BLASTX nr result

ID: Rehmannia25_contig00028234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00028234
         (419 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339069.1| PREDICTED: small RNA degrading nuclease 3-li...    69   6e-10
ref|XP_004249491.1| PREDICTED: small RNA degrading nuclease 3-li...    66   4e-09

>ref|XP_006339069.1| PREDICTED: small RNA degrading nuclease 3-like [Solanum tuberosum]
          Length = 497

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
 Frame = -3

Query: 417 KKRSVEDDTTPGILKKLKTEQTSAELEDSI-----QCETHLKEIERLKAELNQRDQEISN 253
           KKRS++D+      KK KTE    EL+++      QCETH  EIE+LK +L+ RD+EIS 
Sbjct: 424 KKRSLQDEEAVVESKKPKTEDQCTELKEAAGAGCNQCETHSMEIEKLKKDLSHRDEEIST 483

Query: 252 LNKIIAALARKQG 214
           LNKII  L RKQG
Sbjct: 484 LNKIIVNLVRKQG 496


>ref|XP_004249491.1| PREDICTED: small RNA degrading nuclease 3-like [Solanum
           lycopersicum]
          Length = 497

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
 Frame = -3

Query: 417 KKRSVEDDTTPGILKKLKTEQTSAELEDSI-----QCETHLKEIERLKAELNQRDQEISN 253
           KKRS+ED+      KK KTE    EL+ +      QCETH  EIE+LK +L  RD+EIS 
Sbjct: 424 KKRSLEDEEAIVESKKPKTEDQCKELKKAAGAGCNQCETHSMEIEKLKKDLAHRDEEISA 483

Query: 252 LNKIIAALARKQG 214
           LNKII  L RKQG
Sbjct: 484 LNKIIVNLVRKQG 496


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