BLASTX nr result
ID: Rehmannia25_contig00028055
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00028055
(471 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004964674.1| PREDICTED: 60S ribosomal protein L39-like [S... 71 1e-10
ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like ... 71 1e-10
ref|XP_006338352.1| PREDICTED: 60S ribosomal protein L39-3-like ... 71 2e-10
gb|EMS51669.1| 60S ribosomal protein L39 [Triticum urartu] 70 3e-10
pdb|3J61|LL Chain l, Localization Of The Large Subunit Ribosomal... 70 4e-10
gb|EPS68963.1| hypothetical protein M569_05807, partial [Genlise... 69 5e-10
ref|XP_004973151.1| PREDICTED: 60S ribosomal protein L39-3-like ... 69 5e-10
ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group] g... 69 5e-10
dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa... 69 5e-10
ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group] g... 69 5e-10
gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays] 69 5e-10
ref|NP_001048392.1| Os02g0796900 [Oryza sativa Japonica Group] g... 69 5e-10
gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma c... 69 6e-10
gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana] 69 6e-10
ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatu... 69 6e-10
gb|EJK75661.1| hypothetical protein THAOC_02610 [Thalassiosira o... 69 8e-10
ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [B... 68 1e-09
ref|XP_003564203.1| PREDICTED: 60S ribosomal protein L39-like [B... 68 1e-09
dbj|BAK05636.1| predicted protein [Hordeum vulgare subsp. vulgare] 68 1e-09
ref|XP_006381897.1| hypothetical protein POPTR_0006s20280g [Popu... 67 2e-09
>ref|XP_004964674.1| PREDICTED: 60S ribosomal protein L39-like [Setaria italica]
Length = 51
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/44 (77%), Positives = 34/44 (77%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A KQRQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 7 FRIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum lycopersicum]
gi|565353539|ref|XP_006343687.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
gi|565366803|ref|XP_006350074.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
Length = 51
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = -1
Query: 231 NFGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
+F KKK A KQRQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 6 SFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>ref|XP_006338352.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum tuberosum]
Length = 51
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/44 (77%), Positives = 34/44 (77%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A KQRQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 7 FMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>gb|EMS51669.1| 60S ribosomal protein L39 [Triticum urartu]
Length = 76
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/70 (57%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
Frame = -1
Query: 285 LYPKFDLPIY-----LLSCV--AFTNFGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAK 127
L +F+LP+ LLS + F K+K A KQRQNRPIPYWIRMRT NTI YNAK
Sbjct: 6 LLQRFNLPLTRFPRSLLSSSQPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAK 65
Query: 126 RHH*HHTKLG 97
R H TKLG
Sbjct: 66 RRHWRRTKLG 75
>pdb|3J61|LL Chain l, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome gi|57471714|gb|AAW50988.1| ribosomal protein
L39 [Triticum aestivum] gi|326487816|dbj|BAK05580.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|326492163|dbj|BAJ98306.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326511663|dbj|BAJ91976.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|475538449|gb|EMT09251.1| 60S ribosomal protein L39
[Aegilops tauschii]
Length = 51
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/44 (75%), Positives = 34/44 (77%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F K+K A KQRQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 7 FRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>gb|EPS68963.1| hypothetical protein M569_05807, partial [Genlisea aurea]
gi|527205140|gb|EPS71099.1| hypothetical protein
M569_03658, partial [Genlisea aurea]
Length = 51
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/44 (75%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A KQRQNRPIPYWIRMRT N I YNAKR H TKLG
Sbjct: 7 FMIKKKLAKKQRQNRPIPYWIRMRTGNKIRYNAKRRHWRRTKLG 50
>ref|XP_004973151.1| PREDICTED: 60S ribosomal protein L39-3-like isoform X1 [Setaria
italica]
Length = 52
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/44 (75%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A K RQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 8 FQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 51
>ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group]
gi|514794821|ref|XP_004973152.1| PREDICTED: 60S
ribosomal protein L39-3-like isoform X2 [Setaria
italica] gi|75251551|sp|Q5SMI4.1|RL393_ORYSJ RecName:
Full=60S ribosomal protein L39-3
gi|55771364|dbj|BAD72315.1| 60S ribosomal protein L39
[Oryza sativa Japonica Group]
gi|55773789|dbj|BAD72572.1| 60S ribosomal protein L39
[Oryza sativa Japonica Group]
gi|125554313|gb|EAY99918.1| hypothetical protein
OsI_21918 [Oryza sativa Indica Group]
gi|125596264|gb|EAZ36044.1| hypothetical protein
OsJ_20351 [Oryza sativa Japonica Group]
gi|255676783|dbj|BAH93365.1| Os06g0181566 [Oryza sativa
Japonica Group]
Length = 51
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/44 (75%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A K RQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 7 FQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa Japonica Group]
Length = 118
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/44 (75%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A K RQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 74 FRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 117
>ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group]
gi|162459376|ref|NP_001105473.1| 60S ribosomal protein
L39 [Zea mays] gi|242063386|ref|XP_002452982.1|
hypothetical protein SORBIDRAFT_04g036030 [Sorghum
bicolor] gi|242094938|ref|XP_002437959.1| hypothetical
protein SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|356507420|ref|XP_003522465.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356515092|ref|XP_003526235.1| PREDICTED: 60S
ribosomal protein L39-2-like isoform X1 [Glycine max]
gi|356515112|ref|XP_003526245.1| PREDICTED: 60S
ribosomal protein L39-2 isoform 1 [Glycine max]
gi|356530615|ref|XP_003533876.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356556588|ref|XP_003546606.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|502125052|ref|XP_004498777.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|502132450|ref|XP_004501366.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|502172688|ref|XP_004515175.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|514719418|ref|XP_004954230.1| PREDICTED: 60S
ribosomal protein L39-like [Setaria italica]
gi|1710551|sp|P51425.1|RL39_MAIZE RecName: Full=60S
ribosomal protein L39
gi|55977802|sp|P51426.2|RL392_ORYSJ RecName: Full=60S
ribosomal protein L39-2
gi|306756293|sp|Q6KAJ8.2|RL391_ORYSJ RecName: Full=60S
ribosomal protein L39-1 gi|1177369|emb|CAA64728.1|
ribosomal protein L39 [Zea mays]
gi|47497037|dbj|BAD19090.1| 60S RIBOSOMAL PROTEIN L39
[Oryza sativa Japonica Group]
gi|113537925|dbj|BAF10308.1| Os02g0797200 [Oryza sativa
Japonica Group] gi|125541470|gb|EAY87865.1| hypothetical
protein OsI_09286 [Oryza sativa Indica Group]
gi|125541472|gb|EAY87867.1| hypothetical protein
OsI_09288 [Oryza sativa Indica Group]
gi|125584013|gb|EAZ24944.1| hypothetical protein
OsJ_08725 [Oryza sativa Japonica Group]
gi|125584015|gb|EAZ24946.1| hypothetical protein
OsJ_08727 [Oryza sativa Japonica Group]
gi|149390885|gb|ABR25460.1| 60S ribosomal protein l39
[Oryza sativa Indica Group] gi|195609506|gb|ACG26583.1|
60S ribosomal protein L39 [Zea mays]
gi|195609702|gb|ACG26681.1| 60S ribosomal protein L39
[Zea mays] gi|195609876|gb|ACG26768.1| 60S ribosomal
protein L39 [Zea mays] gi|195609896|gb|ACG26778.1| 60S
ribosomal protein L39 [Zea mays]
gi|195609966|gb|ACG26813.1| 60S ribosomal protein L39
[Zea mays] gi|195610006|gb|ACG26833.1| 60S ribosomal
protein L39 [Zea mays] gi|195610038|gb|ACG26849.1| 60S
ribosomal protein L39 [Zea mays]
gi|195611058|gb|ACG27359.1| 60S ribosomal protein L39
[Zea mays] gi|195612224|gb|ACG27942.1| 60S ribosomal
protein L39 [Zea mays] gi|195641468|gb|ACG40202.1| 60S
ribosomal protein L39 [Zea mays]
gi|195643810|gb|ACG41373.1| 60S ribosomal protein L39
[Zea mays] gi|195659485|gb|ACG49210.1| 60S ribosomal
protein L39 [Zea mays] gi|215767950|dbj|BAH00179.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|215769187|dbj|BAH01416.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|238011942|gb|ACR37006.1| unknown [Zea mays]
gi|238012804|gb|ACR37437.1| unknown [Zea mays]
gi|241916182|gb|EER89326.1| hypothetical protein
SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|241932813|gb|EES05958.1| hypothetical protein
SORBIDRAFT_04g036030 [Sorghum bicolor]
gi|413939321|gb|AFW73872.1| 60S ribosomal protein L39
[Zea mays] gi|552562415|gb|AFW64137.2| 60S ribosomal
protein L39 [Zea mays] gi|561010059|gb|ESW08966.1|
hypothetical protein PHAVU_009G089400g [Phaseolus
vulgaris] gi|561011513|gb|ESW10420.1| hypothetical
protein PHAVU_009G207900g [Phaseolus vulgaris]
gi|561028279|gb|ESW26919.1| hypothetical protein
PHAVU_003G159100g [Phaseolus vulgaris]
Length = 51
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/44 (75%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A K RQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 7 FRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays]
Length = 99
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/44 (75%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A K RQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 55 FRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 98
>ref|NP_001048392.1| Os02g0796900 [Oryza sativa Japonica Group]
gi|113537923|dbj|BAF10306.1| Os02g0796900, partial
[Oryza sativa Japonica Group]
Length = 50
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/44 (75%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A K RQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 6 FRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 49
>gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma cacao]
Length = 51
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/44 (75%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A K RQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 7 FMIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana]
Length = 51
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = -1
Query: 231 NFGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
+F KKK A K RQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 6 SFLIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatula]
gi|355492369|gb|AES73572.1| 60S ribosomal protein L39
[Medicago truncatula] gi|388513831|gb|AFK44977.1|
unknown [Medicago truncatula]
gi|388516927|gb|AFK46525.1| unknown [Medicago
truncatula]
Length = 51
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/44 (75%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A K RQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 7 FVIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>gb|EJK75661.1| hypothetical protein THAOC_02610 [Thalassiosira oceanica]
Length = 99
Score = 68.6 bits (166), Expect = 8e-10
Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = -1
Query: 315 GLRDKRF--VCQLYPKFDLPIYLLSCVAFTNFGSKKKPANKQRQNRPIPYWIRMRTANTI 142
G+ D F VCQ P + Y + + F +K+ A KQRQNRP+P WIR+RT NT+
Sbjct: 24 GIGDSAFPLVCQCIPVTNSCSYSVPQPSQKTFRTKRTLAKKQRQNRPLPQWIRLRTDNTV 83
Query: 141 HYNAKRHH*HHTKLG 97
YNAKR H TKLG
Sbjct: 84 KYNAKRRHWRRTKLG 98
>ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [Brachypodium distachyon]
Length = 97
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F K+K A K RQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 53 FRIKQKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 96
>ref|XP_003564203.1| PREDICTED: 60S ribosomal protein L39-like [Brachypodium distachyon]
gi|357145454|ref|XP_003573648.1| PREDICTED: 60S
ribosomal protein L39-like [Brachypodium distachyon]
Length = 51
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F K+K A K RQNRPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 7 FRIKQKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>dbj|BAK05636.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 51
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F K+K A KQRQ+RPIPYWIRMRT NTI YNAKR H TKLG
Sbjct: 7 FRIKQKLAKKQRQDRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>ref|XP_006381897.1| hypothetical protein POPTR_0006s20280g [Populus trichocarpa]
gi|550336708|gb|ERP59694.1| hypothetical protein
POPTR_0006s20280g [Populus trichocarpa]
Length = 75
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -1
Query: 228 FGSKKKPANKQRQNRPIPYWIRMRTANTIHYNAKRHH*HHTKLG 97
F KKK A K RQNRPIP+WIRMRT NTI YNAKR H TKLG
Sbjct: 31 FRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 74