL++C C R +C+E
Sbjct: 390 AMSNPAYKAXLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGYCREK 449
Query: 77 AALIVKNHLKKVSLKDTAIEFLIEY 3
AA +VKNHL KV LKD A EFLIEY
Sbjct: 450 AAYVVKNHLSKVCLKDAADEFLIEY 474
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 295 bits (756), Expect = 5e-78
Identities = 143/204 (70%), Positives = 168/204 (82%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 435
LV+D++S+F ++YP D YP+EEFG V R F GLDPY+E+VHSI++REVIVRS++GL E
Sbjct: 519 LVEDVASLFHQKYPFADVYPSEEFGFVSRCFFHGLDPYEEIVHSIATREVIVRSSKGLAE 578
Query: 434 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATA 255
PGTLFKNLMA+LRDVVICYDGTVRN SNS+IQFEYGV + F AGDPVGVLAATA
Sbjct: 579 PGTLFKNLMAVLRDVVICYDGTVRNISSNSVIQFEYGVGGMQSQNLFPAGDPVGVLAATA 638
Query: 254 MSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQENA 75
MSNPAYKAVLD SW+MMKEIL C NF+ND +DRRVILYL++C CGRK+CQENA
Sbjct: 639 MSNPAYKAVLDSSPNSNSSWDMMKEILFCRANFRNDINDRRVILYLNDCCCGRKYCQENA 698
Query: 74 ALIVKNHLKKVSLKDTAIEFLIEY 3
+ +VKNHLKKVSL+D AIE IEY
Sbjct: 699 SCLVKNHLKKVSLRDAAIELAIEY 722
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 294 bits (752), Expect = 2e-77
Identities = 148/206 (71%), Positives = 170/206 (82%), Gaps = 2/206 (0%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 438
LV+ M+ +F+ +YP DYP+ EFGL+ F GLDPY+EMVHSIS+RE+IVRS+RGL+
Sbjct: 778 LVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLS 837
Query: 437 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFC-AGDPVGVLAA 261
EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV + F AG+PVGVLAA
Sbjct: 838 EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAA 897
Query: 260 TAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQE 81
TAMSNPAYKAVLD SWE+MKEILLC VNFKND DRRVILYL++CDCGRK+C+E
Sbjct: 898 TAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRE 957
Query: 80 NAALIVKNHLKKVSLKDTAIEFLIEY 3
NAA +VKN LKK SLKDTA+EF+IEY
Sbjct: 958 NAAYLVKNQLKKASLKDTAVEFMIEY 983
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 294 bits (752), Expect = 2e-77
Identities = 148/206 (71%), Positives = 170/206 (82%), Gaps = 2/206 (0%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 438
LV+ M+ +F+ +YP DYP+ EFGL+ F GLDPY+EMVHSIS+RE+IVRS+RGL+
Sbjct: 718 LVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLS 777
Query: 437 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFC-AGDPVGVLAA 261
EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV + F AG+PVGVLAA
Sbjct: 778 EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAA 837
Query: 260 TAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQE 81
TAMSNPAYKAVLD SWE+MKEILLC VNFKND DRRVILYL++CDCGRK+C+E
Sbjct: 838 TAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRE 897
Query: 80 NAALIVKNHLKKVSLKDTAIEFLIEY 3
NAA +VKN LKK SLKDTA+EF+IEY
Sbjct: 898 NAAYLVKNQLKKASLKDTAVEFMIEY 923
>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 293 bits (751), Expect = 2e-77
Identities = 147/205 (71%), Positives = 170/205 (82%), Gaps = 1/205 (0%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 435
LV+D++S+ +YPS DYP+ E+GLV F GLDPY+ +VHSI++REVIVRS+RGL+E
Sbjct: 721 LVEDVASLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLSE 780
Query: 434 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVGVLAAT 258
PGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGVN + F AG+PVGVLAAT
Sbjct: 781 PGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNIGSRPQHLFPAGEPVGVLAAT 840
Query: 257 AMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQEN 78
AMSNPAYKAVLD SWE+MKEILLC VNFKN+ DRRVILYL+NC CGRK+C+E
Sbjct: 841 AMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCGRKYCRER 900
Query: 77 AALIVKNHLKKVSLKDTAIEFLIEY 3
AA +VKN LKKVSLKDTA+EF+IEY
Sbjct: 901 AACLVKNQLKKVSLKDTAVEFMIEY 925
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 287 bits (735), Expect = 1e-75
Identities = 142/204 (69%), Positives = 167/204 (81%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 435
LV+D++S F++ YP +YP ++GL+ F GLDPY+EM HSIS+REVIVRS+RGL+E
Sbjct: 719 LVEDIASHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSE 778
Query: 434 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATA 255
PGTLFKNLMA+LRDVVICYDGTVRN CSNSIIQF+Y VN+ S F AG+PVGVLAATA
Sbjct: 779 PGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLAATA 838
Query: 254 MSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQENA 75
MSNPAYKAVLD SWE+MKEILLC V+F ND DRRVILYL++C CGRK+CQE A
Sbjct: 839 MSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQERA 898
Query: 74 ALIVKNHLKKVSLKDTAIEFLIEY 3
A +VKN LK+VSLKD A+EFLIEY
Sbjct: 899 AYMVKNQLKRVSLKDAAVEFLIEY 922
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 287 bits (735), Expect = 1e-75
Identities = 142/204 (69%), Positives = 167/204 (81%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 435
LV+D++S F++ YP +YP ++GL+ F GLDPY+EM HSIS+REVIVRS+RGL+E
Sbjct: 720 LVEDIASHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSE 779
Query: 434 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATA 255
PGTLFKNLMA+LRDVVICYDGTVRN CSNSIIQF+Y VN+ S F AG+PVGVLAATA
Sbjct: 780 PGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLAATA 839
Query: 254 MSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQENA 75
MSNPAYKAVLD SWE+MKEILLC V+F ND DRRVILYL++C CGRK+CQE A
Sbjct: 840 MSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQERA 899
Query: 74 ALIVKNHLKKVSLKDTAIEFLIEY 3
A +VKN LK+VSLKD A+EFLIEY
Sbjct: 900 AYMVKNQLKRVSLKDAAVEFLIEY 923
>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao]
Length = 1675
Score = 287 bits (735), Expect = 1e-75
Identities = 146/205 (71%), Positives = 167/205 (81%), Gaps = 1/205 (0%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 438
LV+D++ FQ YPS DYP+ EFGL+ F GLDPY+ MVHSIS+REVIVRS+RGL+
Sbjct: 719 LVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLS 778
Query: 437 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAAT 258
EPGTLFKNLMAILRDVVICYDGTVRN SNSIIQF+YG+N A +F AG+PVGVLAAT
Sbjct: 779 EPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGVLAAT 837
Query: 257 AMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQEN 78
AMSNPAYKAVLD SWE+MKEILLC V+ KND DRRVILYL +CDCGRK+CQEN
Sbjct: 838 AMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQEN 897
Query: 77 AALIVKNHLKKVSLKDTAIEFLIEY 3
AA +VKNHL+KV LKDTA+E + EY
Sbjct: 898 AAYLVKNHLRKVKLKDTAVELIFEY 922
>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 287 bits (735), Expect = 1e-75
Identities = 146/205 (71%), Positives = 167/205 (81%), Gaps = 1/205 (0%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 438
LV+D++ FQ YPS DYP+ EFGL+ F GLDPY+ MVHSIS+REVIVRS+RGL+
Sbjct: 719 LVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLS 778
Query: 437 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAAT 258
EPGTLFKNLMAILRDVVICYDGTVRN SNSIIQF+YG+N A +F AG+PVGVLAAT
Sbjct: 779 EPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGVLAAT 837
Query: 257 AMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQEN 78
AMSNPAYKAVLD SWE+MKEILLC V+ KND DRRVILYL +CDCGRK+CQEN
Sbjct: 838 AMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQEN 897
Query: 77 AALIVKNHLKKVSLKDTAIEFLIEY 3
AA +VKNHL+KV LKDTA+E + EY
Sbjct: 898 AAYLVKNHLRKVKLKDTAVELIFEY 922
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 287 bits (735), Expect = 1e-75
Identities = 145/206 (70%), Positives = 171/206 (83%), Gaps = 2/206 (0%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPS-CDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 438
LV+D+SS++Q +YPS DYP+ EFGLV R GLDP + M+HSI++REVIVRS+RGL+
Sbjct: 717 LVEDVSSLYQNKYPSDIVDYPSAEFGLVHRGFVHGLDPVEGMIHSIATREVIVRSSRGLS 776
Query: 437 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVGVLAA 261
EPGTLFKNLMA LRDVVICYDGTVRN CSNSIIQFEYGV S + F AG+PVGVLAA
Sbjct: 777 EPGTLFKNLMATLRDVVICYDGTVRNVCSNSIIQFEYGVKSGSGPENLFPAGEPVGVLAA 836
Query: 260 TAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQE 81
TAMSNPAYKAVLD SW++MKEILLC VNFKN+ DRRV+LYL++C CGRK+C+E
Sbjct: 837 TAMSNPAYKAVLDSTPSSNSSWDLMKEILLCKVNFKNELIDRRVVLYLNDCGCGRKYCRE 896
Query: 80 NAALIVKNHLKKVSLKDTAIEFLIEY 3
+AA +VKN LKKVSLKDTA+EF+IEY
Sbjct: 897 HAAYLVKNRLKKVSLKDTAVEFMIEY 922
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 284 bits (727), Expect = 1e-74
Identities = 144/207 (69%), Positives = 169/207 (81%), Gaps = 3/207 (1%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 438
L++D++S+F RY S DYP+ EFGLV F GLDPY+EMVHSIS+REV+VRS+RGLT
Sbjct: 718 LIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLT 777
Query: 437 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIA--SEFCAGDPVGVLA 264
EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQ EYG+ + + S F G+PVGVLA
Sbjct: 778 EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLA 837
Query: 263 ATAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQ 84
ATAMS PAYKAVLD SW+MMKEILLC V+FKN+ DRRVILYL+NC CGRK+C
Sbjct: 838 ATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYCN 897
Query: 83 ENAALIVKNHLKKVSLKDTAIEFLIEY 3
ENAA +VK+HLKKV+LKD A++F+IEY
Sbjct: 898 ENAAYVVKSHLKKVTLKDAAMDFMIEY 924
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 284 bits (727), Expect = 1e-74
Identities = 144/207 (69%), Positives = 169/207 (81%), Gaps = 3/207 (1%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 438
L++D++S+F RY S DYP+ EFGLV F GLDPY+EMVHSIS+REV+VRS+RGLT
Sbjct: 748 LIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLT 807
Query: 437 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIA--SEFCAGDPVGVLA 264
EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQ EYG+ + + S F G+PVGVLA
Sbjct: 808 EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLA 867
Query: 263 ATAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQ 84
ATAMS PAYKAVLD SW+MMKEILLC V+FKN+ DRRVILYL+NC CGRK+C
Sbjct: 868 ATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYCN 927
Query: 83 ENAALIVKNHLKKVSLKDTAIEFLIEY 3
ENAA +VK+HLKKV+LKD A++F+IEY
Sbjct: 928 ENAAYVVKSHLKKVTLKDAAMDFMIEY 954
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 283 bits (724), Expect = 3e-74
Identities = 141/204 (69%), Positives = 167/204 (81%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 435
LV+D+S ++ ++YP DYP+ E GL+ F GLDPY+E+VHSIS+REVIVRS+RGLTE
Sbjct: 722 LVEDVSCLYTRKYPENVDYPSAEHGLIRSCFFHGLDPYEEIVHSISTREVIVRSSRGLTE 781
Query: 434 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATA 255
PGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG SA + + AG+PVGVLAATA
Sbjct: 782 PGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGRGSAR--NLYPAGEPVGVLAATA 839
Query: 254 MSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQENA 75
MSNPAYKAVLD SWE+MKEILLC F+N+ DRRVILYL++C CGRK+C+E A
Sbjct: 840 MSNPAYKAVLDSSPSSNSSWELMKEILLCKAIFRNELIDRRVILYLNHCGCGRKYCREQA 899
Query: 74 ALIVKNHLKKVSLKDTAIEFLIEY 3
+V+N LKKVSLKDTA+EF+IEY
Sbjct: 900 TYLVQNQLKKVSLKDTAVEFMIEY 923
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 280 bits (717), Expect = 2e-73
Identities = 139/206 (67%), Positives = 170/206 (82%), Gaps = 2/206 (0%)
Frame = -3
Query: 614 LVKDMSSMFQ-KRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 438
LV+D++S FQ K + DDYP+ EFGL+ F GLDPY+E+VHSI++RE+I RS+RGL+
Sbjct: 804 LVEDVASHFQLKCFYDKDDYPSAEFGLLKGCFFHGLDPYEELVHSIATREIIDRSSRGLS 863
Query: 437 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVGVLAA 261
EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+ S + A F AG+PVGVLAA
Sbjct: 864 EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSGDAAQHLFPAGEPVGVLAA 923
Query: 260 TAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQE 81
T+MSNPAYKAVLD SW MKEILLC VNF+N+ +DRRVILYL++CDCGR +C+E
Sbjct: 924 TSMSNPAYKAVLDASPSSNSSWGFMKEILLCKVNFRNEPNDRRVILYLNDCDCGRNYCRE 983
Query: 80 NAALIVKNHLKKVSLKDTAIEFLIEY 3
NAA +V+N L+KVSLKD A++F++EY
Sbjct: 984 NAAYLVQNQLRKVSLKDAALDFIVEY 1009
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 279 bits (713), Expect = 5e-73
Identities = 139/206 (67%), Positives = 168/206 (81%), Gaps = 2/206 (0%)
Frame = -3
Query: 614 LVKDMSSMFQ-KRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 438
LV+D+ S F K + D YP+ EFGL+ F GLDPY+E+VHSI++RE+IVRS+RGL+
Sbjct: 722 LVEDVGSHFHVKCFYDGDGYPSAEFGLLKGCFFHGLDPYEELVHSIATREIIVRSSRGLS 781
Query: 437 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVGVLAA 261
EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+ S + + F AG+PVGVLAA
Sbjct: 782 EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSGDKSQPLFPAGEPVGVLAA 841
Query: 260 TAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQE 81
T+MSNPAYKAVLD SWE MKEILLC VNF+N+ +DRRVILYL++CDCGR +C+E
Sbjct: 842 TSMSNPAYKAVLDASPSSNSSWEFMKEILLCKVNFRNEPNDRRVILYLNDCDCGRSYCRE 901
Query: 80 NAALIVKNHLKKVSLKDTAIEFLIEY 3
NAA +VKN L+KVSLKD A++F +EY
Sbjct: 902 NAAYLVKNQLRKVSLKDAALDFTVEY 927
>ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit family protein [Populus
trichocarpa] gi|550346661|gb|EEE84013.2| DNA-directed RNA
polymerase alpha subunit family protein [Populus
trichocarpa]
Length = 842
Score = 276 bits (707), Expect = 2e-72
Identities = 142/205 (69%), Positives = 165/205 (80%), Gaps = 2/205 (0%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPS-CDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 438
LV+D++S FQ +YP+ +YP+ ++GL+ + F GLD Y+EM HSIS+REVIVRS+RGL+
Sbjct: 638 LVEDLASHFQSKYPTNLLNYPSAQYGLIQSSFFHGLDAYEEMAHSISTREVIVRSSRGLS 697
Query: 437 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVLAA 261
EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQ EYGV A S F AG+PVGVLAA
Sbjct: 698 EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQSEYGVKVGAESQSLFPAGEPVGVLAA 757
Query: 260 TAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQE 81
TAMSNPAYKAVLD SW+MMKEILLC V FKND +DRRVILY + C CGR+HCQE
Sbjct: 758 TAMSNPAYKAVLDSTPSSNSSWDMMKEILLCKVGFKNDQADRRVILYFNYCGCGREHCQE 817
Query: 80 NAALIVKNHLKKVSLKDTAIEFLIE 6
AA +VKNHL+KVSLKD A F+IE
Sbjct: 818 KAAFLVKNHLEKVSLKDVAKCFMIE 842
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 276 bits (706), Expect = 3e-72
Identities = 142/206 (68%), Positives = 165/206 (80%), Gaps = 2/206 (0%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPS-CDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 438
LV+D++S F +YP+ DYP+ ++GL+ + F GLD Y+EM HSIS+REVIVRS+RGL+
Sbjct: 724 LVEDLASHFLSKYPANLFDYPSAQYGLIQNSFFHGLDAYEEMAHSISTREVIVRSSRGLS 783
Query: 437 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVLAA 261
EPGTLFKNLMAILRDVVICYDGTVRN SNSIIQFEYGV S F AG+PVGVLAA
Sbjct: 784 EPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGVKVGTESQSLFPAGEPVGVLAA 843
Query: 260 TAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQE 81
TAMSNPAYKAVLD SW+MMKEILLC V FKND +DRRVILYL++C CGR +CQE
Sbjct: 844 TAMSNPAYKAVLDSTPSSNCSWDMMKEILLCKVGFKNDLADRRVILYLNDCGCGRNYCQE 903
Query: 80 NAALIVKNHLKKVSLKDTAIEFLIEY 3
AA +VKNHL+KVSLKD A F+IEY
Sbjct: 904 RAAYLVKNHLEKVSLKDIAKCFMIEY 929
>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 991
Score = 276 bits (706), Expect = 3e-72
Identities = 140/205 (68%), Positives = 162/205 (79%), Gaps = 1/205 (0%)
Frame = -3
Query: 614 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 435
LV+DM+ F+ +YPS DYP+ + GL+ F GLDPY+EMVHSIS+REV+VRSTRGL+E
Sbjct: 721 LVEDMALHFESKYPSDIDYPSAKHGLIQSCFFHGLDPYEEMVHSISAREVMVRSTRGLSE 780
Query: 434 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSA-NIASEFCAGDPVGVLAAT 258
PGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+ + S F AG+PVGVLAAT
Sbjct: 781 PGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGMKAGIKAQSLFPAGEPVGVLAAT 840
Query: 257 AMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLSNCDCGRKHCQEN 78
AMSNPAYKAVLD SWE+MKEIL C VNFKND +DRRVILY + C CG+ +CQE
Sbjct: 841 AMSNPAYKAVLDSTPSSNSSWELMKEILQCRVNFKNDITDRRVILYFNYCGCGKFYCQER 900
Query: 77 AALIVKNHLKKVSLKDTAIEFLIEY 3
A VKNHL+KV LKD A+ F+ EY
Sbjct: 901 LAYSVKNHLEKVILKDIALCFMCEY 925