BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00028216
         (956 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   352   2e-94
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul...   336   7e-90
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   241   2e-61
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   202   1e-49
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        200   8e-49
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     198   3e-48
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]   194   3e-47
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     193   9e-47
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   193   9e-47
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   191   5e-46
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]   189   1e-45
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   189   2e-45
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   189   2e-45
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                188   2e-45
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]   182   2e-43
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...   181   5e-43
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   179   1e-42
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   179   1e-42
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   179   1e-42
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           178   3e-42

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  352 bits (902), Expect = 2e-94
 Identities = 181/274 (66%), Positives = 213/274 (77%), Gaps = 4/274 (1%)
 Frame = -1

Query: 812 DVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNI 633
           DV F DEDLALMLLSSLPDEFEHLETTLLHGK++VSL VVC+ALYS+EL         + 
Sbjct: 77  DVKFEDEDLALMLLSSLPDEFEHLETTLLHGKENVSLDVVCSALYSHELRKQDKMKTKST 136

Query: 632 AADDEALVAXXXXXXXXXXXXXXXXXKAK-LDKDECAFCHEKGHWKKDCPKLKNKGKAPQ 456
            ++ EALVA                 K + + KDECAFCHEKGHWKKDCPKL+ K K  Q
Sbjct: 137 TSE-EALVARGRQQSQTKERRGMSKSKGRAVAKDECAFCHEKGHWKKDCPKLQKKEKVLQ 195

Query: 455 DACVAEGES--EDEFSLVVSPLISRS-DEWILDSGCTYHMSPVKEWFFNFEEINGGVVYM 285
           DA VAE +S  E + SL+VS   S   DEWILDSGCTYHM P+++WFF F+E++GGVVYM
Sbjct: 196 DANVAECKSDVESDISLIVSLSASLYLDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYM 255

Query: 284 GNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLK 105
           GNDN CKT GIGSI+L+NHDGSTR+L DVRYVP LKKNLISLGALESKGL+VT+RDG+LK
Sbjct: 256 GNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILK 315

Query: 104 ATSGSLVVMKGIRRNNLYYYQGNTVLGTAAVADS 3
           ATSG+LV++KG+ +NNLYYYQG+TV+GT A A S
Sbjct: 316 ATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATS 349


>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
          Length = 324

 Score =  336 bits (862), Expect = 7e-90
 Identities = 169/257 (65%), Positives = 194/257 (75%), Gaps = 3/257 (1%)
 Frame = -1

Query: 956 LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
           LEDKFLKKSGQNKLLMKKRLFRF+Y+ GTTMN HIT FNQLVA LLNLDV F DEDLALM
Sbjct: 68  LEDKFLKKSGQNKLLMKKRLFRFDYQQGTTMNAHITMFNQLVAYLLNLDVKFEDEDLALM 127

Query: 776 LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXX 597
           L+SSLPDEFEHLETTLLHGKD+VSL VVC+ALYS+EL         +  +++  +     
Sbjct: 128 LVSSLPDEFEHLETTLLHGKDNVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVTRGGQ 187

Query: 596 XXXXXXXXXXXXXXKAKLDKDECAFCHEKGHWKKDCPKLKNKGKAPQDACVAEGES--ED 423
                            + KDECAFCHEKGHWKKDCPKL+ K K PQDA VAE +S  E 
Sbjct: 188 QSQTKERRGMCKSKGRVVAKDECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECKSDVES 247

Query: 422 EFSLVVS-PLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGS 246
           + SL+VS    S  DEWILDSGCTYHM P+++WFF F+E++GGVVYMGNDN CKT GIGS
Sbjct: 248 DISLIVSLSASSYPDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTAGIGS 307

Query: 245 IRLKNHDGSTRVLTDVR 195
           I+L+NHDGSTR+L DVR
Sbjct: 308 IKLRNHDGSTRILRDVR 324


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  241 bits (616), Expect = 2e-61
 Identities = 135/321 (42%), Positives = 186/321 (57%), Gaps = 3/321 (0%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE  ++ KS  NKLL+K+RLF      GT + +H+   N L+ +L N+DV   DED AL+
Sbjct: 85   LESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHLEQLNTLLLELRNIDVKIEDEDAALI 144

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXX 597
            LL SLP  FE+   + + GKD VSL  V +AL+S EL         +I        +   
Sbjct: 145  LLVSLPMSFENFVQSFIVGKDTVSLEEVRSALHSRELRHKANGTSTDIQPSG-LFTSSRK 203

Query: 596  XXXXXXXXXXXXXXKAKLDKDECAFCHEKGHWKKDCPKLKNKG-KAPQDACVAEGE--SE 426
                           AK D D C +C EKGHWK DCPK K +  K    A VAE +  SE
Sbjct: 204  GRKNGGKKNKPMSKGAKPD-DVCNYCKEKGHWKFDCPKKKKQSEKQSVSAAVAEEDTNSE 262

Query: 425  DEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGS 246
            ++ +LV       SD W+LDSG +YH+ P +EWF  +E+++GG + M N + CK  G GS
Sbjct: 263  EDIALVADEHTHHSDVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGS 322

Query: 245  IRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMKGIR 66
            I+++ HDGS   L +VR+VP + KNLISL  L+SKG   + +DGVL+   GS +++KG+ 
Sbjct: 323  IKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVM 382

Query: 65   RNNLYYYQGNTVLGTAAVADS 3
            R  LY+ QG+TV G+A VA S
Sbjct: 383  RGTLYFLQGSTVTGSAHVASS 403


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  202 bits (515), Expect = 1e-49
 Identities = 115/340 (33%), Positives = 185/340 (54%), Gaps = 22/340 (6%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE   + K   +K+ +K++LF  + +   ++ DH++ F ++VADL ++++ + +EDL L+
Sbjct: 29   LEQICMTKDLTSKMHLKQKLFLHKLQDDESVMDHLSTFKEIVADLESMEIKYDEEDLGLI 88

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXX 597
            LL SLP  + +   T+L+ +D ++L  V  AL++ E          + +  +  +V    
Sbjct: 89   LLCSLPSSYANFRDTILYSRDTLTLQEVYDALHAKEKMKKMVPSEGSNSQPESLVVRGRQ 148

Query: 596  XXXXXXXXXXXXXXKAKLDKDE-------CAFCHEKGHWKKDCPKLKNK----------G 468
                               + +       C +C   GH   DC KL+NK          G
Sbjct: 149  QEKNTDNKSRDKSSSGYRGRSKSRGRYKSCKYCKRGGHDISDCWKLQNKEKHKGNYKPKG 208

Query: 467  KAPQD---ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGG 297
            K  +    A   + + + E  +  +  +  SDEW+LD+GCTYHM P ++WF  +E + GG
Sbjct: 209  KQEEQGKAAVATDNKPDAELLVAYAGCVQTSDEWLLDTGCTYHMCPNRDWFTTYEPVQGG 268

Query: 296  VVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRD 117
             V MG++  CK  G+G+I++K  DG  R L+DVR++P+LK+NLISL  L+ KG   +  D
Sbjct: 269  NVLMGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGD 328

Query: 116  GVLKATSGSLVVMKG-IRRNNLYYYQGNTVLG-TAAVADS 3
            G+LK T GSLVVMK  I+  +LY+ QG T++G  AAV DS
Sbjct: 329  GILKVTKGSLVVMKADIKNADLYHLQGTTIVGNVAAVTDS 368


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  200 bits (508), Expect = 8e-49
 Identities = 117/340 (34%), Positives = 188/340 (55%), Gaps = 22/340 (6%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE   + K   +K+ +K++LF  + +   ++ DH++AF ++VADL +++V + ++DLAL+
Sbjct: 87   LEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHLSAFKEIVADLESMEVKYDEKDLALI 146

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXX 597
            LL SLP  + +   T+L+ +D ++L  V  AL++ E          + +  +  +V    
Sbjct: 147  LLCSLPSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGSQ 206

Query: 596  XXXXXXXXXXXXXXKAKLDKDE-------CAFCHEKGHWKKDCPKLKNK----------G 468
                           +   + +       C +C   GH    C KL++K          G
Sbjct: 207  QEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKG 266

Query: 467  KAPQD---ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGG 297
            K  ++   A V + +S+ E  +  +     SD+WILD+ CTYHM P ++WF  +E + GG
Sbjct: 267  KKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGG 326

Query: 296  VVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRD 117
             V MG+D  C+  GIG++++K  DG  R L+DVR++PNLK++LISL  L+ KG   +  D
Sbjct: 327  TVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGD 386

Query: 116  GVLKATSGSLVVMK-GIRRNNLYYYQGNTVLG-TAAVADS 3
            G+LK T GSLVVMK  I+  NLY+ QG T+LG  A V+DS
Sbjct: 387  GILKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVSDS 426


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  198 bits (503), Expect = 3e-48
 Identities = 114/335 (34%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
 Frame = -1

Query: 941  LKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALMLLSSL 762
            + K   +K+ +K++LF  + +   ++ DH++AF ++VADL +++V + +EDL L+LL SL
Sbjct: 1    MTKDLTSKMHLKQKLFLHKLQDDGSVMDHLSAFKEIVADLESMEVKYDEEDLGLILLCSL 60

Query: 761  PDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXXXXXXX 582
            P  + +   T+L+ +D ++L  V  AL++ E          + +  +  +V         
Sbjct: 61   PSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNT 120

Query: 581  XXXXXXXXXKAKLDKDE-------CAFCHEKGHWKKDCPKLKNKGKAPQD---------- 453
                          + +       C +C   GH   +C KL++K K  +           
Sbjct: 121  NNKSRDKSSSIYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEE 180

Query: 452  ---ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMG 282
               A V + +S+ E  +  +     SD+WILD+ CTYHM P ++WF  +E + GG V MG
Sbjct: 181  GKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMG 240

Query: 281  NDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKA 102
            +D  C+  GIG++++K  DG  R L DVR++PNLK++LISL  L+ KG   +  DG+LK 
Sbjct: 241  DDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKV 300

Query: 101  TSGSLVVMKG-IRRNNLYYYQGNTVLG-TAAVADS 3
            T GSLVVMK  I+  NLY+ +G T+LG  AAV+DS
Sbjct: 301  TKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDS 335


>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
          Length = 947

 Score =  194 bits (494), Expect = 3e-47
 Identities = 114/327 (34%), Positives = 175/327 (53%), Gaps = 12/327 (3%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE  ++ KS  N+L  K +L+ F+   G ++ +H   FN+++ DL N+D+T S+ED A++
Sbjct: 132  LESLYMTKSLANRLHKKIKLYTFKITPGMSIEEHFDHFNKIILDLENIDITVSNEDKAIL 191

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXX 597
            LL+SL   + +++  +++G+D ++   V + L+  EL            + DE+      
Sbjct: 192  LLTSLDASYTNMKEAIMYGRDSMTFDEVQSILHPRELQKQEE-------SKDESGEGLNI 244

Query: 596  XXXXXXXXXXXXXXKAK----LDKDECAFCHEKGHWKKDCP--------KLKNKGKAPQD 453
                          KAK      K +C  CH++GH+KKDC         K  N+G A   
Sbjct: 245  RGRYDKREKKCKNLKAKSKSNTKKFKCFICHKEGHFKKDCSDKRQNTIKKTVNEGDA--- 301

Query: 452  ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDN 273
            A + +G    +   V    +    EWILDSGC++HM P+K WF +F+E NGG V +GN+ 
Sbjct: 302  AVILDGYDSAKVLNVAE--MDSGKEWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNK 359

Query: 272  ACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSG 93
             CK  G   +R+K++DG  RVL  VRY+P LK+NLISLG L+  G     +   L+   G
Sbjct: 360  HCKILGTSIVRIKHYDGIERVLEVVRYIPELKRNLISLGMLDKLGYTFKSKPNSLRVARG 419

Query: 92   SLVVMKGIRRNNLYYYQGNTVLGTAAV 12
            SL VMKG  +N LY   G T+ G  ++
Sbjct: 420  SLTVMKGTIKNGLYTLIGQTMTGKVSI 446


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  193 bits (490), Expect = 9e-47
 Identities = 115/340 (33%), Positives = 185/340 (54%), Gaps = 22/340 (6%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE   + K   +K+ +K++LF  + +   ++ DH++ F ++VADL +++V + +EDL L+
Sbjct: 122  LEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHLSTFKEIVADLESIEVKYDEEDLGLI 181

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXX 597
            LL SLP  + +   T+L+  D + L  V  AL++ E          + +  +  +V    
Sbjct: 182  LLCSLPSSYANFRDTILYSHDTLILKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQ 241

Query: 596  XXXXXXXXXXXXXXKAKLDKDE-------CAFCHEKGHWKKDCPKLKNK----------G 468
                           +   + +       C +C   GH   +C KL++K          G
Sbjct: 242  QEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKG 301

Query: 467  KAPQD---ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGG 297
            K  ++   A V + +S+ E  +  +     SD+WILD+  TYHM P ++WF  +E + GG
Sbjct: 302  KKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGG 361

Query: 296  VVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRD 117
             V MG+D  C+  GIG++++K  DG  R L+DVR++PNLK++LISL  L+ KG   +  D
Sbjct: 362  TVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGD 421

Query: 116  GVLKATSGSLVVMKG-IRRNNLYYYQGNTVLG-TAAVADS 3
            G+LK T GSLVVMK  I+  NLY+ +G T+LG  AAV+DS
Sbjct: 422  GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDS 461


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  193 bits (490), Expect = 9e-47
 Identities = 115/340 (33%), Positives = 185/340 (54%), Gaps = 22/340 (6%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE   + K   +K+ +K++LF  + +   ++ DH++ F ++VADL +++V + +EDL L+
Sbjct: 122  LEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHLSTFKEIVADLESIEVKYDEEDLGLI 181

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXX 597
            LL SLP  + +   T+L+  D + L  V  AL++ E          + +  +  +V    
Sbjct: 182  LLCSLPSSYANFRDTILYSHDTLILKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQ 241

Query: 596  XXXXXXXXXXXXXXKAKLDKDE-------CAFCHEKGHWKKDCPKLKNK----------G 468
                           +   + +       C +C   GH   +C KL++K          G
Sbjct: 242  QEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKG 301

Query: 467  KAPQD---ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGG 297
            K  ++   A V + +S+ E  +  +     SD+WILD+  TYHM P ++WF  +E + GG
Sbjct: 302  KKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGG 361

Query: 296  VVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRD 117
             V MG+D  C+  GIG++++K  DG  R L+DVR++PNLK++LISL  L+ KG   +  D
Sbjct: 362  TVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGD 421

Query: 116  GVLKATSGSLVVMKG-IRRNNLYYYQGNTVLG-TAAVADS 3
            G+LK T GSLVVMK  I+  NLY+ +G T+LG  AAV+DS
Sbjct: 422  GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDS 461


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score =  191 bits (484), Expect = 5e-46
 Identities = 110/315 (34%), Positives = 175/315 (55%), Gaps = 2/315 (0%)
 Frame = -1

Query: 941 LKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALMLLSSL 762
           + K   +K+ +K++LF  + +   ++ DH++AF ++VADL +++V   +EDL L+LL SL
Sbjct: 92  MTKDLTSKMHLKQKLFLHKLQDDESVMDHLSAFKEIVADLESMEVKHDEEDLGLILLCSL 151

Query: 761 PDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXXXXXXX 582
           P  + +   T+L+ +D ++L  V  AL++ E          + +  +  +V         
Sbjct: 152 PSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAESLVVGVGNRRRTQ 211

Query: 581 XXXXXXXXXKAKLDKDECAFCHEKGHWKKDCPKLKNKGKAPQDACVAEGESEDEFSLVVS 402
                     A +           G    +  K + +GKA   A V + +S+ E  +   
Sbjct: 212 TTNQEIKAQVATV-----------GDQSPEAGKKEEEGKA---AVVTDEKSDAELLVAYV 257

Query: 401 PLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDG 222
                SD+WILD+ CTYHM P ++WF  +E + GG V MG+D  C+  GIG++++K  DG
Sbjct: 258 GCAQTSDQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDG 317

Query: 221 STRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMKG-IRRNNLYYY 45
             R L+DVR++PNLK++LIS   L+ KG   +  DG+LK T GSLVVMK  I+  NLY+ 
Sbjct: 318 CIRTLSDVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHL 377

Query: 44  QGNTVLG-TAAVADS 3
           +G T+LG  AAV+DS
Sbjct: 378 RGTTILGNVAAVSDS 392


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score =  189 bits (480), Expect = 1e-45
 Identities = 113/306 (36%), Positives = 165/306 (53%), Gaps = 4/306 (1%)
 Frame = -1

Query: 956 LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
           LE   + KS +N+L +KKRL   + +   ++ DH   FN+ + DL N+DV  + ED A+ 
Sbjct: 42  LESLHMTKSLKNRLYLKKRLHTLQMKESMSIKDHFNEFNKTIXDLRNIDVKVNYEDQAIF 101

Query: 776 LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXX 597
           L+ SLP+ +EH    +++G+  + +  V  AL S EL           +   E LVA   
Sbjct: 102 LMCSLPNSYEHFVDIMMYGRGTLFIKDVRVALNSRELKKMVFKSRKYDSG--EGLVARGR 159

Query: 596 XXXXXXXXXXXXXXKAKLDKDECAFCHEKGHWKKDCPKLKNKGKAPQ----DACVAEGES 429
                         K++   ++C  C ++GH+ K+ P  K K         DA  A+ E+
Sbjct: 160 TRKKNNGRRGRSRSKSR-GNNKCFKCKKEGHYVKNXPDRKGKENKRNYNSGDATFAK-EN 217

Query: 428 EDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIG 249
            +   +++  + +  DEWILDSGC+YHMSP  +WF  ++ I+GG V MGN  ACK  GI 
Sbjct: 218 SNTTDVLLVXVTNSDDEWILDSGCSYHMSPNGDWFSTYQPIDGGKVLMGNKVACKVVGIH 277

Query: 248 SIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMKGI 69
            I++K H G  R LT+VR+VP L KNLI L  L+S G I     GVL+ + G LVVM G 
Sbjct: 278 XIQIKMHGGIIRTLTNVRHVPKLNKNLIFLRTLDSNGCIYKAGGGVLRVSKGGLVVMNGK 337

Query: 68  RRNNLY 51
           + N LY
Sbjct: 338 KINGLY 343


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  189 bits (479), Expect = 2e-45
 Identities = 113/340 (33%), Positives = 184/340 (54%), Gaps = 22/340 (6%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE   + K   +K+ +K+ LF  + +   ++ DH++AF +++ADL +++V + +EDL L+
Sbjct: 294  LEQICMTKDLTSKMHLKQTLFLHKLQDDGSVMDHLSAFKEIIADLESMEVKYDEEDLGLI 353

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXX 597
            LL SLP  + +   T+L+ +D ++L  V  AL+  E          + +  +  +V    
Sbjct: 354  LLCSLPSSYANFRDTILYSRDTLTLKEVYDALHVKEKMKKMVPSEGSNSQAEGLIVWGRQ 413

Query: 596  XXXXXXXXXXXXXXKAKLDKDE-------CAFCHEKGHWKKDCPKLKNK----------G 468
                           +   + +       C +C   GH   +C KL +K          G
Sbjct: 414  QEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKG 473

Query: 467  KAPQD---ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGG 297
            K  ++   A V + +S+ E  +  +     SD+WIL++ C YHM P ++WF  +E +  G
Sbjct: 474  KKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVG 533

Query: 296  VVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRD 117
             V MG+D  C+  GIG++++K  DG  R L+DVR++PNLK++LISL  L+ KG   +  D
Sbjct: 534  TVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGD 593

Query: 116  GVLKATSGSLVVMKG-IRRNNLYYYQGNTVLG-TAAVADS 3
            G+LK T GSLVVMK  I+  NLY+ +G T+LG  AAV+DS
Sbjct: 594  GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDS 633


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
            gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
            Japonica Group]
          Length = 1601

 Score =  189 bits (479), Expect = 2e-45
 Identities = 113/340 (33%), Positives = 184/340 (54%), Gaps = 22/340 (6%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE   + K   +K+ +K+ LF  + +   ++ DH++AF +++ADL +++V + +EDL L+
Sbjct: 87   LEQICMTKDLTSKMHLKQTLFLHKLQDDGSVMDHLSAFKEIIADLESMEVKYDEEDLGLI 146

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXX 597
            LL SLP  + +   T+L+ +D ++L  V  AL+  E          + +  +  +V    
Sbjct: 147  LLCSLPSSYANFRDTILYSRDTLTLKEVYDALHVKEKMKKMVPSEGSNSQAEGLIVWGRQ 206

Query: 596  XXXXXXXXXXXXXXKAKLDKDE-------CAFCHEKGHWKKDCPKLKNK----------G 468
                           +   + +       C +C   GH   +C KL +K          G
Sbjct: 207  QEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKG 266

Query: 467  KAPQD---ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGG 297
            K  ++   A V + +S+ E  +  +     SD+WIL++ C YHM P ++WF  +E +  G
Sbjct: 267  KKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVG 326

Query: 296  VVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRD 117
             V MG+D  C+  GIG++++K  DG  R L+DVR++PNLK++LISL  L+ KG   +  D
Sbjct: 327  TVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGD 386

Query: 116  GVLKATSGSLVVMKG-IRRNNLYYYQGNTVLG-TAAVADS 3
            G+LK T GSLVVMK  I+  NLY+ +G T+LG  AAV+DS
Sbjct: 387  GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDS 426


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  188 bits (478), Expect = 2e-45
 Identities = 108/308 (35%), Positives = 167/308 (54%), Gaps = 22/308 (7%)
 Frame = -1

Query: 860  DHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAAL 681
            DH++ F ++VADL +++V + +EDL L+LL SLP  + +   T+L+ +D ++L  V  AL
Sbjct: 104  DHLSVFKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDAL 163

Query: 680  YSYELXXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKDE-------CAF 522
            ++ E          + +  +  +V                   +   + +       C +
Sbjct: 164  HAKEKMKKMVPSEGSNSQAEGLVVQGSQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKY 223

Query: 521  CHEKGHWKKDCPKLKNKGKAP-------------QDACVAEGESEDEFSLVVSPLISRSD 381
            C   GH    C KL++K K               + A V + +S+ E  +  +     SD
Sbjct: 224  CKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQTSD 283

Query: 380  EWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTD 201
            +WILD+ CTYHM P ++WF  +E + GG V MG+D  C+  GIG++++K  DG  R L+D
Sbjct: 284  QWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 343

Query: 200  VRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMKG-IRRNNLYYYQGNTVLG 24
            VR++PNLK++LISL  L+ KG   +  DG+LK T GSLVVMK  I+  NLY+ QG T+LG
Sbjct: 344  VRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILG 403

Query: 23   -TAAVADS 3
              A V+DS
Sbjct: 404  NVATVSDS 411


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score =  182 bits (462), Expect = 2e-43
 Identities = 101/309 (32%), Positives = 167/309 (54%), Gaps = 8/309 (2%)
 Frame = -1

Query: 956 LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
           LE  ++ KS  N+L    +L+ F+     ++ +H+  FN+++ DL N+D+  S+ED A++
Sbjct: 88  LESLYMTKSLANRLHKXIKLYTFKMTPSMSIEEHLDHFNKIILDLKNIDIAVSNEDKAIL 147

Query: 776 LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXX 597
           LL+SL   + +++  +++G+D ++   V + L++ EL             +   +     
Sbjct: 148 LLTSLDASYTNMKEAIMYGRDILTFDEVQSILHARELHKQEESKEEL--GEGLNIRGKSK 205

Query: 596 XXXXXXXXXXXXXXKAKLDKDECAFCHEKGHWKKDCPKLK--------NKGKAPQDACVA 441
                         K+K  K +C  CH++GH+KKDCP ++        N+G A     + 
Sbjct: 206 KREKKKGNNSKSRSKSKTKKFKCFICHKEGHFKKDCPDMRQNTXKKTMNEGDATM---IL 262

Query: 440 EGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKT 261
           +G   D   ++    +    EWILDSGC++HM P+K WF +F+E NGG V +GN+  CK 
Sbjct: 263 DGY--DNAGVLNVAEVDSGKEWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKI 320

Query: 260 TGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVV 81
            G G++++K++DG  RVL D+RY+P LK NLISLG L+  G         L+   GSL V
Sbjct: 321 LGTGTVKIKHYDGIERVLEDIRYIPELKMNLISLGMLDKLGYTFKSEPNSLRVARGSLTV 380

Query: 80  MKGIRRNNL 54
           MK  R  ++
Sbjct: 381 MKHQRLGHI 389


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  181 bits (458), Expect = 5e-43
 Identities = 109/316 (34%), Positives = 169/316 (53%), Gaps = 14/316 (4%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            L+  ++ K+  N++  K++L+ F+     ++  +I  F Q++ DL N++V  SDED A++
Sbjct: 103  LDKLYMSKALPNRIYPKQKLYSFKMSENLSVEGNIDEFLQIITDLENMNVIISDEDQAIL 162

Query: 776  LLSSLPDEFEHLETTLLH--GKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAX 603
            LL++LP  F+ L+ TL +  GK  ++L  V AA+YS EL          + A+   +   
Sbjct: 163  LLTALPKAFDQLKDTLKYSSGKSILTLDEVAAAIYSKELELGSVKKSIKVQAEGLYVKDK 222

Query: 602  XXXXXXXXXXXXXXXXKAKLDKDE-CAFCHEKGHWKKDCPKLKNKGKAPQDACV------ 444
                            K K  K   C  C E+GH++  CP  +NK +  Q   V      
Sbjct: 223  NENKGKGEQKGKGKGKKGKSKKKPGCWTCGEEGHFRSSCPN-QNKPQFKQSQVVKGESSG 281

Query: 443  AEGESEDEFSLVVSPLISRS-----DEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGN 279
             +G   +     VS  +S +     DEWILD+GC+YHM+  +EWF  F E  GG V MGN
Sbjct: 282  GKGNLAEAAGYYVSEALSSTEVHLEDEWILDTGCSYHMTYKREWFHEFNEDAGGSVRMGN 341

Query: 278  DNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKAT 99
                +  G+G+IR+KN DG T VLT+VRY+P++ +NL+SLG  E  G      DG+L+  
Sbjct: 342  KTVSRVRGVGTIRVKNSDGLTIVLTNVRYIPDMDRNLLSLGTFEKAGYKFESEDGILRIK 401

Query: 98   SGSLVVMKGIRRNNLY 51
            +G+ V++ G R + LY
Sbjct: 402  AGNQVLLTGRRYDTLY 417


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  179 bits (455), Expect = 1e-42
 Identities = 109/330 (33%), Positives = 178/330 (53%), Gaps = 14/330 (4%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE   + K   +K+ MK +LF  + +   ++  H+  F ++VADL++++V + DEDL L+
Sbjct: 85   LESICMSKDLTSKMQMKMKLFTLKMKEEDSVITHMAEFKKIVADLVSMEVKYDDEDLGLL 144

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEAL-VAXX 600
            LL SLP+ + +   T+L  +D+++L  V  AL + E          + ++  EAL V   
Sbjct: 145  LLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRGR 204

Query: 599  XXXXXXXXXXXXXXXKAKL----DKDECAFCHEKGHWKKDCPKL-----KNK--GKAPQD 453
                           ++K     +K  C +C  K H   +C K+     KNK  GK    
Sbjct: 205  TENRTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVA 264

Query: 452  ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEI-NGGVVYMGND 276
            +  A  +   +  +V +  ++  DEWILDS C++H+   + WF +++ +  G VV MG+D
Sbjct: 265  SAAASDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDD 324

Query: 275  NACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATS 96
            N C   GIGS+++K  DG TR L +VRY+P + +NLISL  L+++G   +  DGVLK + 
Sbjct: 325  NPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSK 384

Query: 95   GSLVVMKG-IRRNNLYYYQGNTVLGTAAVA 9
            GSLV +KG +    LY  +G T+ G+ + A
Sbjct: 385  GSLVCLKGDVNSAKLYVLRGCTLTGSDSAA 414


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  179 bits (454), Expect = 1e-42
 Identities = 109/330 (33%), Positives = 178/330 (53%), Gaps = 14/330 (4%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE   + K   +K+ MK +LF  + +   ++  H+  F ++VADL++++V + DEDL L+
Sbjct: 85   LESICMSKDLTSKMQMKMKLFTLKMKEEDSVITHMAEFKKIVADLVSMEVKYDDEDLGLL 144

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEAL-VAXX 600
            LL SLP+ + +   T+L  +D+++L  V  AL + E          + ++  EAL V   
Sbjct: 145  LLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRGR 204

Query: 599  XXXXXXXXXXXXXXXKAKL----DKDECAFCHEKGHWKKDCPKL-----KNK--GKAPQD 453
                           ++K     +K  C +C  K H   +C K+     KNK  GK    
Sbjct: 205  TENRTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVA 264

Query: 452  ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEI-NGGVVYMGND 276
            +  A  +   +  +V +  ++  DEWILDS C++H+   + WF +++ +  G VV MG+D
Sbjct: 265  SAAASDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDD 324

Query: 275  NACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATS 96
            N C   GIGS+++K  DG TR L +VRY+P + +NLISL  L+++G   +  DGVLK + 
Sbjct: 325  NPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSK 384

Query: 95   GSLVVMKG-IRRNNLYYYQGNTVLGTAAVA 9
            GSLV +KG +    LY  +G T+ G+ + A
Sbjct: 385  GSLVCLKGDLNSAKLYVLRGCTLTGSDSAA 414


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  179 bits (454), Expect = 1e-42
 Identities = 109/330 (33%), Positives = 178/330 (53%), Gaps = 14/330 (4%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE   + K   +K+ MK +LF  + +   ++  H+  F ++VADL++++V + DEDL L+
Sbjct: 85   LESICMSKDLTSKMQMKMKLFTLKMKEEDSVITHMAEFKKIVADLVSMEVKYDDEDLGLL 144

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEAL-VAXX 600
            LL SLP+ + +   T+L  +D+++L  V  AL + E          + ++  EAL V   
Sbjct: 145  LLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRGR 204

Query: 599  XXXXXXXXXXXXXXXKAKL----DKDECAFCHEKGHWKKDCPKL-----KNK--GKAPQD 453
                           ++K     +K  C +C  K H   +C K+     KNK  GK    
Sbjct: 205  TENRTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVA 264

Query: 452  ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEI-NGGVVYMGND 276
            +  A  +   +  +V +  ++  DEWILDS C++H+   + WF +++ +  G VV MG+D
Sbjct: 265  SAAASDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDD 324

Query: 275  NACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATS 96
            N C   GIGS+++K  DG TR L +VRY+P + +NLISL  L+++G   +  DGVLK + 
Sbjct: 325  NPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSK 384

Query: 95   GSLVVMKG-IRRNNLYYYQGNTVLGTAAVA 9
            GSLV +KG +    LY  +G T+ G+ + A
Sbjct: 385  GSLVCLKGDLNSAKLYVLRGCTLTGSDSAA 414


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  178 bits (451), Expect = 3e-42
 Identities = 109/330 (33%), Positives = 177/330 (53%), Gaps = 14/330 (4%)
 Frame = -1

Query: 956  LEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALM 777
            LE   + K   +K+ MK +LF  + +   ++  HI  F ++VADL++++V + DEDL L+
Sbjct: 87   LESICMSKDLTSKMQMKMKLFTLKMKEEDSVITHIAEFKKIVADLVSMEVKYDDEDLGLL 146

Query: 776  LLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEAL-VAXX 600
            LL SLP+ + +   T+L  +D+++L  V  AL + E          + ++  EAL V   
Sbjct: 147  LLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRGR 206

Query: 599  XXXXXXXXXXXXXXXKAKL----DKDECAFCHEKGHWKKDCPKL-----KNK--GKAPQD 453
                           ++K     +K  C +C  K H   +C K+     KNK  GK    
Sbjct: 207  TENKTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVA 266

Query: 452  ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEI-NGGVVYMGND 276
            +     +   +  +V +  ++  DEWILDS C++H+   + WF +++ +  G VV MG+D
Sbjct: 267  SAAVSDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDD 326

Query: 275  NACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATS 96
            N C   GIGS+++K  DG TR L +VRY+P + +NLISL  L+++G   +  DGVLK + 
Sbjct: 327  NPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSK 386

Query: 95   GSLVVMKG-IRRNNLYYYQGNTVLGTAAVA 9
            GSLV +KG +    LY  +G T+ G+ + A
Sbjct: 387  GSLVCLKGDLNSAKLYVLRGCTLPGSDSAA 416