BLASTX nr result
ID: Rehmannia25_contig00028335
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00028335
(703 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355439.1| PREDICTED: putative pentatricopeptide repeat... 59 1e-06
ref|XP_003635358.1| PREDICTED: putative pentatricopeptide repeat... 59 1e-06
ref|XP_003635122.1| PREDICTED: putative pentatricopeptide repeat... 59 1e-06
emb|CAN66782.1| hypothetical protein VITISV_013509 [Vitis vinifera] 59 1e-06
ref|XP_006855406.1| hypothetical protein AMTR_s00057p00151990 [A... 57 4e-06
ref|XP_003605422.1| Pentatricopeptide repeat-containing protein ... 57 4e-06
ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containi... 57 6e-06
ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containi... 57 6e-06
gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japo... 56 1e-05
gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indi... 56 1e-05
ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago ... 56 1e-05
gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sat... 56 1e-05
ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group] g... 56 1e-05
>ref|XP_006355439.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Solanum tuberosum]
Length = 461
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAIPPSSVM 568
N+YALH KW DVG +R MKEK+V+KEAG SWIEV ++ +S++
Sbjct: 417 NMYALHKKWIDVGDMREKMKEKRVKKEAGRSWIEVENSNTVTSII 461
>ref|XP_003635358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Vitis vinifera]
Length = 384
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAIPPSSVM 568
N+YA +GKW DV +R+ M+E+ VRK AG SWIEV + IP SS+M
Sbjct: 339 NMYACYGKWGDVSVVRKLMRERGVRKGAGCSWIEVENVIPASSMM 383
>ref|XP_003635122.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Vitis vinifera]
gi|297744381|emb|CBI37355.3| unnamed protein product
[Vitis vinifera]
Length = 601
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAIPPSSVM 568
N+YA +GKW DV +R+ M+E+ VRK AG SWIEV + IP SS+M
Sbjct: 556 NMYACYGKWGDVSVVRKLMRERGVRKGAGCSWIEVENVIPASSMM 600
>emb|CAN66782.1| hypothetical protein VITISV_013509 [Vitis vinifera]
Length = 625
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAIPPSSVM 568
N+YA +GKW DV +R+ M+E+ VRK AG SWIEV + IP SS+M
Sbjct: 580 NMYACYGKWGDVSVVRKLMRERGVRKGAGCSWIEVENVIPASSMM 624
>ref|XP_006855406.1| hypothetical protein AMTR_s00057p00151990 [Amborella trichopoda]
gi|548859172|gb|ERN16873.1| hypothetical protein
AMTR_s00057p00151990 [Amborella trichopoda]
Length = 866
Score = 57.4 bits (137), Expect = 4e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAI 586
NIYA GKWE++G +R+AM+E+ VRKE G SWIEV ++
Sbjct: 795 NIYAQEGKWEEMGRVRKAMRERSVRKEVGCSWIEVKGSV 833
>ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 839
Score = 57.4 bits (137), Expect = 4e-06
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAI 586
N+YA G+WEDV +IR+ MK+K++ KEAGSSWIEV + +
Sbjct: 678 NLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQV 716
>ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X2 [Setaria italica]
Length = 681
Score = 57.0 bits (136), Expect = 6e-06
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAI 586
NIYA+HG+W+D G +RR M E V+KEAG SWIEV + +
Sbjct: 606 NIYAMHGEWQDAGRVRRRMDEVGVKKEAGESWIEVKNEV 644
>ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X1 [Setaria italica]
Length = 683
Score = 57.0 bits (136), Expect = 6e-06
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAI 586
NIYA+HG+W+D G +RR M E V+KEAG SWIEV + +
Sbjct: 606 NIYAMHGEWQDAGRVRRRMDEVGVKKEAGESWIEVKNEV 644
>gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 56.2 bits (134), Expect = 1e-05
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAI 586
NIYA+HG+WED +RR M E V+K+AG SWIE+N+ +
Sbjct: 623 NIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEV 661
>gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 56.2 bits (134), Expect = 1e-05
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAI 586
NIYA+HG+WED +RR M E V+K+AG SWIE+N+ +
Sbjct: 577 NIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEV 615
>ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago truncatula]
gi|355512648|gb|AES94271.1| hypothetical protein
MTR_5g012660 [Medicago truncatula]
Length = 519
Score = 56.2 bits (134), Expect = 1e-05
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVN 595
N+YA G+WEDV IR M +K+VRKEAGSSWIEVN
Sbjct: 483 NMYASFGRWEDVNVIRSLMSKKRVRKEAGSSWIEVN 518
>gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 56.2 bits (134), Expect = 1e-05
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAI 586
NIYA+HG+WED +RR M E V+K+AG SWIE+N+ +
Sbjct: 550 NIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEV 588
>ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide
repeat domain contianing protein [Oryza sativa Japonica
Group] gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza
sativa Japonica Group] gi|215686748|dbj|BAG89598.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 56.2 bits (134), Expect = 1e-05
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = -2
Query: 702 NIYALHGKWEDVGSIRRAMKEKKVRKEAGSSWIEVNDAI 586
NIYA+HG+WED +RR M E V+K+AG SWIE+N+ +
Sbjct: 623 NIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEV 661