BLASTX nr result

ID: Rehmannia25_contig00027982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00027982
         (438 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein...    51   9e-08

>ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like
           [Cucumis sativus] gi|449503744|ref|XP_004162155.1|
           PREDICTED: putative F-box/LRR-repeat protein
           At3g18150-like [Cucumis sativus]
          Length = 512

 Score = 50.8 bits (120), Expect(2) = 9e-08
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = -2

Query: 236 SKEKAAA*QIEKLVGYAISRKVKVLDLNFKGCGCLAPLKELYKLP-NVFSSNYLTELRLA 60
           SKE+  A ++   + +++ ++VKVLD++  GCG   P +  Y+LP ++ ++ YL EL L 
Sbjct: 127 SKERRMASELTTWIKFSLRKQVKVLDIDLLGCGLSEP-EVNYELPTSILTNKYLKELSLT 185

Query: 59  ACDIRSCGEIELQALRVL 6
            C I   G I+L +L  L
Sbjct: 186 GCGIEEKGRIQLTSLSKL 203



 Score = 30.8 bits (68), Expect(2) = 9e-08
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = -1

Query: 432 DNCVYRENE--DDDDVEICDY-EKLMDIVHKVWNHHDNNTLDKLHLRFAFAL 286
           D C Y ++   D ++ +   Y E+ ++++  V   H+   +D+ HL+FAF L
Sbjct: 60  DECAYHDHNIYDGENYDGPHYDERFLNLIRHVLILHERTIIDEFHLKFAFNL 111


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