BLASTX nr result
ID: Rehmannia25_contig00028096
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00028096
(570 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB61222.1| cyclin D3a [Antirrhinum majus] 137 3e-30
ref|XP_004252752.1| PREDICTED: cyclin-D3-2-like [Solanum lycoper... 116 5e-24
gb|EMJ28530.1| hypothetical protein PRUPE_ppa015949mg [Prunus pe... 109 4e-22
gb|ADD51364.1| D3-type cyclin [Malus domestica] 108 7e-22
ref|NP_001275138.1| D-type cyclin family 3 subgroup 3 [Solanum t... 108 7e-22
ref|XP_006342647.1| PREDICTED: cyclin-D3-3-like isoform X2 [Sola... 107 2e-21
ref|NP_001234758.1| CycD3;3 protein [Solanum lycopersicum] gi|64... 107 3e-21
dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis] 106 5e-21
gb|EOY14367.1| D3-type cyclin isoform 3 [Theobroma cacao] 105 8e-21
gb|EOY14366.1| D3-type cyclin isoform 2 [Theobroma cacao] 105 8e-21
gb|EOY14365.1| D3-type cyclin isoform 1 [Theobroma cacao] 105 8e-21
ref|XP_002326955.1| predicted protein [Populus trichocarpa] gi|1... 104 1e-20
ref|XP_006374876.1| cyclin D3.1 family protein [Populus trichoca... 103 2e-20
gb|AAO13248.1|AF181993_1 cyclin D [Populus tremula x Populus tre... 103 2e-20
gb|AEV41135.1| D3-type cyclin [Populus x canadensis] 103 2e-20
gb|EXB89228.1| hypothetical protein L484_006781 [Morus notabilis] 103 3e-20
ref|XP_002285001.1| PREDICTED: cyclin-D3-1 [Vitis vinifera] gi|3... 103 3e-20
ref|XP_006342646.1| PREDICTED: cyclin-D3-3-like isoform X1 [Sola... 102 9e-20
emb|CAN79444.1| hypothetical protein VITISV_042479 [Vitis vinifera] 102 9e-20
ref|XP_002302430.1| cyclin D3.1 family protein [Populus trichoca... 100 2e-19
>emb|CAB61222.1| cyclin D3a [Antirrhinum majus]
Length = 343
Score = 137 bits (344), Expect = 3e-30
Identities = 72/106 (67%), Positives = 78/106 (73%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
ATATMLYVISSLEPCIGVEYQDQL ILGI KDKVE+CC+LIQEVATSVHF S NKRKFG
Sbjct: 238 ATATMLYVISSLEPCIGVEYQDQLINILGINKDKVEECCKLIQEVATSVHFQSGNKRKFG 297
Query: 181 SMPDSPKGVVDVCFSSDSSNDSNWGMXXXXXXXXXXXXXXKKIKSQ 318
S+P SPKGVVD+ FS D S W + KKIK+Q
Sbjct: 298 SLPYSPKGVVDISFSCDDS----WPLDSTASVSSSPEHLSKKIKTQ 339
>ref|XP_004252752.1| PREDICTED: cyclin-D3-2-like [Solanum lycopersicum]
Length = 325
Score = 116 bits (290), Expect = 5e-24
Identities = 57/82 (69%), Positives = 68/82 (82%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
A ATML+VI LEPCIG EYQ+QL ILG+ KD V DCC+L+QEVA++V F +SNKRKFG
Sbjct: 220 AAATMLHVIDKLEPCIGQEYQEQLFGILGVVKDNVTDCCKLVQEVASNVDF-NSNKRKFG 278
Query: 181 SMPDSPKGVVDVCFSSDSSNDS 246
++P SP GV+DV FSSDSSNDS
Sbjct: 279 ALPGSPMGVMDVSFSSDSSNDS 300
>gb|EMJ28530.1| hypothetical protein PRUPE_ppa015949mg [Prunus persica]
Length = 376
Score = 109 bits (273), Expect = 4e-22
Identities = 54/83 (65%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATS-VHFYSSNKRKF 177
ATATML+V++++EPC+ VEYQ+QL ILGI KDKV+DC RL+ E+++S H SNKRKF
Sbjct: 260 ATATMLHVVNNIEPCLHVEYQNQLLGILGIDKDKVDDCYRLVLELSSSGGHGKPSNKRKF 319
Query: 178 GSMPDSPKGVVDVCFSSDSSNDS 246
GS+P SP GV+D+ FSSDSSNDS
Sbjct: 320 GSIPGSPNGVIDMSFSSDSSNDS 342
>gb|ADD51364.1| D3-type cyclin [Malus domestica]
Length = 376
Score = 108 bits (271), Expect = 7e-22
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 3/85 (3%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYS---SNKR 171
ATATML+V+ ++EPC+ +EYQ QL ILGI KDKV+DCC+LI E+ +S S SNKR
Sbjct: 258 ATATMLHVVKNMEPCLLIEYQTQLLGILGINKDKVDDCCKLISELTSSGGNGSGKQSNKR 317
Query: 172 KFGSMPDSPKGVVDVCFSSDSSNDS 246
KFGS+P SP GV+DV FSSDSSNDS
Sbjct: 318 KFGSVPGSPSGVMDVSFSSDSSNDS 342
>ref|NP_001275138.1| D-type cyclin family 3 subgroup 3 [Solanum tuberosum]
gi|162956917|gb|ABY25837.1| D-type cyclin family 3
subgroup 3 [Solanum tuberosum]
Length = 332
Score = 108 bits (271), Expect = 7e-22
Identities = 55/82 (67%), Positives = 66/82 (80%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
A+ATML+V+ L+PCIG +YQDQL ILGI KDKVE+C RLIQEVA ++ F SNKRKFG
Sbjct: 229 ASATMLHVLDRLKPCIGEKYQDQLLGILGIVKDKVEECYRLIQEVACNIDF-DSNKRKFG 287
Query: 181 SMPDSPKGVVDVCFSSDSSNDS 246
++P P GV+DV FSSD SNDS
Sbjct: 288 TLPGXPTGVMDVSFSSDYSNDS 309
>ref|XP_006342647.1| PREDICTED: cyclin-D3-3-like isoform X2 [Solanum tuberosum]
Length = 322
Score = 107 bits (268), Expect = 2e-21
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
A ATML+VI LEPC G EYQ+QL ILGI KD V DC +L+QEVA+++ F +S+KRKFG
Sbjct: 217 AAATMLHVIDKLEPCTGQEYQEQLLGILGIVKDNVTDCYKLVQEVASNIDF-NSHKRKFG 275
Query: 181 SMPDSPKGVVDVCFSSDSSNDS 246
++P SP GV+DV FSSDSSNDS
Sbjct: 276 ALPGSPIGVMDVSFSSDSSNDS 297
>ref|NP_001234758.1| CycD3;3 protein [Solanum lycopersicum] gi|6434201|emb|CAB60838.1|
CycD3;3 [Solanum lycopersicum]
Length = 336
Score = 107 bits (266), Expect = 3e-21
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
A+ATML+V+ L+PCIG +YQDQL ILGI K+KVE C RLIQEVA ++ F SNKRKFG
Sbjct: 233 ASATMLHVLDRLKPCIGEKYQDQLLGILGIVKEKVEGCYRLIQEVACNIDF-GSNKRKFG 291
Query: 181 SMPDSPKGVVDVCFSSDSSNDS 246
++P SP GV+D+ FSSD SNDS
Sbjct: 292 TLPGSPTGVMDMSFSSDYSNDS 313
>dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]
Length = 371
Score = 106 bits (264), Expect = 5e-21
Identities = 55/82 (67%), Positives = 62/82 (75%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
+TATML V SSLEPC+ VEYQ+QL IL I KDKVEDC +L+ E + +H SNKRKF
Sbjct: 252 STATMLLVFSSLEPCLAVEYQNQLLGILQIDKDKVEDCYKLMLESTSGIH--QSNKRKFR 309
Query: 181 SMPDSPKGVVDVCFSSDSSNDS 246
SMP SP V DVCFSSDSSNDS
Sbjct: 310 SMPGSPNCVTDVCFSSDSSNDS 331
>gb|EOY14367.1| D3-type cyclin isoform 3 [Theobroma cacao]
Length = 326
Score = 105 bits (262), Expect = 8e-21
Identities = 52/82 (63%), Positives = 65/82 (79%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
ATATML+V+ S+EP + VEYQ+QL ILGI K+KV+ CC+LI E+AT V SNKR+F
Sbjct: 204 ATATMLHVVDSVEPNLRVEYQNQLLGILGIDKEKVDKCCKLIIELATRVQGNQSNKRRFS 263
Query: 181 SMPDSPKGVVDVCFSSDSSNDS 246
S+P SP GV+D+ FSSDSSNDS
Sbjct: 264 SIPGSPNGVMDLSFSSDSSNDS 285
>gb|EOY14366.1| D3-type cyclin isoform 2 [Theobroma cacao]
Length = 327
Score = 105 bits (262), Expect = 8e-21
Identities = 52/82 (63%), Positives = 65/82 (79%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
ATATML+V+ S+EP + VEYQ+QL ILGI K+KV+ CC+LI E+AT V SNKR+F
Sbjct: 205 ATATMLHVVDSVEPNLRVEYQNQLLGILGIDKEKVDKCCKLIIELATRVQGNQSNKRRFS 264
Query: 181 SMPDSPKGVVDVCFSSDSSNDS 246
S+P SP GV+D+ FSSDSSNDS
Sbjct: 265 SIPGSPNGVMDLSFSSDSSNDS 286
>gb|EOY14365.1| D3-type cyclin isoform 1 [Theobroma cacao]
Length = 364
Score = 105 bits (262), Expect = 8e-21
Identities = 52/82 (63%), Positives = 65/82 (79%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
ATATML+V+ S+EP + VEYQ+QL ILGI K+KV+ CC+LI E+AT V SNKR+F
Sbjct: 242 ATATMLHVVDSVEPNLRVEYQNQLLGILGIDKEKVDKCCKLIIELATRVQGNQSNKRRFS 301
Query: 181 SMPDSPKGVVDVCFSSDSSNDS 246
S+P SP GV+D+ FSSDSSNDS
Sbjct: 302 SIPGSPNGVMDLSFSSDSSNDS 323
>ref|XP_002326955.1| predicted protein [Populus trichocarpa]
gi|159025711|emb|CAN88856.1| D3-type cyclin [Populus
trichocarpa]
Length = 379
Score = 104 bits (260), Expect = 1e-20
Identities = 54/83 (65%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHF-YSSNKRKF 177
A ATMLYVI ++EP + EYQ QL +ILGI KDKVEDC + + E A HF SNKRKF
Sbjct: 257 AAATMLYVIDNIEPSLAAEYQSQLLSILGIDKDKVEDCSKFLMEFALRYHFKLLSNKRKF 316
Query: 178 GSMPDSPKGVVDVCFSSDSSNDS 246
S+P SP GVVDV FSSDSSNDS
Sbjct: 317 CSLPGSPSGVVDVSFSSDSSNDS 339
>ref|XP_006374876.1| cyclin D3.1 family protein [Populus trichocarpa]
gi|550323185|gb|ERP52673.1| cyclin D3.1 family protein
[Populus trichocarpa]
Length = 379
Score = 103 bits (258), Expect = 2e-20
Identities = 54/83 (65%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHF-YSSNKRKF 177
A ATMLYVI ++EP + EYQ QL +ILGI KDKVEDC + + E A HF SNKRKF
Sbjct: 257 AAATMLYVIDNIEPSLAAEYQSQLLSILGIDKDKVEDCSKFLMEFALRDHFKLLSNKRKF 316
Query: 178 GSMPDSPKGVVDVCFSSDSSNDS 246
S+P SP GVVDV FSSDSSNDS
Sbjct: 317 CSLPGSPSGVVDVSFSSDSSNDS 339
>gb|AAO13248.1|AF181993_1 cyclin D [Populus tremula x Populus tremuloides]
Length = 376
Score = 103 bits (258), Expect = 2e-20
Identities = 54/83 (65%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHF-YSSNKRKF 177
A ATMLYVI ++EP + EYQ QL +ILGI KDKVEDC + + E A HF SNKRKF
Sbjct: 254 AAATMLYVIDNIEPSLAAEYQSQLLSILGIDKDKVEDCSKFLMEFALRDHFKLLSNKRKF 313
Query: 178 GSMPDSPKGVVDVCFSSDSSNDS 246
S+P SP GVVDV FSSDSSNDS
Sbjct: 314 CSLPGSPSGVVDVSFSSDSSNDS 336
>gb|AEV41135.1| D3-type cyclin [Populus x canadensis]
Length = 379
Score = 103 bits (258), Expect = 2e-20
Identities = 54/83 (65%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHF-YSSNKRKF 177
A ATMLYVI ++EP + EYQ QL +ILGI KDKVEDC + + E A HF SNKRKF
Sbjct: 257 AAATMLYVIDNIEPSLAAEYQSQLWSILGIDKDKVEDCSKFLMEFALRDHFKLLSNKRKF 316
Query: 178 GSMPDSPKGVVDVCFSSDSSNDS 246
S+P SP GVVDV FSSDSSNDS
Sbjct: 317 CSLPGSPSGVVDVSFSSDSSNDS 339
>gb|EXB89228.1| hypothetical protein L484_006781 [Morus notabilis]
Length = 366
Score = 103 bits (257), Expect = 3e-20
Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
ATATML+V+ S+EPC+ VE+Q+QL ILGI KDK EDCC+LI E+A S + S KRKFG
Sbjct: 252 ATATMLHVVDSIEPCLQVEFQNQLLGILGIDKDKAEDCCKLISELA-SANVGQSKKRKFG 310
Query: 181 --SMPDSPKGVVDVCFSSDSSNDS 246
+P SP GV+DV FSSDSSNDS
Sbjct: 311 VVVVPGSPNGVMDVSFSSDSSNDS 334
>ref|XP_002285001.1| PREDICTED: cyclin-D3-1 [Vitis vinifera]
gi|302142269|emb|CBI19472.3| unnamed protein product
[Vitis vinifera]
Length = 372
Score = 103 bits (257), Expect = 3e-20
Identities = 52/82 (63%), Positives = 61/82 (74%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
ATA ML+VI S+EPCI V+YQ QL ILGI KDKVEDC +LI ++A+S + NKRKF
Sbjct: 249 ATAIMLHVIDSVEPCIRVQYQSQLLGILGIDKDKVEDCSQLILDIASSARCHHHNKRKFA 308
Query: 181 SMPDSPKGVVDVCFSSDSSNDS 246
S P SP GV+D FS DSSNDS
Sbjct: 309 STPGSPNGVMDGWFSCDSSNDS 330
>ref|XP_006342646.1| PREDICTED: cyclin-D3-3-like isoform X1 [Solanum tuberosum]
Length = 329
Score = 102 bits (253), Expect = 9e-20
Identities = 54/89 (60%), Positives = 67/89 (75%), Gaps = 7/89 (7%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGI-------KKDKVEDCCRLIQEVATSVHFYS 159
A ATML+VI LEPC G EYQ+QL ILGI K+D V DC +L+QEVA+++ F +
Sbjct: 217 AAATMLHVIDKLEPCTGQEYQEQLLGILGIVKESNRVKQDNVTDCYKLVQEVASNIDF-N 275
Query: 160 SNKRKFGSMPDSPKGVVDVCFSSDSSNDS 246
S+KRKFG++P SP GV+DV FSSDSSNDS
Sbjct: 276 SHKRKFGALPGSPIGVMDVSFSSDSSNDS 304
>emb|CAN79444.1| hypothetical protein VITISV_042479 [Vitis vinifera]
Length = 419
Score = 102 bits (253), Expect = 9e-20
Identities = 51/82 (62%), Positives = 60/82 (73%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
ATA ML+VI S+EPCI +YQ QL ILGI KDKVEDC +LI ++A+S + NKRKF
Sbjct: 249 ATAIMLHVIDSVEPCIRAQYQSQLLGILGIDKDKVEDCSQLILDIASSARCHHHNKRKFS 308
Query: 181 SMPDSPKGVVDVCFSSDSSNDS 246
S P SP GV+D FS DSSNDS
Sbjct: 309 STPGSPNGVMDGWFSCDSSNDS 330
>ref|XP_002302430.1| cyclin D3.1 family protein [Populus trichocarpa]
gi|222844156|gb|EEE81703.1| cyclin D3.1 family protein
[Populus trichocarpa]
Length = 371
Score = 100 bits (250), Expect = 2e-19
Identities = 49/82 (59%), Positives = 59/82 (71%)
Frame = +1
Query: 1 ATATMLYVISSLEPCIGVEYQDQLQAILGIKKDKVEDCCRLIQEVATSVHFYSSNKRKFG 180
ATA MLY+I +EP + EYQ QL ILGI KD VEDC +L+ E+A HF S+KRK+
Sbjct: 254 ATAVMLYIIDGVEPSLAAEYQSQLLGILGIDKDMVEDCSKLVMELAPRDHFKFSSKRKYS 313
Query: 181 SMPDSPKGVVDVCFSSDSSNDS 246
S+P SP GV+DV FSSDSSN S
Sbjct: 314 SIPGSPNGVIDVSFSSDSSNYS 335